Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <-------TEIL                    <----------DOF2                                        <<<<<<<<CAMTA3                 ---------->ID1          ------            ---------->DOF2           --------->ANAC55(2)             <-----------GT1          ------           --------->AHL20(2)         <---------ANAC55(2)    <----------DOF2           --------->HSFB2a(2) --------->ALFIN1         --------->AHL20(2)                <------------------------ANAC81    ------ ------>ATHB12<----------ID1   --------->AHL20(2)    <----------DOF2<------------------------ANAC81 ----->ICU4<---------AHL20(2)  <---------AHL20(2)   <------------------------ANAC81    <---------HSFB2a(2)   tgagtggtccaaattaaagacaaaaccaaaaaataaaatcacgcgttcatcttctctttctctctttttttttttctctttctctcgttctcgagacatg  7012500                                                                                                 ----                                                                                                 <---                                                                                              -------                                                                                           --------->TOE2(3)                                                                                          --------->ATHB12                                                                                          <--------HAHB4                                                                                          <---------ICU4                                                                                         <---------YAB1                                                                                         --------->ICU4                                 ------>ZmHOX2a(2)                                     <---------ICU4                               --------->ARR14(2)                                      --------->YAB1                               <---------ARR14(2)                                     --------->ICU4-                        ------->GAMYB                                         <-----------RAV1(1)----                      ------>MYB46(1)                                       --------->At4g35610 ----- --->AtLEC2           ------>MYB83 --------->At4g35610                      <---------At4g35610 ----- --->ANAC58         --------->AtMYB61                          --------->GLK1(1)      <---------YAB1< --->ANAC58      <-----------GT1<------ZmHOX2a(2)   --------->CCA1(2)       ----------->RAV1(2) <----   caaaacaaacacaaaaacttcaccatccgactcgatccgatgaattgagaagagatttgagtcggaaattcttcgttcatctgtggtcatcatcattaac  7012600             <---------DEAR3(1)    <------ZmHOX2a(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->MYB52(1)     <---------ARR14(2) --->GAMYB--------->AtMYB61       --------->ARR14(2) ------------AGL15                --------->AGP1                                        --------->At4g35610 -->MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       --------->CCA1(2) -------->ARR14(2)  <---------ARR14(2)                                  <---------ARR14(2) ----------->AGL15  --------->ARR14(2)                           <---------ARR14(2)     <---------ZAT2 ------------>AG    <---------ARR11(3)                           --------->ARR14(2)     <---------At4g35610 ------------>AGL1  --------->ARR11(3)                          ------>MYB83           <---------ATERF1(1) ---------ARR14(2) --------->GLK1(1)     <------ZmHOX2a(2)      ------>MYB46(1)       <---------RAP2.3(3) -------------AGL3 <---------GLK1(1)    <---------ARR11(3) <-----------GT1      --------->ATHB12  xxx   cgaatatggagaccatcggcgatatctggttcaccagatcgagatcagaaaatcgaagaattcaccaaatcggagatttgagttattggctgctccaatc  7012700                                                                                        --------->At4g35610                                                                                        <---------ZAT2                                                                  <---------ANAC46      --------->ZAT2                                                                  <---------REM1(1)     <---------At4g35610                                                                <------MYB83            ----------->RAV1(2)                                                                <---------ANAC46      <-----------RAV1(2)                                                                <------MYB46(1)  --------->GLK1(1)              ------->TEIL              -------------->OsCBT   <---------AtMYB61 <---------GLK1(1) xxxxxxxxxxxxxxxxxx>smallRNA(i2)        <---------ANAC46  <---------AHL20(2) <---------TOE2(3)    <--   tgtttcccatggtatgaatctctctctgttcaattgtttttcgcgttgaattcgggttatttgatttggtgtagaaattagggatttctcagctgaattg  7012800                                                                                                <----                                                                                                <----                                                                                             --------                                                                                            <--------                                                                      <------------CBF      <--------                                                                    <---------YAB1          <--------            <------MYB83                                        <------------CBF            <--------            <------MYB46(1)                                   --------->ARR11(3)            <--------      <---------TOE2(3)        <---------MYB46(3)         <---------At4g35610           <---------GLK1(1)  <----------DOF2     <---------WOX13(1)               <---------At4g35610         --------->YAB1 -------GLK1(2)      <------------CBF    <----------DOF2  --------->At4g35610    <xxxxxxxxxxxxxxxxxxx   gattctttaacatttggtttggagattgatgagttgttgttttcttttctatatttcttctgctgatattgtaattgtttctgtatgatgagttccgtgc  7012900                                                                                           --------->ANAC58                                                                                           --------->ANAC58     *TSS                                                                          --------->ARR11(3) -----ANAC58                                                                       <---------ARR11(3) -----ANAC58                                                              <---------ZAT2   --------->ANAC46 ->LBD16                                                                  --------->ZAT2 <---------AtLEC2 -ANAC55(2)                                                      <-----------RAV1(1) ------>ZmHOX2a(2) -ANAC46                                                       <----------DOF2    --------->YAB1 -ANAC58                                                     --------->ZAT2      <---------ATHB12 -ANAC58                        <---------ZAT6               <---------ZAT2      --------->ICU4 -ANAC55(1)               <---------ARR14(2)             ------>NtERF2    --------->At4g35610   <---- xxxxsmallRNA(fl3)       <------ZmHOX2a(1)        <------ZmHOX2a(1)       <---------At4g35610   -----   gagtgtgtttgaggcattcgaagaagaggatagagtgatagagaacaatgaaggactgcctccagctttgttgggaagctgcaatgatcttgcaaggcag  7013000             xxxxxxxxxxxxxxxx>smallRNA(i)           --------->LBD16                                                                      <----    <---------ANAC58                                   <---------ANAC58                         <----    <---------ANAC58                                   <---------ANAC58     <---------ANAC58  <------ --NtERF2 <-----------RAV1(2) <---------ANAC58      <----------DOF2         xxxxxxxxxxxxxxxx>smallRNA(i) ---->At4g35610               <---------ANAC58 <---------GLK1(1)            <---------ANAC58  -------   cctcatgcgtctccaggtttgatttctaaatggcatgtctagggtttggaaatgctttcttgatactaagaaatattagcttgttcgaaatgtgactcct  7013100       <------MYB83       <---------ANAC58       ----------->GT1       <---------ANAC46       <------MYB46(1)       <---------ANAC58      <---------MYB46(3)      <------MYB83      <------MYB46(1)      --------->MYB55(2)    <--------P   <---------ANAC58   <---------ANAC58   <-------GAMYB       <---------ANAC58               --------->GLK1(2)  <---------MYB46(3)   <---------ANAC46              --------->ARR11(3)                  <---------AHL20(2) ------DOF2            <---------ANAC58              <---------ARR11(3)               ----------->GT1 -----DAG2     <----------DOF2                     <---------TOE2(3)                  --------->TOE2(3) -----------AGL3   <---------ANAC58          ------->TEIL<---------ANAC46     --------->AHL20(2) ---- ---------->AGL3   <---------ANAC58          <---------YAB1        <---------ANAC46  ----------->GT1   tttttggttgggtgaaactttgcttgcttctatgtttaggcaatatgaacattgagattttgtgtagttgagtatatcattttaaaaatgttaaaatgca  7013200        --------->ANAC58        --------->ANAC58      <---------ALFIN1   ----------->HVH21   <---------ZAT18 <------NtERF2 <---------ZAT2                                                           --------->ATHB12 --------->At4g35610                                             <---------AHL20(2) --------->ZAT2    <---------YAB1                                <---------YAB1 <---------At4g35610      <----------DOF2           <----------DOF2   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----->ANAC46 --------->ANAC55(2)            <---------YAB1 <---------MYB52(1)                <------   ggcagctcacacgcttaagtgataaatgctttctctatttgtatgtgatcaatgctttctctgttttttaattgtttgattaggctattgtatgtgatca  7013300                                                  --------->ZAT18                         <---------ANAC58                                     --------->TOE2(3)                      <---------WOX13(1)                           <------MYB83        ---------->DOF2    <----------DOF2       <---------AHL20(2)                           <------MYB46(1)  <----------DOF2      <---------ANAC58       <-----------GT1                          --------->MYB59 <---------ATHB12 <---------ANAC58<---------ANAC58                          <---------TOE2(3) --------->TOE2(3)  <---------YAB1        ------->TEIL                      --------->ATHB12  --------->WOX13(1) <---------ANAC58<---------ANAC58 <----------DOF2     <---------YAB1 --------->REM1(1)     --------->ATHB12--------->ATHB12<---------ANAC58 ---YAB1     <---------AHL20(2)  --------->ETT(2) <---------ZAT18<---------ANAC58 <---------YAB1   atgctttctctgtttttaatagtttgattaggttgtctacatcaatctttaatgcacaattgattgtgcttgtagttgattgttatgaatttacttgaac  7013400  Previous    Next  AGI:  At2g16140.1    Description:  transposable element gene. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT3G47680.1); similar to hypothetical protein 24.t00018 [Brassica oleracea] (GB:ABD64940.1); contains InterPro domain Homeodomain-like; (InterPro:IPR009057) Range:  from: 7012905    to: 7015354    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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