Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <-----------HVH21                                                 <---------ARR11(3)                                                 --------->ARR11(3)   <------NtERF2                              <---------TOE2(3)  ------>NtERF2                   --------->ARR14(2) --------HVH21                    <---------ARR14(2)                                   --------->AtLEC2 -------RAV1(1)              --------->AtLEC2---------->DOF2                      <----------DOF2 ---->ALFIN1          ----------->GT1  ---------->DOF2                     ---------->DOF2 ----------   gtggcaccaatagcacctcttgaggggttttatgcaaatccaaaagttaaagatgtcaattggaattggaagtaattcaaagggcttttatgcaaaagtt  7104300                                                                                                <----                                                                                                -----                                                                                                <----                                                                                                <----                --------->AHL20(2)                                                  --------->At4g35610                <---------AHL20(2)               --------->AHL20(2)                 <---------At4g35610             ----------->GT1                     <---------AHL20(2)           <-----------ARR10 -----          ---------->DOF2      <---------ZAT14  --------->YAB1             <---------GLK1(2)    -----     <---------------AGL15     --------->ZAT14  --------->AHL20(2)    <-----------HVH21       -------     --------------->AGL15--------->ZAT18 --------->ANAC58          --------->LBD16 --------->ZAT2 >DOF2--------->YAB1   ------->TEIL       --------->ANAC58         --------->LBD16  <---------ZAT2   tgtttttctcataaaagtttaaatggaccggactatagtctgggtcgcaattaaaatcgcttcaaattcccgagtcagagtctctcagcttcgaagcacg  7104400                                                                     <----------DOF2 ---PIF5                                                      <-----------GT1 -->MYC2                                               --------->ANAC58 ---MYC2                                               --------->ANAC58 ---MYC3                     <-----------GT1        --------->ZAT2  --------->TOE1(3) -->PIF5               ------------>CBF             --------->At4g35610 -->MYC3             --------->GLK1(2)              <---------At4g35610      <----------DOF2 -------- ----->OsbHLH66 ---------->DOF2                     <---------ZAT2  --------->TOE2(3)  --------->KAN4(2)   agcgagcgaggcaaaccaaaaagaatccaatttacatcatcttctccaaaattcagctcgaaattttcaacctttactggtttaatggacattctccaga  7104500                          --------->GLK1(2)                          ------->TEIL                         <---------GLK1(2)                       --------->ANAC46                 <---------At4g35610           ------>ZmHOX2a(1)                       <----------DOF2          --------->TOE2(3)                     <---------ARR11(3)          --------------->AGL15                 --------->ARR11(3)          <---------------AGL15                <------MYB46(1)         ----------------->AGL1                <------MYB83                               <---------SPL7         <-----------------AGL1               --------->MYB59                            <---------ANAC58 <---------ATHB12   --------->ARR14(2)   --------->AHL20(1)           --------->ZAT6     <---------ANAC58 =================HOX2a_HOX2a            --------->AHL20(2)         <-----------HVH21------->TEIL <------ZmHOX2a(2)  <---------ARR14(2)   <---------AHL20(2)        <---------ZAT6   <---------AtLEC2 ->HSFB2a(2)  --------->MYB52(1)        --------->AHL20(2)<---------YAB1      --------->AHL20(2) <---   ccgatcaagcttcctcaaacggtatacgaatctctctgtgaaaaaaattaggtctttcttctgattttagtgtcactacattatatgcatgtcgttccca  7104600              <-------GAMYB             --------->MYB52(2)         <---------YAB1           <---------MYB52(1)         --------->YAB1                    <---------MYB46(3)         <---------ZAT6               <---------ICU4           --------->ANAC58   <---------ANAC58   <---------GLK1(2)------>ZmHOX2a(2)--------->ICU4------------>CBF---------->DOF2<---------ANAC58 ------ALFIN1<---------MYB46(3)      <---------ATHB51          --------->ANAC58<----------DOF2<------   aacccgattttgtgttagttgatccaaatatttgaagaaattatgagtaattttgcaatgttctgaagccaaagttgttgtctttcttgtttttgtttat  7104700                                                                       --------->ANAC58                                             <---------ZAT18           --------->ANAC58            --                                      <---------YAB1                   ----------->GT1             --                                      --------->bZIP60(1)        ---------->DOF2              -------                                      ----------->HVH21 <---------KAN4(2)                    ------->TEIL          ----------->HVH21           <---------bZIP60(1)   <-------TEIL                  <---------WOX13(1) ---AHL20(2) <-----------RAV1(2)   <---------YAB1   --------->YAB1   ---------->DOF2   <---------YAB1   ttggagagtaatgtgacagatgggttttgtttacattgtgatgacagggtactataagaatgtgcataaaagaaagcaaaatcaagttgatgatggacct  7104800          --------->WRKY18(1)                                     <---------ANAC58         <-----------HVH21                                        <---------ANAC58  ---------->DOF2                --------->ATHB12               <---------YAB1       --------->At5g28300 ------->ANAC58                  <---------ICU4             <-----------GT1         ----------->GT1 ------->ANAC58             --------->ARR11(3)           ----------->GT1           <---------ZAT6 <-- ---->RAV1(2)           ---------->DOF2                <---------MYB52(1) <----------DOF2         ---   gaagcaaagcgggtcaagagttcagccaaagttattgattactctaacccatttgcagttagtaacatgcttgaagctttagatagtggtaaatttggga  7104900                                                                                     <---------ANAC55(1)                                                                                     <---------ANAC46                                                                                     <---------ANAC58                                       --------->ARR14(2)             <-----------HVH21        <-----                                       <---------ARR14(2)            --------->ANAC46<---------ANAC58                                  <------ZmHOX2a(1)              <-----------GT1 <---------ARR14(2)                                <---------TOE2(3)               --------->KAN4(2)--------->ARR14(2)     ---------->DOF2        --------->CCA1(2)               ----------->GT1   <---------ANAC58 <----- -------ZAT6           --------->At4g35610 <------MYB83     <------MYB83      <---------ANAC58 ------ ------>ALFIN1         <---------At4g35610 <------MYB46(1)  <------MYB46(1)   <---------ANAC46 ------   gtgttagtaaagagttggaagagatagctgatatgaggatggatttggttaagcgttctatttggttatacccgtcgctagcgtataccgtgtttgaagc  7105000                                                                --------->YAB1                                                             --------->YAB1                                                            <---------YAB1                                                            --------->ICU4                                                       --------->YAB1                                                      <---------YAB1                                        <---------AHL20(2)--------->YAB1                                       <---------AHL20(2)<---------YAB1                                       --------->AHL20(2)--------->ICU4                                      <---------YAB1  --------->ICU4                                 ----------->GT1    --------->YAB1        --------->ALFIN1 ----At4g35610                 <------MYB83        <---------YAB1       <---------bZIP60(2) ----ZAT2                      <------MYB46(1)     --------->ICU4       <---------ANAC46 --->At4g35610            <---------HSFB2a(2)    --------->YAB1<---------YAB1                <------- --->ZAT2                 --------->HSFB2a(2)   xxxxxxxxxxxxxxxxx>smallRNA(fl3)   ---------->DOF2   tgagaagacgatggataatcaacaggttgtggaaggtgttattaatttggatgatgatgatgatgatgatactgatgtggagaagaaagctctctgtgtt  7105100                                   <---------YAB1                                   --------->ICU4                  ------->TEIL                   ---                                 <---------At4g35610    <---------At4g35610    <---------ZAT14  <----         <---------At4g35610    <---------YAB1          <------NtERF2          <---------ZAT18 ------ ----RAV1(1)                <---------GLK1(2)           --------->At4g35610    --------->ZAT14-------   gttccttcgtcgtctgagattgtgcttcttgattctgatgatgaagacaatgagaggcagaggcctatgtatcagtttcagtctactcttgtacagcatc  7105200  Previous    Next  AGI:  At2g16390.1    Description:  DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1); ATP binding / DNA binding / helicase/ nucleic acid binding. similar to CHR34 (chromatin remodeling 34), ATP binding / DNA binding / helicase [Arabidopsis thaliana] (TAIR:AT2G21450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47208.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21271.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62867.1); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (In Range:  from: 7104720    to: 7108178    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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