Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <-------TEIL                                ----------->HVH21                     --------->ARR14(2)                           ------>ZmHOX2a(1)                   --------->HSFC1(2)                           ----------->RAV1(2)                   --------->HSFB2a(1)                          --------->At4g35610                   <---------HSFC1(2)--------->HSFC1(2)--------->ANAC58                       ------>ZmHOX2a(1)                  <---------TOE2(3)  <---------HSFB2a(1)    <---------ARR14(2)            <---------ARR11(3)                  <---------TOE1(3)  --------->HSFB2a(1)    --------->ARR14(2)            --------->ARR14(2)          --------->ANAC55(2)        <---------HSFC1(2)--------->ANAC58                   <---------ARR14(2)     <---------At4g35610      <---------AtLEC2      ------>ZmHOX2a(1)             --------->At4g35610     --------->At4g35610 <<<<<<<<<TBF1    <----------DOF2  <---------CCA1(2)--------->At4g35610    <- ----->MYB52(1)<---------REM1(1)--------->AtLEC2   --------->TOE2(3)<<<<<<<GRF7   <---------At4g35610   aaccgagagctcatgtgatgaaggttcttcttccatggaaacttctttgttttcctcaagcctatctcctgacaaattagcttcagctacaaaatcctct  7151900                                                                                         <---------ATERF1(1)                                                                                  <------NtERF2                                                                                 <---------At4g35610                                                                                 --------->ABI4(1)                                                                                 ------>NtERF2                                                                                 --------->LBD16                                                                                 <------NtERF2                                                                                --------->DEAR3(1)                                                                               --------->RRTF1(1)                                                                               --------->RAP2.3(1)                                                                              <---------ATERF1(1)                                                                              --------->ABI4(1)                                                                              ------>NtERF2 ------>NtERF2                                                                             --------->DREB2C(2)                                                                             <---------ALFIN1                                                                             --------->AtMYB61                                                                             ------->GAMYB --------->ANAC46                                                                             --------->ANAC46                                                                             --------->DEAR3(1)------                                                                            --------->MYB46(3) ------                                                                            --------->DEAR3(2) ------                                                                           <---------ATERF1(1) ======                                               --------->DEAR3(1)         <---------ALFIN1--------->MYB46(3)                                             --------->MYB52(1)           --------->AtMYB61--------->DEAR3(1)                                            ------->GAMYB                --------->MYB46(3)--------->DREB2C(2)                                            --------->AtMYB61           ------>ZmHOX2a(1)<---------At5g28300                                            <---------ALFIN1       --------->HSFC1(2)   <---------ALFIN1                  <---------ZAT2           --------->MYB46(3)      <---------HSFC1(2)--------->bZIP60(2)                  --------->ZAT2           <---------MYB52(2)      <---------HSFB2a(1)<-----------HVH21                <-----------RAV1(2)        <---------MYB111(2)     --------->HSFB2a(1)<-----------TGA1     --------->ATHB12                      <---------MYB55(2)    --------->ARR14(2) <------NtERF2    <---------YAB1--------->At4g35610     -------->P             <---------ARR14(2) --------->At4g35610   <---------TOE2(3)    ------>ZmHOX2a(1) ------>MYB46(1)       <------ZmHOX2a(1)--------->At4g35610 ----------->HVH21<---------At4g35610     ------>MYB83       <---------At4g35610--------->RRTF1(2)--- ---------DOF2  <---------ALFIN1      --------->HSFB2a(2)    --------->At4g35610--------->RAP2.3(2)   tctttgacgattgaagccccagcttcctcttctcttccttccccaaccaccgaagacgatttcagaggaacctcctccaccgccgcagcgtcaccgccaa  