Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   ------>NtERF2                                                                --------->RAP2.6(2)                                                           ---------->DOF2                                                         --------->ANAC58                                                         --------->ANAC58                                                         --------->ANAC46                                                      --------->ARR14(2)                                                      <---------ARR14(2)                                                     <---------RAP2.6(3)                                                     ------>NtERF2<---------ANAC46                                                    --------->RAP2.6(2)                        ----------->RAV1(1)         --------->DEAR3(1)     --------->ALFIN1   -------->P                 --------->DEAR3(2)   --------->TOE2(3)     <---------ZAT6     ------>MYB46(1)           <---------At4g35610   --------->ANAC55(2)     <-----------RAV1(1)--------->MYB52(1)     ---------->DOF2 <---------RAP2.6(2) --bZIP60(1)            ------>MYB83          <---------MYB52(1)--------->ZAT18 ->bZIP60(1)           --------->ANAC46      --------->TOE2(3)<---------At4g35610 >HVH21               --------->MYB46(3)     --------->TOE1(3)--------->At4g35610   attctcagtgttggctatatcaaacccaccagaacgagttagaacaacgttaagccgacccgaaagcggcctatacttaatgggaatagactcccaagtc  7091200                                                                         ------>ZmHOX2a(2)                                                                        <------ZmHOX2a(2)                                             ---------->DOF2           <---------ARR11(3)                                            <---------WRKY12           --------->ARR11(3)                                            <---------WRKY45           --------->AGP1              ------->GAMYB                 <---------WRKY38(1)        --------->ARR14(2)        --------->YAB1                     --------->WRKY18(1)        <---------GLK1(1)      <-----------HVH21                 --------->ALFIN1       --------->ARR11(3)     --------->ANAC46            --------->At4g35610           <---------ARR11(3)    --------->MYB46(3)          --------->GLK1(2)          ---------->DOF2<-----------RAV1(1) <-----------GT1              <------ZmHOX2a(1)         <----------DOF2<---------ARR14(2)        <---   tttctacccatcacaacagcatttttcttagaggaatctgaagtggtcaaagtaatgtctttaaagaacttgagatctgttggcaaattccatggcaatt  7091300                                                                                 ----------->HVH21                                    --------->REM1(1)                         <---------ZAT6                                  ----------->RAV1(1)                       <---------ANAC46                                --------->At4g35610                       --------->ZAT14                                <---------At4g35610   ------>ZmHOX2a(1)   <---------ZAT14    <----------DOF2      --------->MYB52(2)    <--------P          --------->ANAC58     <-----------HVH21   <---------ICU4     <----------DOF2  --------->MYB46(3)          --------->ANAC58   <<<<<<<<<SUP --------GT1      <---------CCA1(2) --------->MYB46(3)<----------DOF2     --------->ZAT18<---------YAB1   tcccatctttaccaatacccatttctttagttgcagcaacaacaacttggtaagtcctttgaggctctgaagcaagtgtagtggtgacactgtcattgag  7091400                                  --------->ARR11(3)                                  <---------ARR11(3)                                  <---------ARR14(2)                           --------->TOE1(2)                           --------->TOE2(3)                  --------->GLK1(1)                <---------YAB1                  <---------GLK1(1)  <---------ANAC58        ----------------->AGL1    --------->ARR14(2)                            ---------->DOF2       >>>>>>>>>>>>>>>>>LFY--------->TOE2(2)       --------->ICU4  <---------ANAC46   <---------MYB46(3)--------->YAB1  <---------ANAC58 <---------YAB1      ---------->DOF2  ----------   agtagttgttgccattgtggaaatcaaaaccttggagatacttgcaatagatgatgatgaattgcgatggctagtacaaagccaaagcagagactgtgaa  7091500                                                      ----------->GT1                                                    --------->GLK1(2)                                               ---------->DOF2                            --------->AHL20(2)--------->YAB1                                       --                  <-------TEIL<-----------GT1<---------ATHB12                 <---------------AtSPL8                <---------GLK1(2)            <<<<<<<<<ARR2                   --------->DAG2   <------ZmHOX2a(2) ->GT1         --------->At4g35610         --------->WOX13(1)              ---------->DOF2  <--------   aatcaaacacaagagtcagattcatatgaattaaactatccaaaacaatcaaagaatcgaaatttgaaacaaatagcaaaagggtatggagaagagatca  7091600                                                                                           ----------                                                                                          <---------TOE1(3)                                                                                          <---------TOE2(3)                                                                                        ---------->DOF2                                                                                     <------MYB46(1)                           <---------ARR11(3)                                        <------MYB83                           --------->ARR11(3)              <---------GLK1(2)        --------->MYB46(2)           ---------->DOF2 --------->GLK1(2)         ---------->DOF2                --------->MYB111(1) ----------->HVH21        <---------GLK1(2)       --------------->AGL15             --------->MYB59 ------->ZAT14    ---------->DOF2      *TSS   --------->ARR14(2)                --------->DAG2   <--- -GLK1(1) <---------AHL20(2)  <----------DOF2 <---------ARR14(2)               ---------->DOF2   <---   