Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                                  ---                                                                                                  <--                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                                                                                           --------->GLK1(1)                                                                                          <---------ARR11(3)                                                                                          --------->ARR14(2)                                                                                          <----------                                                                                          --------->ARR11(3)                                                                                          <---------ARR14(2)                                                                                     =============HOX2a_HOX2a                                                           <------ZmHOX2a(1)         ==============HOX2a_HOX2a                                             --------->ANAC58              --------->YAB1 <---------AGP1 ------TEIL    ------->TEIL                  --------->ANAC58 ---------->DOF2 --------->MYB52(1)  --- -->DOF2  <---------AtLEC2        --------->ZAT14 <---------MYB52(2)   --------->YAB1<------ZmHOX2a(1)   atgcaaaataatgcatgaatgctcacattcagacagagaactaagtgaagcaactaaaacaggagaaagacaatgaaaaataacagaggacagatctcat  7035700                                                                                              =======                                                                                              ------>ZmHOX2a(2)                                                                                             ========                                                                                             --------                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                               <---------MYB52(1)                                                                              <-------GAMYB <--------                                                                          ------------>MYB.PH3(2)                                                                         <---------HSFB2a(1)---------                                                                         --------->HSFC1(2) <--------              <-------TEIL                                               --------->HSFB2a(1)--------- -------HSFC1(1)                  ------>ZmHOX2a(1)                      <---------HSFC1(2) --------- ------>HSFB2a(2)             <---------ARR14(2)            --------->ZAT14  --------->MYB52(2) -------HSFB2a(2)             --------->ARR14(2)            <---------ZAT14  ----------->GT1--------- -ARR10 ---------->DOF2       ------->TEIL                 --------->ALFIN1 <-------TEIL    <-------- ------>HSFC1(1)     ---------->DOF2          ----------->GT1          ---------->DOF2    -----------   ctagaagaaacaaagatgcaaaataaagcatgaatcctcacattcagacagaaaaatacgagtgtagaatgaagaaagttcgttacatagagaagatctg  7035800 =================HOX2a_HOX2a =================HOX2a_HOX2a ->CCA1(2) -AGP1 -ARR14(3) >ARR14(2) -ARR11(3) >ARR11(3)                                  <-----------GT1 >ARR14(3)           ---------->DOF2 --------->DAG2 >GLK1(2)     --------->GLK1(1)     ---------->DOF2 -ARR14(2) ------>ZmHOX2a(1)     --------->ANAC46           --------->YAB1                ----------- >ARR10<-----------GT1         <-----------GT1 <---------DAG2                    <----------ID1   ---   tgagttttttttcctgatacccataaagacaatttacgaaaagtttcaacctttccaaactaaaataacaagtgtcaaagtttaagacaaacccctgtta  7035900                                                                      <-----------GT1                              --------->ANAC58                      <-------GAMYB       ---------->DOF2        --------->ANAC58                     <---------MYB46(3) >RAV1(2)         <---------ICU4         --------->AHL20(2)        --------->MYB111(2) ------->DOF2    <---------ATHB12 ----------->RAV1(1)           ------------>MYB.PH3(2)       -------   caaagaaccgaaagtttcaatctttccaaactaagccaacaaatttaacaaggagaagagtttagaaggttgttaccttgttttctgaagaaacatttat  7036000                                  <----------DOF2                                <---------ZAT18                                                     =                           <---------ANAC58             --------->TOE2(2)                           <                    <----------DOF2                <---------ARR11(3)                          ======                  --------->HSFC1(2)               --------->ARR11(3)                          ------                  <---------HSFC1(2)          --------->DEAR3(1)       <---------CCA1(2)    ---------         --------->TOE1(3) <---------ANAC58  --------->ANAC58  --------->MYB52(2)           ---------     --------->MYB46(3)  <---------YAB1<----------DOF2 --------->MYB46(3)                  --------->MYB46(3) -->YAB1 --------->TOE2(3)<---------ICU4     --------->ANAC58 <-------TEIL           <---------At4g35610   actctgaacaaccttgaagaagctttcattcttgcgctcttctttgcaccgaagataaccagcgttcgtagccatctctctaattcaagctcacccacaa  7036100         --------->TGA1a         ===================bZIP_DOF ==================bZIP_DOF                                        ------>MYB83          <<<<<<<<<SARD1 ----------DOF2                     --------->ARR11(3)             ------>MYB46(1)       <<<<<<<<<CBP60g ==================bZIP_DOF         <---------ARR11(3)           <---------MYB59        ------>MYB46(1) ---->DOF2       <----------DOF2    *TSS                         --------->AtMYB61      ------>MYB83- -->RAV1(1)<---------CCA1(2)       <---------CCA1(2)          <------ZmHOX2a(1)       <---------MYB59 >ANAC46 --------->O2            ------>ZmHOX2a(1)   <----------DOF2         <---------GLK1(1)-------   agcttttgctctcgtctctctttcacactctcttcctatatctctctccctctctcttttgtaaggaccaaacctgttgaaatctctaccaaatttcaaa  7036200                      <---------TOE2(3)                     ---------->DOF2                           <---------DAG2                 ----------->GT1                             ------->TEIL            ---------->DOF2                          <---------bZIP60(1)  --------->YAB1      <-------TEIL   <---------DOF5.7(2)         <-----------HVH21  <-----------HVH21     --------->GLK1(2)<---------TOE1(3) <---------------AtSPL8 <----------DOF2                     <- --------->DOF2  <---------MYB46(3)     <---------ICU4<-----------HVH21   --------->ANAC55(1)  ------ --->DOF2  <---------WRKY38(1)         --------->ICU4--------->bZIP60(1)  --------->ANAC46     <-----   ggaaaagattcagtcaaagtggttaaagttagaactgagaaataagtacaatgtgaggtcatgtactttttgtcacacataactcttatatgtgtttctt  7036300                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)                                                      <---------AHL20(2) --------->YAB1                                                      <-----------GT1--------->AHL20(2)    --------->AHL20(2)        <---------ICU4     <---------YAB1      --------->YAB1 --------TOE2(3)              --------->YAB1   <---------MYB46(3)   <---------ATHB12      <---------ARR11(3) --->TOE2(3)     <------MYB46(1)           <------ZmHOX2a(1)<---------YAB1  <---------AHL20(2) -----DOF2       <------MYB83<---------ATHB12  ----------->GT1<-----------GT1         <---------At4g35610   taatgtataaatacaatgttggtattgtccaattaagacgagggaggagttgttattaacttattatccaattaaaaataaaatgttcagaagatgtatt  7036400                                                    <------------ATHB5                                                    <--------ATHB1                                                    <--------HAHB4                                                    <---------ICU4                                                    --------->YAB1                                                    --------->ATHB12                                       --------->YAB1                         --------->TOE2(3)         --------->ICU4                         --------->TOE1(3)         <---------ATHB12                       <---------ARR11(3)          --------->AHL20(2)                       --------->ARR11(3)--------->ZAT6                   --------->ZAT2             <---------AHL20(2)       <---------YAB1--------->ATHB51      --------->At4g35610             --------->AHL20(2)      <---------AHL20(2)  <---------At4g35610               --------->ZAT18          <---------AHL20(1)         --------->AHL20(2)  --------->At4g35610--------->ALFIN1          --------->AHL20(1)        --------->YAB1 <---------ATHB51     <-----------RAV1(2)<---------ZAT18   ctatttatctaatatataattttaaaatcttaaatagattataatactagtcaataattagctcagaaacaaaatcaggtgggacaatatttgtggacca  7036500                    --------->At4g35610                    <---------At4g35610              --------->ATHB12             <---------YAB1           <---------ANAC58           <---------ANAC58                <-----------HVH21           <---------AtLEC2              <---------------AGL15    <---------AHL20(2)                <-----------GT1   --------->AHL20(2)      --------->CCA1(2)                                                   <-----   aagtataaaatttgcatgattcaactgagagatgagcatttttctagtcagagcaaaactttggttctcagtcttagtactagtctcgttgcataagttg  7036600  Previous    Next  AGI:  At2g16210.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G35310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82372.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 7033845    to: 7036136    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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