7152000                                                                          <---------GLK1(1)                                                                          --------->ARR14(2)           --------->LBD16                                                <---------ARR14(2)         <---------LBD16                                                 --------->GLK1(1)    --------->WOX13(1)                                                  <------ZmHOX2a(1)          -- --------->GLK1(2)     --------->At4g35610                  --------->ANAC58                 <------- >NtERF2 ----------->RAV1(2)                             --------->ARR14(2)             --------->ZAT14 ----->RAV1(1)      ---------->DOF2                     <------ZmHOX2a(1)<---------GLK1(1) ------>ZmHOX2a(2) --->MYB52(1)      <---------AHL20(2)           --------->MYB46(3)      ==========================HOX2a_HOX2a ====================RAV  <-------TEIL     ------>ZmHOX2a(1)--------->ANAC58      <-----------HVH21-- ---->GAMYB------>ZmHOX2a(1)            ------>ZmHOX2a(1)<---------ARR14(2)      <----------DOF2-----   cagaatcaatctcctgaatattaaaagctgcattttcttctcctcctccatctaccgaggaaacgacatcaacaggaatccccctttcactgatctcagg  7152100                                              ----------->RAV1(1)                                              <-----------HVH21                                             <---------ETT(1)                                         <---------ZAT2                                         --------->ZAT2                                         --------->At4g35610                                         <---------GLK1(1)                                       ------->PIF5                                       ------->MYC2                                       ------->MYC3                                       <-------MYC3                                       <-------PIF5                                       <-------MYC2                                   --------->ATERF1(1)                                   <---------SPL7                                  <---------DEAR3(2)      ------>NtERF2                                  <---------RAP2.3(1)     <------NtERF2                                  <---------DEAR4(2)     <---------SPL7                                  <---------ATERF1(1)    ----------->HVH21                                  ------>NtERF2         <---------ANAC46                                 <---------DEAR3(1)    <------NtERF2                                 <---------ATERF1(2)   --------->ATERF1(1)                                 <---------RAP2.3(2)   --------->At4g35610                                 --------->ATERF1(2)  <---------RAP2.3(1)                                 <---------RAP2.3(3) <---------DEAR3(1)                                --------->ATERF1(1)  <---------RAP2.3(2)             ------>ZmHOX2a(1)                 <---------DAG2------>NtERF2 --------->ANAC46             <---------MYB52(1)<--------             --------->ZAT18   <---------ATERF1(1)  --------->At4g35610 <---------ANAC55(2) ---------   --------->GLK1(1)           <---------RAP2.3(1)  <---------At4g35610 --------->ANAC46    --------- ------->ANAC58 --------->HSFB2a(1)<------NtERF2 ---------->DOF2        --------->ANAC55(2) <-------- --LBD16---------->DOF2        --------->LBD16------>NtERF2--------->SPL7--------->LBD16  ----------- ------->ANAC58------->TEIL   <---------DEAR3(1)<---------ALFIN1  <-----------GT1------>ZmHOX2a(1) <- ------>HVH21<---------ZAT18 <---------LBD16 ----------->HVH21 ------->TEIL--------->ARR14(2)------->GAMYB   gacggaattcaaaagcgcaccttctccttgctccggcggcacgagctccgacacagcggcggacgaatttacatccgtaactccttcctctccaacagac  7152200                             <-------GAMYB                            --------->MYB55(2)        <-----------RAV1(1) --------->MYB52(2)       ------->TEIL         <---------MYB46(3)       <---------TOE2(2)   <-------TEIL                                                        ------    --------->ANAC58    <------MYB83                                                           ------    --------->ANAC58    <------MYB46(1)                      <---------AHL20(2)                <----- -MYB55(2)             --------->MYB59                     <----------DOF2                 --------->YAB1 >DEAR3(2)     --------->LBD16                             --------->TOE2(3)   --------->ARR11(3) >MYB46(3)    <---------ANAC58                           <---------YAB1 --------->LBD16  --------->GLK1(2) -MYB52(2)    <---------ANAC46                          --------->ARR11(3)     <---------ARR11(3) >RAV1(1)     <---------ANAC58                          <---------ARR11(3)    --------->At4g35610 ----------ARR10<---------MYB52(1)               --------->YAB1       <---------ZAT14--------->YAB1   