Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <---------TOE1(2)    --------->TOE2(1)    --------->TOE1(1) ------->P ----->MYB46(1) ----->MYB83 ------->MYB55(1) ------>DEAR3(1)                  <-----------------------TaNAC69(2) -------MYB111(1)         --------->ATHB12                       <-----------GT1            --------- ------>AtMYB61----------------->AGL1                         <---------AHL20(2)          --------->At4g35610 -------MYB111(2)        --------->ICU4                 <---------DAG2              <---------YAB1 -------MYB46(2)         <---------YAB1                 <----------DOF2        <---------AHL20(2) ------>MYB46(3)      ----------->GT1                <---------ALFIN1         --------->AHL20(2)   ccaacctcgtagtattgtccaaatgggataattggtgaggtaagagagttgaacaacactttatttattcccattccatatataatacgattagatgaca  7067300                                      --------->ANAC46               --------->SPL7                                      --------->ANAC58              --------->MYB52(1)        --------->YAB1            <-----------HVH21 --------->AHL20(2)--------->ANAC46     ----------->RAV1(1) ------>NtERF2--------->ANAC55(2)          <---------SPL7   <------NtERF2   --------->ARR14(2) --------->ANAC55(1)   <---------ICU4  <---------ATERF1(1)   <---------ALFIN1  <---------CCA1(2) --------->YAB1  ------>NtERF2    <---------ARR14(2) --------->ANAC58     --------->ICU4                    --------  ----------->RAV1(1)  --------->MYB46(3)------->TEIL    --------->YAB1                    <---------ARR11(3) <---------ETT(2)<---------DEAR3(2) <---------DOF5.7(2) <---------AHL20(2)           <-----------GT1 -->HVH21  <---------ARR11(3)     --------->DOF5.7(2)<---------AHL20(2)         <---------GLK1(2)   agggcgacaacaataacttcggttccccaccctctcgttcacgcatctctgctattaaataatcatcaccatacggagtccagaatttcacaagataaat  7067400                                                      <--------P                                                     <---------ANAC58                                                     <---------ANAC58                                                     <-------GAMYB--------->ANAC58                                                    --------->MYB52(2)                       --------->ZAT6               <------MYB83  --------->ANAC58                    --------->YAB1                  <---------MYB46(3)                   <---------ATHB12                 <------MYB46(1)--------->TOE2(3)                  --------->ANAC58                 <---------AtMYB61                  --------->ANAC58                <---------MYB52(1)                 --------->WOX13(1)        <-------TEIL           ----------->GT1               <---------ZAT18            <--------P--------->MYB55(2)---------->DOF2               --------->ZAT18           <-------GAMYB<---------WOX13(1)   --------->LBD16             --------->ZAT18            <---------MYB46(3)  --------->At4g35610               <------             <---------ZAT18           <---------TOE2(2)   ------>ZmHOX2a(2)                --------- ->AHL20(2) <---------ZAT6   <----------DOF2   ------>ZmHOX2a(2) ------->TEIL             --------->ARR11(3)   tgggatgttttttagtgtgcaatcaacactacttttaaacggaggttgatccgttggttgatcgctgaacgtaaaaccggcattgaacgatatatcatga  7067500                       --------->ARR11(3)                     <---------KAN4(1)                     --------->KAN4(1)                            --------->ANAC58                    <---------KAN4(2)                --------->At4g35610                --------->LBD16                    <---------WRKY18(1)    <------ZmHOX2a(1)              --------->At4g35610            --------->RAP2.6(2)  --------->ANAC58              <---------LBD16                --------->ANAC58   --------->MYB52(1)       <---------MYB59 <---------ARR11(3)------->GAMYB       --------->ANAC58       --------->TOE1(3)                --------->MYB46(3)   --------->ANAC58           <---------ARR11(3)       --------->TOE2(3)              ----------->RAV1(1)    --------->ANAC46       ---------->DOF2 <---------YAB1<---------ANAC46      --------->REM1(1)  --------->At4g35610   --------->GLK1(2) ---YAB1   ---------->DOF2          <-------TEIL  ----------->HVH21      <----------ID1 --------->ARR11(3) >YAB1<---------ANAC55(2)------>ZmHOX2a(2)   --------->ANAC58--------->ANAC55(1) <---------HSFB2a(2)   gttttgatacctaaacagcgggaatgatctagtggaggtacaacagaccgccatgacctgcagacggaacggaagaggacaatctcgaaagatgtctcaa  7067600                                                                               --------->ANAC55(2)                                                                               --------->ANAC58                                                                               --------->ANAC46                                                                               <---------ANAC55(2)                                                                               --------->ANAC58                                                                              ------->TEIL                                                                          <---------------AtSPL3                                                                          ------>ZmHOX2a(2)                                                                          --------------->AtSPL8                                                                         --------->CCA1(2)                                           <---------ARR14(2)            <------ZmHOX2a(2)                                           ------>MYB83                 --------->AGP1                                           ------>MYB46(1)              <---------AGP1                                           --------->ARR14(2)           --------->ARR11(3)                                          --------->WOX13(1)            <---------ARR14(2)                                      <------ZmHOX2a(1)                 <---------ARR11(3)                                --------->ANAC58                       --------->RVE1(1)                <---------HSFB2a(2) --------->ANAC58                  ----------->ARR10          ----                --------->HSFB2a(2) --------->ANAC58                ---------->DOF2            <----- --------->PCF2 >>>>>>>ZML2     --------->ANAC58            <-------TEIL--------->ARR14(2)     ------   gatgacccacgattagttctagtaagtcattcggaagcaaggaccaatctgccatagttagattcaaatgtaaagatctgtacgtaaaactgaagaatta  