Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            ----------------------->TaNAC69(2)                                         ------>ZmHOX2a(2)                                        --------->GLK1(1)                                        <------ZmHOX2a(2)                                        <---------GLK1(1)                      <---------MYB52(1)                  <------NtERF2        --------->ARR11(3)                  --------->MYB52(1)             <-----------RAV1(1)       <---------ARR11(3)                  ------>NtERF2             <---------AtMYB61      --------->SPL7                        --------->DEAR3(1)         <----------DOF2          <---------SPL7                          <---------ALFIN1         <---------DAG2          <---------MYB46(3)                      --------->MYB46(3)         <        <---------ANAC58        --------------->AtSPL3              ------->GAMYB <----------DOF2   <        <---------ANAC58   --------->CCA1(2)          <---------TOE1(2)  <---------MYB55(2)      ----   ======================RAV    --------->ALFIN1      ------>MYB83 --------->ANAC46              <---   <---------AtLEC2        --------->ARR14(1)         ------>MYB46(1)  --------->ANAC46         <----   <---------ANAC58       <---------ARR14(2)          <---------TOE2(2)--------->ANAC58         <----   ----------->RAV1(2)    --------->ARR14(2)        --------->TOE2(2)  --------->ANAC58         <----   <---------ANAC58       --------->ARR11(1)   <-----------HVH21  -------->P<------NtERF2       <----   attttgcctggctttttggtggcccatggatacggtggtacgatctccctgtcacctacgtttctttcaaccccagccaccggtctttttgagttacgac  7028300        ----------->RAV1(2)       ------>ZmHOX2a(1)    ---------->ID1              <-------GAMYB ---------ANAC58                --------->At4g35610 ---------ANAC58          <---------ANAC46                            --------->ALFIN1 --->PIF5 <-----------RAV1(1)   <---------At4g35610          <-----------RAV1(2)               <----- ----PIF5 ------>ZmHOX2a(1)--------->LBD16            ----------->RAV1(2)                     <------ -----ANAC58             <---------LBD16             -------->P      <------ZmHOX2a(1)     <---------TOE1(3) -----ANAC58           ---------->CDC5            <------NtERF2<---------At4g35610    --------->At4g35610 -----bZIP60(2)      --------->AtMYB61       <---------DEAR3(1)<-------GAMYB   <------ZmHOX2a(1)    - -----ANAC46    --------->SPL7 --------->ALFIN1  ------>NtERF2 --------->At4g35610    <---------At4g35610   gtgcttgtcctcctggtggacgacctctgcggggagttgccaaggccacggtggcaacctggttcagttgaggagggggaaggacttcttctgaaggttg  7028400                                        --------->ZAT2                                        <---------At4g35610                                     <-------TEIL                                     --------->SPL7                                   <---------SPL7                                   <------NtERF2                                  <---------DEAR3(2)                                 --------------->AtSPL3                 --------------------->WRI1                                 <---------DEAR3(1)                  --------->YAB1        ----------                                <---------ABI4(1)                 --------->WOX13(1) <---------MYB52(1)                                <------NtERF2                    --------->MYB46(3) <-------GAMYB                              <---------RAP2.3(3)               <---------KAN4(2)  <---------ANAC58                              <---------RAP2.3(2)          --------->ALFIN1        <---------ANAC58 --TEIL                       <---------DEAR3(1)         <---------ANAC58          <---------ANAC46 --P                       --------->ALFIN1              <---------ANAC58     --------->MYB52(2) -------->DAG2------>ZmHOX2a(1)------>NtERF2             <---------ANAC46     <---------MYB46(3)   ataaggcaatggggtcctcactgagacgtttgggggcggtacagcttgctcaagagcctgcgtgggaacaatcacatggtttgttccgttggcaaaagaa  7028500                             <------MYB46(1)                             <------MYB83   <---------AGP1                             <---------ANAC58     --------->bZIP60(1)                             <---------ANAC58     <---------bZIP60(1)                             <---------ANAC46<------ZmHOX2a(2)                            <------MYB46(1) --------->ARR14(2)                            --------->MYB59 <---------ARR14(2)                                      -                   ==================================HOX2a_HOX2a                                    -                   <------ZmHOX2a(1)        <---------ARR11(3)                                      -                <------ZmHOX2a(1)           --------->ARR11(3)                                    ---                =====================================HOX2a_HOX2a                                 ----                ====================================HOX2a_HOX2a                                  ----          <-------GAMYB     <---------MYB46(3)------>ZmHOX2a(2)    <---------bZIP60(2)           <---         <------MYB46(1)    <------MYB83    <-----------ARR10    <---------WRKY18(1)           <-----  <-----------HVH21=================================HOX2a_HOX2a ----------->HVH21             <------ZmHOX2a(1) <---------bZIP60(1)      --------->ALFIN1  --------->GLK1(2) <---------ANAC58              <-------- --------->bZIP60(1)      <--------P<---------ANAC46          <---------AtLEC2          <----------DOF2 >DOF2   <------MYB83    <-------GAMYB     <------ZmHOX2a(1)  <---------ANAC58   ------>ZmHOX2a(1)<--   gtcatgtcatttggttgaggaggagagggttgggtattttgtggaggatctgatgtcaagagttgcatgacctcgccttgttcctcttgtctttgaggaa  7028600                                                                            --------->YAB1                                                                      <-----------TGA1     <---------MYB52(1)                                               <-----------HVH21 ----->MYB83                                                        ---------->ID1 ----->MYB46(1)                                              --------->ARR14(3) ------->P                    <---------ANAC58               <---------ARR14(3)              -------- ------>AtMYB61               <-------GAMYB                  --------->ARR11(3)       ---------->DOF2 ----->MYB46(3)               <---------ANAC58   <----------ID1------>ZmHOX2a(2)      <---------ZAT14 ----->DEAR3(2)   <------------MYB.PH3(1)   --------->TOE2(3)--------->ARR14(2)    *TSS--------->DAG2 ------MYB52(2) --------->MYB52(1)<---------ANAC46           <---------ARR11(3)    ----------->GT1 ----ARR14(2)   <---------DOF5.7(2)         --------->TOE1(3)<---------ARR14(2)  <---------ANAC46 -TOE2(3)  <---------YAB1    <---------MYB46(3)---------->DOF2<------ZmHOX2a(2)  ----------->GT1 -------MYB111(1)<---------At5g28300     <-----------GT1     --------->AGP1<---------ATHB12  <-------   ccaacccgtttttctcattaacggttttttttggttgtgtatataaccttaaagacaaatcgagatcttcgtcgtcactcatgaggtgtaaagtgatgat  7028700                                                             <---------YAB1                                                           <--------HAHB4                                                           <---------AHL20(2)                                                           --------->ATHB51                                                           --------->YAB1                                                           -------->HAHB4                                                           <---------ICU4                                                           -------->ATHB1                                                          --------->ICU4                                                          <---------ATHB51                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                  ------->TEIL                                      <                                             --------->CCA1(2)                               <-------                                            --------->ARR14(2)      ----------->GT1        --------->ARR14(2)                    <-----------TBP         <---------ARR14(2)  <---------YAB1             <---------ARR14(2)                ----------->GT1             --------->ARR11(3) <---------AHL20(2)         <------ZmHOX2a(1)        ------------>CBF                    <---------ARR11(3) <---------AHL20(1)        --------->ICU4 ->ICU4 <---------ZAT14               <---------DOF5.7(2) <---------YAB1    --------->MYB52(1)      - --YAB1<<<<<<<<<<<<<<<<<LFY       <---------MYB46(3)  --------->AHL20(2)  <---------AHL20(2) <-------   gaagaatgactacaatggtggtatatatagacttgtttgttaacgagatatgtatatttaattattatttttgtaaataaacgggtttgtaaggatttgt  7028800                               <---------WOX13(1)                            <---------AHL20(2)                                              ---------                            --------->AHL20(2)                                             <---------YAB1        --------->ANAC46   --------->AHL20(2)                                            --------->ATHB51  <----------DOF2        --------->ARR11(3)                                             <---------YAB1 ---------At4g35610      <---------ARR11(3)                                           <---------ICU4 --------AtSPL8       <---------TOE2(3)                      --------->YAB1           --------->YAB1 -------->At4g35610  ---------->DOF2                        <---------YAB1           <---------YAB1 --------AtSPL3   --------->TOE2(3)                  <---------ZAT14       <---------AHL20(2) <------   acagctttcaacgtaatccacattaaagatttaattgattttgtcaaatatgtagtatagttttgataactgagtttttatttgtttattattattgtta  7028900                  <---------DAG2                  <----------DOF2   --------->ARR11(3)   <---------ARR11(3)  <---------GLK1(1)  --------->GLK1(1)  <---------CCA1(1)                                                        <---------YAB1  <---------YAB1  <---------RVE1(1)                  ----------->GT1             <---------YAB1          --------->YAB1  --------->RVE1(1)                  <---------ANAC46          <--------HAHB4            <---------ICU4  --------->CCA1(1)            <---------ARR11(1)              <---------ICU4           --------->ICU4 --------->ARR11(3)            --------->ARR11(3)             --------->ICU4    <-----------GT1 <---------ARR11(3)       <-----------GT1            --------->YAB1<-----------GT1      <---------ATHB51 -->GT1      --------->YAB1   <---------CCA1(2)     <---------ATHB12      --------->AHL20(2) ---YAB1<---------YAB1<---------AHL20(2)      <-----------GT1 <---------YAB1<---------AHL20(2)   taagatatctatgaataatactttttattttcaaatctttcgtaaatttatccaaacatgagtcattattatccatttttatttacaacaattatgaaaa  7029000                                                                                                    <                                                                                                    <                       <------MYB46(1)                                                     ----------                    <---------ANAC58                                                       --------->WRKY12                    <---------ANAC58                                                       --------->WRKY38(1)                 <------ZmHOX2a(1)                                                   <---------DEAR3(1)            --------->ANAC46                                                  --------->MYB55(2)    -            --------->ANAC58                                                  <---------MYB46(3)    <            --------->ANAC58 <---------HSFB2a(2)                             --------->ALFIN1      <-       ----------->HVH21     --------->HSFB2a(2)            <----------DOF2  <---------DEAR3(1)    --      <-----------HVH21<------MYB83                <<<<<<<<<TBF1             <---------AtMYB61 ------ --------->MYB52(1)--------->ZAT2             <---------MYB52(1)<-----------GT1 <---------ANAC46 <---   aaaaaacgggtcacacgaaggagcttggtttctcgacgttgtatatcggtttcttcttccttcttttcacaactctacggtggtgggatggcgatgaccc  7029100     <---------DAG2    <------NtERF2   ------>NtERF2   <---------ATERF1(1)  --------->RRTF1(3)  --------->RAP2.3(2)  --------->RAP2.3(3)  <---------ALFIN1  --------->RAP2.6(2)  --------->DREB2C(2)  --------->RRTF1(2)  --------->DEAR3(1) --------->ORA47(2) --------->ERF1 --------->RAP2.3(1) --------->DEAR4(2) --------->RRTF1(1) <------NtERF2 --------->RAP2.6(1)                                                                         <------- --------->ATERF1(1)                                                                         -------- ---------RAP2.3(1)                                                                        ---------- ---------RRTF1(1)                                               --------->O2          --------->ATHB12 ->HVH21                                                         ----------->HVH21    <---------YAB1 ----->NtERF2                            <---------AtMYB61       --------->ANAC58 --------->At4g35610 ---------ATERF1(1)                     <---------MYB52(1)       --------->ANAC58 <---------At4g35610 --------DEAR3(1)                   --------->MYB52(1)           --------->bZIP60(2)<----------DOF2 ------->ANAC46                   ----------->HVH21              --------->ANAC46 <------NtERF2 ----->RAV1(2)                ------>ZmHOX2a(1)             <---------ARR14(2)    <---------ZAT2 ------ATERF1(1)            ----------->RAV1(2)             --------->ARR14(2)    --------->ZAT2   <-   tgcgccgccttctctgttcgactcccgtcttcctgactcaccggtggtcttattcaagcgagtttccacgacacagtggaaggcagctttgattagattt  7029200  Previous    Next  AGI:  At2g16190.1    Description:  similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT1G49330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47655.1) Range:  from: 7027575    to: 7028683    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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