Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------------AGL15                                              <---------ARR11(3)                                        <-------TEIL                                      <---------MYB52(1)       <------ZmHOX2a(1)  <---------ZAT14     --------->ARR11(3)                     <---------ALFIN1 ->ZmHOX2a(1)             --------->ZAT14 ---------->DOF2                  ---------->DOF2--------->DOF5.7(2)   aaactgctaggaactaaactagtaagactgttctgagacagattcaaagttcttaaactagtgagattaccaagagtaaaaggaacaacaccgttaacag  7049600                                            ------>MYB46(1)                                            ------>MYB83                                            --------->ANAC46                                          <---------MYB46(2)                   <---------SPL7                                          --------->MYB46(3)           --------->TOE1(3)                                          --------->AtMYB61           --------->ANAC58                                          <---------MYB111(1)         --------->ANAC58           <------ZmHOX2a(2)             --------->ANAC58           <---------DOF5.7(2)           --------->CCA1(2)             --------->ANAC58          --------->ARR14(2)          <---------ARR14(2)             --------->ANAC46         --------->DOF5.7(2)         -------          --------->ARR14(2)           --------->ZAT6            --------->LBD16              -------          --------->AGP1           <---------MYB52(2)           --------->ANAC46 --------->SPL7          <---------ARR11(3)    ------->GAMYB --------->MYB46(3)--------->LBD16--------->LBD16-------          --------->ARR11(3)   <---------MYB111(2)             <------NtERF2 <---------LBD16  <------ --------->ANAC46              <---------MYB52(2)              <---------LBD16 ----------->HVH21 --------->ANAC58              --------->MYB46(3)        <----------TaMYB80-------->P   --------->AHL20(2) --------->ANAC58              <---------MYB55(2)  <-----------RAV1(2)--------->ZAT6----------->GT1--   aacacgaactaagatccaatacttccaatgccaacaaactaacaccaaaccactcaggtatagtccccggtaacgctaacccggacgcgttaaaatacga  7049700                                                                                          --------->YAB1 -->ANAC46                          <---------ANAC46                        <---------ARR11(3) -->ANAC58                 ------->GAMYB     <---------ANAC58               --------->ARR11(3) <----- -->ANAC58              ----------->RAV1(1)  <---------ANAC58           --------->LBD16  <---------ATHB12 ----ID1              <------ZmHOX2a(2)     --------->At4g35610  ==========================HOX2a_HOX2a ------->MYB52(1)   <------ZmHOX2a(1)       <---------At4g35610  ------>ZmHOX2a(1)  ------>ZmHOX2a(2)   caaacgagttagattacgaagaggatcaacagagaattgtgggtttagcttaccaattcttgttctcctaaacccagagatattgatcccaatgatacta  7049800                                                     --------->GLK1(2)                                                     <---------ARR14(2)          --------->TOE1(2)                                   <-----------HVH21 --------->ARR14(2)        <---------ARR11(3)                         --------->YAB1             --------->WOX13(1)  ---------->DOF2                        <---------ATHB12      <---------WOX13(1)     --------->TOE1(3)                        --------->MYB46(3) <---------AHL20(2)        --------->TOE2(3)    --------->ANAC58                       --------->ANAC46    --------->AHL20(2)       --------->ZAT6        --------->ANAC58 ------GT1            --------->WOX13(1) <----------DOF2      ------>ZmHOX2a(1)--------->ARR11(3)   ccattctcacattgtatacctctccaatcaacacaagggtcacctttaattggccaatctgttcctcttaaccctaaagaagacctgagattaagcaaaa  7049900                                                              --------->YAB1                                                              --------->ANAC46                                                            ------>MYB83                                                            ------>MYB46(1)                                     ----------->RAV1(1)  <---------MYB111(1)                                    --------->MYB46(3)    <---------MYB46(2)                                 --------->MYB46(3)       <---------MYB59                                ------>MYB83              --------->MYB46(3)                                ------>MYB46(1)     --------------->AtSPL8               <---------ZAT18                               ----------->RAV1(1)  --------->ZAT6         --------->ANAC58        <-                           <---------WRKY18(1)      --------------->AtSPL3 --------->ANAC58  <-------   tgagtttctcactgaatcgactctgtgtttgaccaacaacaacacagtcgaagaacagtaccaaacacaacaacaacaagacaaaacccaatgcgcttct  7050000                XXXXXXXXXXXXXXXXXXXXX>MIR833-5P              <---------ANAC58                  <---------ICU4                                  -----         --------->ATHB12                   --------->ZAT6                                      -----         <---------ICU4              --------->MYB46(3)                                    <---------        <---------ATHB12         <---------ATHB12    --------->ANAC58                     <------ZmHOX2a(1)       -------->P       ------------>CBF<---------ATHB12                               <---------LBD16 ---------DOF2<---------ANAC58   ----------->HVH21   --------->ANAC58                <-----------GT1 ---DOF2--------->MYB46(3)   ------------>CBF   --------->YAB1                    <---------AHL20(2)   