7067700      <------ZmHOX2a(1)                     <------------CBF      --------->YAB1                      <---------AHL20(2)             <-----------GT1    <---------TOE1(3)                   <---------AHL20(2)     --------->ARR11(3)                   <    <---------TOE2(3)                  --------->AHL20(2)      --------->AHL20(1)    ------------>CBF ------>DOF2                         <---------ARR11(3)       <-----------TBP     <-----------GT1   < ----AHL20(2)        <-----------TBP --------->ARR11(3)   <---------TOE2(3)    --------->YAB1      -- --->AHL20(2)    ----------->GT1   ----------->ARR10 <----------DOF2  <---------GLK1(1)  <---------ATHB12   aaagttaaggataatgaagaagtatatatatcacagtaagattttatattgctctcttttaagaatatatagatttcacagttataacccaattaagagt  7067800                                     <---------ICU4                                    --------->AHL20(2)                                    --------->ICU4                                    <---------ATHB51                                    <---------AHL20(2)           ---------->DOF2        --------->YAB1       --------->TOE2(3)        <---------AHL20(2)     <---------AHL20(2)         --------->AHL20(2)  --------->ARR11(3)    <---------AHL20(2)  <---------ARR11(3)  <---------AHL20(2)  <---------ICU4     --------->AHL20(1)                                                            xx  <---------AHL20(1) --------->ARR11(3)                            <---------AHL20(2)              <-  --------->AHL20(1) <---------AHL20(1)    <---------ZAT6         --------->AHL20(2)      <----------DOF2 ---------AHL20(1)   --------->AHL20(2)    ----------->GT1<-----------GT1               xxxxxxxxxxxxx ---------AHL20(2)   <---------ARR11(3)--------->ICU4    <---------AHL20(2)          xxxxxxxxxxxxxxxx ------->YAB1        <---------AHL20(2)<---------YAB1------>ZmHOX2a(1)           xxxxxxxxxxxxxxxxxxxx   ataatattttcttaaaagtataatatatttttaaaaaaataattagtgtaaaatcctattttatcttatataatatgacaaggtttttctaactttgcct  7067900                                     <---------ANAC58                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <---------ANAC58                         <---------ANAC46                         <---------ANAC58  <---------ICU4                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      <----------DOF2<---------ANAC58                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  --------->AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------AHL20(2)                <---------AHL20(2)          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->AHL20(2)        <---------AHL20(2)      <---        <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <---------RVE1(1)        <---- xxxxxxxxxxxxxx>smallRNA(i)----------->HVH21   <---------AHL20(1)      <---------CCA1(1)        ----- --------YAB1 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    <---------GLK1(2)         <---- xxxxxxxxxx>smallRNA(le3)--------->ANAC55(2)  --------->AHL20(2)      <---------ARR11(3)       ------ xxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)              --------->ARR11(3)       ------ x>smallRNA(l2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                  <---------TOE2(3)  <-----------GT1   cataatacgacttttggcattatactttcgtgacacatttcttactcattaaattttagtttgacattctaagatttttttttttaatttcactctatta  7068000                              --------->ZAT18                                   ------>NtERF2                     <----------DOF2                                            <---------DDF1 <-----          --------->AHL20(2)  <---------ZAT18                                  --------->RAP2.6(2) <---------AHL20(2) ------>ZmHOX2a(2)                                          --------->DEAR3(1) --- ------YAB1        <------ZmHOX2a(2)                                       --------->DAG2  --------->At5g28300 -----AHL20(1)    --------->ARR14(2)                                      ---------->DOF2 ----------- ---->AHL20(1)    <---------ARR14(2)    --------->ZAT6             --------->REM1(2)    <---------ORA47(1) -----AHL20(2)    <---------ARR11(3)  <-----------GT1           <---------ANAC58----------->RAV1(1) --->YAB1 <---------AHL20(2) <---------ZAT6   <----------DOF2   <---------ANAC46<<<<<<<<<<<<<<<<<LFY --->AHL20(2)     --------->ARR11(3)<---------MYB52(2)          <---------ANAC58<---------RAP2.6(3)   tatttagtttgataaattgggatcttttttagtgtgcaattaacactgcttttaaacggacattggccgtgtaacgaaaagccgacattggacggtataa  7068100                                                           --------->ZAT2                                                           --------->At4g35610                                                   --------->ANAC58                                                   --------->RAP2.6(2)                                                   --------->DREB2C(2)                     --------->LBD16              --------->DEAR3(2)    --------->ANAC58                     ----------->GT1              --------->MYB46(3)    --------->ANAC58                   <---------At4g35610           --------->SPL7<-----------RAV1(2)                   <---------LBD16             ----------->HVH21        ------>ZmHOX2a(2)                   --------->At4g35610         ------->GAMYB  <---------At4g35610                  --------->MYB52(1)          --------->MYB46(3)       <------ZmHOX2a(2)          <--            >>>>>>>>>RAP2.2                   <---------MYB52(2)      --------->ARR14(2)      ------- ------GT1<---------ARR11(3)                --------->MYB52(1)--------->At4g35610             <------ ------>TOE2(3) ---------->DOF2           <-------TEIL     <---------At4g35610        --------->TOE2(3) >GT1     --------->ARR11(3)     --------->MYB52(1)--------->ANAC58   <---------ARR14(2)  ---------->DOF2   cctttgttttgatatctaaacagcggaaaattatctaatggaggtacaacggaccgccatgagctgcagacggatcgcaagttgacaatctcaaaagatg  7068200  Previous    Next  AGI:  At2g16290.1    Description:  F-box family protein. Identical to Putative F-box protein At2g16290 [Arabidopsis Thaliana] (GB:Q9SIX0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G16300.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66619.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 7066012    to: 7067655    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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