gtactgaccgatttaaaggagaaaggaagaatctttgaggggtttgcaaatacccaaaagagattatcgaaaacccagaagaaaagtaggtaaaggttac  7091700                                                                                          --------->DAG2                              <------ZmHOX2a(1)                                 ---------->DOF2                             <----------ID1                                     =====================                          ---------->DOF2                                    ----------->GT1                 --------->ANAC55(2)            <---------LBD16             <-------TEIL ---------->DOF2                 <---------ANAC55(2)         ---------->DOF2              <---------ARR14(2) ->GT1           --------->ANAC58            --------->CCA1(2)            --------->ARR14(2) ------DAG2      --------->ANAC58         ----------->ARR10       --------->ARR14(2)     ============ -------DOF2    <---------LBD16    <------ZmHOX2a(1)      ---------->DOF2 <---------GLK1(2)         -   tttttttttttttttagtcacggagttgaaaaggacaggaagagaagataagcgggggagaaaagagggaaacgccgattcgtaaaacgcttaaagtaga  7091800   --------->ALFIN1 --------->O2 <---------O2                                ----------->GT1 --------->TGA1a                           <---------ANAC46 <---------bZIP60(2)                      --------->ALFIN1 <---------TGA1a                         <-----------HVH21 <---------ANAC58                    --------->MYB52(1) <---------ANAC58               ---------->DOF2                     <---------LBD16 ==========================================bZIP_DOF               <---------ARR14(2) ==========bZIP_DOF          <------ZmHOX2a(2)               --------->ZAT18 --------->ARR14(2) ==========bZIP_DOF         --------->ARR11(3)       <---------TOE2(3)--------->LBD16 ------>TEIL--------->YAB1  <---------ARR11(3)     ---------->DOF2--------->ARR14(2)   cggacgtgtctctatcaaactaaaatagaagatcgaaagtaagggtcgggttttaaaggtaagaccactatccggacactatccactactgcgaagtgcg  7091900                                                                     ------->TEIL                                                                  <---------YAB1                                                                  <---------ANAC55(2)                                                               --------->ICU4                   <----                                                             --------->YAB1                   -------                                  <----------DOF2           <---------AHL20(2)        <---------AHL20(2)                           <-----------GT1                  --------->AHL20(2)        --------->AHL20(2)                     ----------->GT1                      <----------DOF2            --------->AHL20(2)                     --------->YAB1                       --------->TOE2(3)        <---------ICU4                    <---------ATHB12                  <---------GLK1(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   aaccatggttttagatagaccaatagttatttcaatcttttttgttttgaacatagatttctttaattatgtatgttgaacttactaattaatatggact  7092000                                                                                                    x                                                                                                    x                                                                                                    <                                                                                                   <x                                                                                                   <x                                                                                                   xx                                                                                                 <xxx                                                                                               xxxxxx                                                                                               xxxxxx                                                                                               xxxxxx                                                                                               <xxxxx                                                                                               <xxxxx                                                                                              <xxxxxx                                                                                             xxxxxxxx                                                                                             xxxxxxxx                <---------YAB1                                                               <xxxxxxx              <-----------GT1               <---------ARR11(3)                          <-----------GT1       --------->AHL20(2)                   --------->ARR11(3)                         <xxxxxxxxxxxxx    <---------ICU4                  --------->YAB1    --------->ATHB12               <xxxxxxxxxxxxxxx ------DOF2  <<<<<<<<<MYB98       --------->AHL20(2)<---------WOX13(1)      <---------LBD16  xxxxxxxx >TEIL <---------AHL20(2) <----------DOF2   <---------GLK1(2) --------->AHL20(2)  ----------->GT1xxxx   ttctcatatttatatgttactattccctcttttcaaaataatagtagatttttgaatgatttaagtaaatgacaagttttcggagagaaattacagacta  7092100  Previous    Next  AGI:  At2g16370.1    Description:  THY-1 (THYMIDYLATE SYNTHASE 1). Identical to Bifunctional dihydrofolate reductase-thymidylate synthase 1 (THY-1) [Arabidopsis Thaliana] (GB:Q05762;GB:Q9SIW4); similar to THY-2 (THYMIDYLATE SYNTHASE 2) [Arabidopsis thaliana] (TAIR:AT4G34570.1); similar to CM0216.390.nc [Lotus japonicus] (GB:BAF98221.1); similar to Bifunctional dihydrofolate reductase-thymidylate synthase (DHFR-TS) [Includes: Dihydrofolate reductase ; Thymidylate synthase ] (GB:P51820); similar to bifunctional dihydrofolate reductase-thymidylate synthase [Zea mays] (GB:NP_001104916.1); contains InterPro domain Bifunctional dihydrofolate reductase/thymidylate synthase; (InterPr Range:  from: 7088865    to: 7091639    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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