tctttgatcaaccattgcttatcaaactcaatccaatgacccatcaacactcatcacccaaacccagagagagacagagactatttttttcaggatttaa  7050100                   ------->GAMYB                   --------->TOE2(3)                   --------->TOE1(3)                 -------->P                                                                        --                ------->GAMYB  <-----------GT1                                                     ==      <---------MYB59          --------->MYB52(1)                    --------->GLK1(1)             --      ------------>CBF      --------->YAB1                ---------->DOF2                          --     --------->ANAC46     --------->AHL20(2) <----------DOF2        --------->ARR14(2)            <--     --------->ANAC58    --------->YAB1     =================HOX2a_HOX2a                          ===     --------->ANAC58    --------->AHL20(2) ------>ZmHOX2a(2)       <---------ARR11(3)           ---- ---->ANAC58   <---------MYB55(2)         <---------ARR11(3)        --------->ARR11(3)           <--- ---->ANAC58   --------->MYB46(3)         --------->ARR11(3)        <---------ARR14(2)    <---------MYB52(1) --ARR10       <---------MYB111(2)   <----------DOF2  <------ZmHOX2a(1)                  <-----------HVH21   gcaaaatacccaattcaacaaccctaataaaaataacgtctttcgatctttagagaggaagaaagagacagatatcgaactgggtttgctctgttactgg  7050200              ------>MYB83              ------>MYB46(1)              <---------TOE1(2)              -------->P             ------>ZmHOX2a(1)            <---------MYB111(2)        <---------At4g35610        --------->At4g35610     <---------At5g28300 ---------->CBF ===================HOX2a_HOX2a --------------->AGL3 ---->ZmHOX2a(2)                                                                        ----------->GT1 ----ZmHOX2a(2)              ---------->DOF2                                          ---------->DOF2 ===================HOX2a_HOX2a          <----------DOF2                     <---------YAB1 ----->ARR14(2) --------->TOE2(3)   <---------ALFIN1                      <---------AHL20(2) ------ARR14(2) --------->TOE1(3) ------->TEIL <----------DOF2        ------>ZmHOX2a(1)--------->DAG2   atccaattacagctcctaccttcacagacattaaagcacctctctttctctttctctctctctctctaaatcctaatttatgagaagaaaaagtagaaat  7050300                                                     --------->ARR11(3)                                           <---------ANAC46                                           <---------ANAC58                                           <---------ANAC58                               --------->ARR14(2)                                           ----------->GT1         ---------->DOF2        <---------ARR11(3)          ------>ZmHOX2a(1)           <---------MYB46(3)<----------DOF2                   --------->ARR11(3)         --------->TOE1(3)        --------->ATHB12   --------->GLK1(2)              >>>>>>>>>TBF1         --------->TOE2(3)     ----------->GT1       <---------ARR11(3)          >>>>>>>>>TBF1    <-- --------->ZAT6               --------->DAG2        --------->RVE1(1)         >>>>>>>>>TBF1<------ZmHOX2a(2) <-----------GT1             ---------->DOF2        --------->CCA1(1)  ---------->DOF2    <---------ARR14(2)   ttttcactaatccttaaaatcagacaaaacaaaaagtgatttgttgagtgaaaaaaatctttagagagagaaagaaagaagaagaagaagaagatcgaga  7050400                                                                               <-----------GT1     <-                                                                       <---------YAB1              <-                                                                    <---------AHL20(2)             <-                                                                 <---------AHL20(2)                --                                                                 --------->AHL20(2)                <-                                                                <---------AHL20(2)                 --                                                                --------->AHL20(2)                ---                           --------->ANAC58                     <---------AHL20(1)  --------->ARR14(2)                         <---------ALFIN1             <---------HSFC1(2)    <---------ICU4      -----                         --------->ZAT6               --------->HSFC1(2)   <---------AHL20(2)  ------                --------->ZAT14                       --------->HSFB2a(1)  --------->AHL20(2)  <-----                <---------ZAT14                       <---------HSFB2a(1) <---------YAB1   --------->AHL20(2)                <---------ETT(2)                  --------->ANAC46  --------->AHL20(2)     <---------AHL20(2)              --------->ZAT14  ------>ZmHOX2a(1)  --------->ANAC58  <---------AHL20(1)    <---------WOX13(1)         --------->MYB46(3)--------->ANAC58       --------->ANAC58  --------->AHL20(1) <---------YAB1   <---------TOE2(3)  ----------->HVH21         <---------AtLEC2--------->AHL20(1)  <---------ARR14(2) -------MYB46(3)--------->ETT(2)            <----------DOF2    --------->AHL20(2)   --------->GLK1(2)   ttgttgagataacaactgtagactgtgacactcctctctctctcgtctttgcaagaaacttcgaaattaatttattattaattacaaatctgattaatta  7050500  Previous    Next  AGI:  At2g16250.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT4G39270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47625.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kinase; (InterPr Range:  from: 7046764    to: 7050015    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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