Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           --------->ALFIN1                                                         <-----------RAV1(1)                                               <---------CCA1(2)                                           ------>ZmHOX2a(2)                                           ===================HOX2a_HOX2a          --------->ANAC58                ====================HOX2a_HOX2a          --------->ANAC58        <---------TOE2(3)    ------>ZmHOX2a(1)          --------->ANAC46        --------->MYB59   ------>MYB83       <-----------HVH21  --------->DAG2         ---------->DOF2  <------ZmHOX2a(2)         <---------ANAC55(2)  <---------CCA1(2) ---------->DOF2  <---------HSFB2a(2)    <---------ARR11(3)     <-------GAMYB  <---------REM1(1) ------>LBD16     --------->HSFB2a(2)    --------->ARR11(3)    ----------->GT1 --------->ALFIN1<----- ----->ANAC46 <----------DOF2     <---------TOE2(2) ------>MYB46(1) --------->ANAC55(2)--------->TOE2(1)   cgaaaaagctaaacgcctttctataagtatagcacttaggtaagatcgtataccttcctgtgttggggttacatatcagaggtgtagcctcgtatcgatc  7038100                          <---------ARR14(2)                       <---------ANAC58                           <-------TEIL                       --------->ANAC55(2)              --------->YAB1                       <---------ANAC55(2)             <---------YAB1 <---------TOE1(2)              --------->ANAC58           --------->AHL20(1)     <---------GLK1(2)              --------->ANAC58           <---------ARR11(3)     --------->ARR11(1)           <------ZmHOX2a(2)             --------->ARR11(3)  <---------WOX13(1)          --------->ARR11(3)--------->MYB46(3)       --------->YAB1<---------ANAC46   <---------AHL20(2)  <---------ANAC58 --------->CCA1(1)  --------->ATHB12 <---------ANAC46   --------->AHL20(2) <-----------------------TaNAC69(2)<---------ICU4<---------TOE2(2) -ZmHOX2a(2)  --------->ANAC46          --------->RVE1(1) <---------YAB1   --------->ATHB12   accatataaatagatcaagccagaggcgtaaccaattgaaaaatatcttggggtattatcatgatagattcgtagattgtttggagataacttcatatga  7038200                                                                                                  <--                                                                <---------ALFIN1                  <--                                                               <---------MYB55(2)                 <--                                                               --------->MYB46(3)              <-----                                                              --------->ANAC46               --------                                                              <---------ALFIN1               <-------                                                       <-----------ARR10                     <-------        <---------MYB46(3)                        ---------->DOF2    <---------MYB52(1)      <-------       <--------P                  ----------->HVH21   --------->GLK1(2)                     <-------      <-------GAMYB              --------->HSFB2a(2)   --------->ARR14(2)                    <-------     <---------MYB46(3)    ------>NtERF2     --------->At4g35610--------->ANAC46             --------   <---------At4g35610  ------>NtERF2  ------->GAMYB  <---------GLK1(2)                      <-------   --------->At4g35610 --------->DEAR3(1)  <------ZmHOX2a(1)<---------ALFIN1                <--------   aattcagcggttgctacaagagtcgacgacgacttctctaaccgaggagatgaaaagaatctccacacaccgttttgtacgatggcaaataagaggcgtg  7038300           ------>ZmHOX2a(2)           ===============HOX2a_HOX2a          <------ZmHOX2a(2)          ================HOX2a_HOX2a         <-----------ARR10         <---------ARR14(2)  --------->At4g35610  <---------At4g35610 -------ANAC58 -------ANAC46        --------->MYB46(3) -------ANAC58     <------ZmHOX2a(1)                                    --------->ANAC58 -NtERF2 --------->ARR14(2)                                --------->ANAC46 ->ALFIN1<---------AGP1                                   --------->MYB46(3) --ANAC58<---------ARR11(3)                     <---------ATHB12        --------->ANAC55(1) --bZIP60(2)  <-----------HVH21                ------>MYB46(1)          --------->ANAC55(2) --ANAC46--------->ARR11(3)                    ------>MYB83<---------ALFIN1  <---------ATHB12 --ANAC58--------->ARR14(3)                  <---------MYB111(2)        <---------ANAC55(2) --O2    --------->GLK1(2)                   <---------MYB111(1)        --------->ANAC58 ->O2    <---------ARR14(3)                  --------->MYB46(3)         --------->ANAC46          --- --TGA1a<------ZmHOX2a(1)                    <---------MYB59       ----------->HVH21           <----- ---------------TaNAC69(2)                   <---------MYB46(2)  <----------DOF2     --------->ANAC46   gcttagcagaggatctggtcaggaacaactctttgaaatatggactaccaaacattgatgcccaccgctttgacacgcaatgaaacctcgcgactgactt  7038400                                                                  <------ZmHOX2a(2)                                 --------->KAN4(2)                =======================HOX2a_HOX2a                               <------ZmHOX2a(2)         <---------ICU4                              --------->ARR11(3)         --------->ATHB12            <---------ARR14(2)                              <---------ARR11(3)        <---------YAB1             ----------->ARR10       --------->YAB1   ==============HOX2a_HOX2a     --------->YAB1--------->TOE1(2)--------->ARR14(2)       <---------ICU4   <------ZmHOX2a(1)     ----------->GT1<---------------------WRI1 ------->DOF2         --------->LBD16 <---------MYB52(1)--------->ICU4      >>>>>>>>>TBF1         --- -----DOF2           <-----------RAV1(2) <---------TOE2(3)--------->RAP2.6(3)     <------ZmHOX2a(1)   taaaggcaatcttgacaaaacctccaggatgagatcattcgttaagaaatgtgaattcatgatggccgatcgaacgaagaagaaggagatttgttaagac  7038500                                                         <---------YAB1                      --------                                                        --------->TOE2(3)                  ==========                                ---------->DOF2    ------------>CBF                        --------->ANAC46                        ------>MYB46(1)           ------>MYB83     --------->DAG2          --------->TGA1a                        ------>MYB83              ------>MYB46(1) ===================================bZIP_DOF                      --------->TOE2(3)         --------->TOE1(2) ---------->DOF2    <-----------GT1 ------>AHL20(2)      <---------MYB59  <---------HSFB2a(2)  --------->HSFB2a(2)  ------>ZmHOX2a(1)   ttaaatattaagacacctagataacctaattaacaaaagccctagaaaaacctagcaatcttatagaataaagtagggttctccttataactcacttcac  7038600                   --------->MYB52(1)                <---------ANAC55(2)            <-----------HVH21         <---------ANAC58                                           --------->AHL20(2)              <         <---------O2   <---------HSFB2a(1)                         <---------AHL20(2)             --         --------->O2  <XXXXXXXXXXXXXXXXXXXXMIR319C             <---------AHL20(2)                 <-         <---------ANAC55(2)                            --------->YAB1                             <-         <---------ANAC46                            <---------HSFB2a(2)                      -------         <---------ANAC58<----------DOF2             <---------------AGL15                  <--------         <---------TGA1a--------->HSFB2a(1)          --------->HSFB2a(2)                    ---------         ===========================bZIP_DOF         ================================================         <---------ANAC55(1)                  <---------ICU4    --------->AHL20(2)    --------->YAB1-         --------->ANAC55(2)               --------->YAB1       --------->AHL20(1)    --------->TOE2(3) ->ZAT14<-------TEIL  <------ZmHOX2a(1)   <-------TEIL ----------->TBP<-----------GT1<---------YAB1-- ===================================bZIP_DOF <---------YAB1    --------->AHL20(2)   <---------TOE2(3)   cagaagttgatacgtgtcacctaaggactttccttctctccaaattcatcattttctataaaaaaaaaaattaaacaacttagttttatgttaatgcaca  7038700    <-----------GT1    <---------AHL20(2)                                                                     <---------ARR14(2) ---------AHL20(2)                                                               --------->AHL20(2) ------->AHL20(2)                             <---------DAG2                     <---------AHL20(2) --------AHL20(2)                             <----------DOF2                <---------AHL20(2) --------AHL20(1)                             --------------->AGL15          --------->AHL20(2) ----->CBF                                 <-----------GT1                  --------->AHL20(2) -ZAT18        --------->ANAC46         <---------ICU4                      <---------AHL20(2) >ZAT18       <-------TEIL             --------->ICU4      <---------ICU4   <---------AHL20(1) =============================================================MADS_MADS     --------->AHL20(1)   <--- -------->AHL20(2)                 ------------>CBF ----------->GT1  --------->GLK1(2)     --------->GLK1(2) ------->AHL20(1)             ------------>CBF<---------------AGL15  <---------ARR11(3)    --------->ARR14(2)   atttatttacttcaaatacatcactattttccaacaatacaatgtttactttatttgttaaaaattagcaaaatctaatttaataaatgatcaaatctgt  7038800                                                                                    <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                --------->ATHB12                                                                                ----------->GT1          <-----------GT1                                 ----------->GT1      <---------YAB1         <-----------GT1 --------->ARR11(3)             <----------DOF2 <---------AHL20(2)      <---------AHL20(2) <---------ARR14(2)  <-----------GT1            <---------YAB1              <    <---------YAB1       <---------ARR11(3) <---------AHL20(2)         <---------AHL20(1)  --------->GLK1(2) <---------YAB1          --------->ARR14(2)--------->AHL20(2)          --------->AHL20(2)  --------->ARR14(2) ---------------------ANAC81          <-----------GT1<-----------GT1   --------->AHL20(1)  <---------ARR14(2)   tttcttattattttccccttctaacaatatctgtattttgttacatttaatcttttaactttgtaaaatgcaatataatagatgattaaatcaaatctgt  7038900                                   <---------YAB1                                  <---------AHL20(2)                                            -----                         --------->ARR11(3)                             <---------YAB1         ------           <-----------GT1        --------->AHL20(2)                    <---------AHL20(2)     ------          <-----------GT1<---------ARR11(3)      <---------DAG2        --------->AHL20(1)   ------->TEIL         <-----------GT1--------->RVE1(1)        <----------DOF2       <---------AHL20(1)   ---------      <---------AHL20(2)--------->CCA1(1)     <-----------GT1          --------->AHL20(2)   <--------    <---------YAB1    --------->YAB1--------->YAB1                     <---------AHL20(2)  <---------CCA1(2) <---------YAB1       --------->AHL20(2)  --------->TOE2(3)           --------->YAB1  --------->ARR14(2) <---------AHL20(2)  <---------ATHB51     <----------DOF2       --------->GLK1(2)     <---------ARR14(2) ---------AHL20(2)   <---------ATHB12     --------->TOE1(3)     <---------ARR11(3)    --------->GLK1(2)   atttttattattttccccatccaataatatctgtattttaataactttaaactttttgaatttcaaaatctaatataatagatgatcaaatctgtatcct  7039000  Previous    Next  AGI:  At2g16220.1    Description:  F-box family protein. Identical to Putative F-box protein At2g16220 [Arabidopsis Thaliana] (GB:Q8S8C7); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT2G16450.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60955.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 7037237    to: 7038460    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version