gaatcaacgcatgttgccgtgagattaggttcgttggaaacatgaacacattcagaattatctttaatcgactccagagaagctctctcagaatcagaat  7152300                                                                             --------->CCA1(2)                                                                            --------->ARR11(3)                                                <---------ALFIN1            <---------ARR11(3)                                               --------->ZAT14      ---------->DOF2           --------->DAG2                    --------->REM1(1)   --------->TOE2(3)          ---------->DOF2                    --------->ANAC46  --------->ARR11(3) --->GLK1(2)                 ---------->ID1--------->HSFB2a(2) <---------ARR11(3) --->ARR14(2)            --------------------->WRI1        --------->YAB1 ----------->ARR10 ----ARR14(2)    <------ZmHOX2a(2)         <---------HSFB2a(2)--------->RVE1(1)               <------   ccatgagcgagaaaaagggatcagtttcttcgtcttcttcgtcttctacaacactcgtccataaaaatctcaaagggagatattagaaaacaaaaaacga  7152400                     <----------DOF2                ---------->DOF2              ----------->HVH21             ------>ZmHOX2a(2)             =====================================HOX2a_HOX2a            --------->CCA1(2)            --------->At4g35610            <------ZmHOX2a(2)           <---------AGP1           <---------ARR11(3)           --------->ARR11(3)           --------->AGP1           <---------ARR14(2)                  --------->ARR11(3)           --------->ARR14(2)                <---------YAB1          --------->GLK1(1)                <------ZmHOX2a(1)     --------->AHL20(2) ----ID1  <---------GLK1(1)              <---------TOE2(3)       <---------AHL20(2) <------ZmHOX2a(2)   gaaaaccctaagagatctgaaagctttttaggcttagggttttgaggatgattttgtttttcggtgataaatttttgtctaaatggatcaaactgttttt  7152500                                                                                    <---------YAB1                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                 --------->ICU4    <---------AHL20(1)                                                             ------------>CBF      --------->AHL20(1)                                           --------->ANAC58 --------->ANAC58   <---------CCA1(1)                                      <----------ID1     --------->ALFIN1      <---------RVE1(1)                                  <------ZmHOX2a(1)    <---------At4g35610    <---------AHL20(1)                                 <------MYB83          --------->At4g35610    --------->AHL20(1)                ---------->DOF2  <------MYB46(1)     <-----------RAV1(2)<-----------GT1  <---------TOE2(3)         ----------->GT1       <--------P  --------->ANAC58 --------->ANAC58  <---------ARR11(3)       ---------->DOF2  ---------->DOF2<------ZmHOX2a(1) <---------REM1(1)    --------->ARR11(3)    <   tttttttaacaaagaaaaaaaagactgaaagaggtaggagaggacaagaacattttcaggtgaagcaattcttgttacaagatattatattaagttttct  7152600                         --------->At4g35610                         <---------At4g35610                       <-----------RAV1(2)              <---------ANAC58                                 --------->LBD16              <---------ANAC46                                 <---------TOE1(2)              <---------ANAC58                                <---------LBD16             ------>NtERF2                                    <---------ANAC46     <---------YAB1  <-----------HVH21         <---------AHL20(2)  <-------TEIL    ------------>CBF<------MYB83 <-----------GT1              --------->LBD16   --------->YAB1   <------MYB46(1)        ----------->GT1   <---------LBD16             <-----------GT1 ---------CCA1(2) <--------P----------->GT1<---------ZAT6 <-----------HVH21   --------->ZAT6 <-------   tcatatcacaattggtgcctgtaggtcagatggtttatctgtattgtgttaaaatgactgtgtcccgggttcaagtcttaacaatagtttttttcctttg  7152700                 <----------DOF2     --------->LBD16    <---------ANAC58             --------->ARR14(2)    <---------ANAC46             <---------ARR14(2)                --------->YAB1      <-----------GT1    <---------ANAC58     ---------->DOF2 <------ZmHOX2a(1)   <-----------GT1      --------->ATHB12 ---DOF2     --------->KAN4(2)   --------->GLK1(2)     ----------->GT1    --------------->AtSPL8   ttttttgtgtgtgtttattctttatactaaagaagaatccagaggataaactgaaaatggtttttacaaacatcattttgtacatgatttcaccctgaac  7152800  Previous    Next  AGI:  At2g16485.1    Description:  zinc ion binding. similar to neurofilament protein-related [Arabidopsis thaliana] (TAIR:AT3G05900.1); similar to retinitis pigmentosa GTPase regulator-like protein [Takifugu rubripes] (GB:AAG00554.1); contains InterPro domain Zinc finger, FYVE/PHD-type; (InterPro:IPR011011) Range:  from: 7150451    to: 7152304    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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