Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                                                                                                -----                                             --------->YAB1                                     -----                                             <---------ICU4                                     <----                                             -------->HAHB4                                     <----                                            --------->ICU4                                      <----       <---------WOX13(1)                 --------->YAB1                  --------->YAB1       <-----  <---------At4g35610                  --------->YAB1              --------->At4g35610       --------  --------->At4g35610            <------ZmHOX2a(2)                 --------->ZAT2           <<<<<<<<<ARR1 >ZmHOX2a(1)                    <---------ARR11(3)                 <---------At4g35610      <-------- -->TOE2(3)                     --------->ARR11(3)                 <---------ZAT2           <<<<<<<<<ARR2   aatgagctaattgaaacattcttgtattcttcaagatcaaaacataataatgacttaagtactagtaccagctcaaacatgaaacatatgcacaatcata  6942000                                  <---------ARR14(2)                                  <-----------ARR10                                  <---------ARR11(1)                                  --------->ARR14(2)                                  --------->ARR11(3)                              <<<<<<<<<ARR1                              <<<<<<<<<ARR2    ---------->DOF2           <---------ATHB12  <---------MYB59           --------->WOX13(1)  --------->TOE2(3)         --------->YAB1                                    <---------ZAT2 ------>TEIL               --------->MYB46(3)                   <----------DOF2 ------->P                ------>MYB46(1)                      <---------ANAC58 ---->ARR14(2)            ------>MYB83                         <---------ANAC58 ---->ARR11(3)           ----------->RAV1(1)            ------->GAMYB         --------->ZAT2 -------ARR10           --------->AtMYB61              --------->ANAC46      ------>MYB46(1) -----ARR11(1)    ------->GAMYB--------->YAB1  --------->MYB46(3)   <---------AtLEC2 -----ARR14(2)    ----------->HVH21   ------->TEIL     --------->ANAC58      ------>MYB83 ----CCA1(2)     <---------MYB52(2)   -------->P       --------->ANAC58      --------->ANAC58  ------ ->YAB1         --------->At4g35610  <-----------GT1 --------->MYB52(1)      --------->ANAC58  ------ -ATHB12      --------->MYB46(3) <---------CCA1(2)  --------->TOE1(2)    ------->TEIL          ------   tctacctaaagcttgaacaactgacaccaacaatcatatctacctctcaacaatccaacgacatagcttttcatgaaccaagctccaattctatatcaca  6942100                                                                         --------->At4g35610                                                                         <---------At4g35610                                                                         --------->ATERF1(1)                                                                        --------->MYB52(1)                                                                       <---------WRKY38(1)                                                                     --------->ANAC58                                                        --------->ARR11(3)                      <----                                                        <---------ARR11(3)                      -----                                                        --------->ARR14(2)      <-----------RAV1(2)                                                        <---------ARR14(2) ------->GAMYB<---------bZIP60(2)         --------->HSFB2a(2)                           <---------HSFB2a(1)--------->MYB46(3)    <----         <---------HSFB2a(2)                    --------->At4g35610  --------->ANAC58   <---------ANAC46 --->ANAC58         --------->LBD16           --------->YAB1     --------->TOE1(3)   ----------->HVH21 --->ANAC58    --------->ARR14(2)            <---------ATHB12    --------->TOE2(3)   ----------->TGA1 --->ANAC46    <---------ARR14(2)          --------->WOX13(1) <-----------GT1 ----------->RAV1(1)   <   caatccagtttctacaaaatcccccaaaaaaaaaaaaaaaactttcaatcagatggaagatttgttaccttaggcaacggccacagggtgacgagtttta  6942200                                                                                                    -                                            --------->At4g35610                                   <--          <<<<<<<<<TBF1      --------->ARR14(2)           ---------->DOF2                        ----      <---------YAB1         <---------ARR14(2)    --------->At5g28300                           <---   <---------MYB52(1)        <-----------ARR10----------->TGA1                                  -----  <-------GAMYB              <---------ARR11(3)   ----------->GT1                               <---- --------->MYB52(2)          <---------ARR14(3)  <---------DEAR3(1)                            ------ -----TOE1(3)                --------->ARR11(3)  <---------ANAC46                             ------- ---->MYB59                  --------->ARR14(3)--------->MYB52(1)                     ------>ZmHOX2a(2) -----TOE2(3)                --------->GLK1(2)----------->HVH21                      <------ZmHOX2a(2) -------TEIL    <---------CCA1(2)           <---------At4g35610                     <---------ARR11(3)   ggttcgttattcttcttcgtatcgttttgaaaatcttccatattgtagatgacggtgatataaagagaacaacttgggcaattcgcgatctcttcgccga  6942300             <---------ANAC58      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->AGP1    --------->ARR14(3)    <---------ARR14(3)    <---------ARR14(2)                                        ------->TEIL    --------->ARR14(2)                                --------->ZAT18    <---------ARR11(3)                                <---------ZAT18    --------->ARR11(3)                           <---------ANAC55(1)   <---------GLK1(1)                             <---------ANAC55(2)   --------->GLK1(1)                             <---------ANAC58  ----------->ARR10                              --------->ANAC55(2)                    <---------CCA1(2) <------NtERF2                                   <---------ANAC58                     ------>ZmHOX2a(1) -------->LBD16     --------->HSFB2a(2)          <---------ANAC46                 --------->ARR14(2) -------LBD16----------------->AGL1             <-------TEIL <---------GLK1(2)    <---------ARR14(2) ----->ZAT2  <---------ANAC58                   <-----------------------TaNAC69(2)<---------ARR11(3) ------ZAT2  --------->ANAC55(2)               --------->CCA1(2)            --------->ANAC46 ---->ARR14(2)      <---------HSFB2a(2)       --------->ARR14(2)            --------->ANAC58 -----ARR14(2)     <---------LBD16            <---------ARR14(2)            --------->ANAC58 >NtERF2  <----------DOF2              <------ZmHOX2a(1)     <---------CCA1(2)   <---------CCA1(2) -->DEAR3(1) --------->YAB1           <----------ID1--------->REM1(2)     <---------ALFIN1 --------->TOE2(3)   gccggagatcttctttcgtaatctggaacaaatcaccacaaggacaaggatacgtgtacgcttgaatctcttcgttccactccatatcctctatctcaac  6942400      --------->ANAC58      --------->ANAC46      --------->ANAC58                                                           --------->LBD16     --------->SPL7                                                   --------->MYB52(2)   <---------SPL7                                           --------->ARR14(2)  <---------HSFB2a(2)  --------->TOE1(1)                                         <---------ARR14(2)  ----------->GT1     -  --------->TOE2(1)                                      <---------ANAC58       --------->HSFB2a(2)<- --------------->AtSPL3                                  <---------ANAC58      <---------LBD16     -- <---------------AtSPL3   <------------CBF       <------------CBF   --------->DOF5.7(2)           <-- --------------->AtSPL8 <---------YAB1          --------->ATHB12    <---------MYB52(1)         <-----   atcgtcgtacgacatcgcttacgcttccgattgagaagcgttgtatgtatagattggaagcgtttccagcgttagctatgttcgggaaaaaaaaacagga  6942500           <------MYB46(1)           <------MYB83          <---------TOE2(3)          --------->MYB59      <---------MYB46(3)                           <---------ICU4                                 <-- -------->MYB52(1)                              --------->YAB1                        --------->AHL20(2) --------ARR14(2)                          ------>ZmHOX2a(1)   <---------At5g28300   --------->AHL20(2) ------->ARR14(2)                          <---------HSFB2a(2) <-----------GT1   --------->AHL20(2) ----ZmHOX2a(1)                   --------->At4g35610 <-----------GT1      <----------DOF2        <-- -ZmHOX2a(1)                 >>>>>>>>>TBF1 --------->HSFB2a(2)<-----------GT1  ----------->GT1<xxxxxx   ggaaacggcgattaggtttttttagggggaagaagaagatgactcctcgatgaaaattacaaatttacccctattcgttttaagtaaataaaaaactaat  6942600                            --------->ZAT14                            <---------ZAT14                           ----------->HVH21                       --------->TGA1a                             <---------AHL20(2)                       <---------ZAT2                             --------->AHL20(1)                       <---------TGA1a                  --------->ANAC46                       <---------O2                    <---------ZAT14                     <---------          <-----------------AGL1                       --------->ZAT14             <---------YAB1   --------->LBD16     --------->O2                  --------->ANAC46        <---------AHL20(2) <---------LBD16       --------->ZAT2  <---------ARR14(2)         <---------AHL20(1)    <---------ICU4 --------->SPL7        ----------->RAV1(2)         --------->ZAT6 --------->AHL20(2)   --------->AHL20(2) -------ANAC58        ------>NtERF2    --------->ARR14(2)  ----------->RAV1(1)<---------AHL20(2)  --- -------ANAC58       <---------ALFIN1  --------->ARR11(3) --------->ANAC46   --------->AHL20(2) ----- xxxxxxxxxxxxsmallRNA(le3)<-----------HVH21------>ZmHOX2a(1)      <---------AHL20(2)   <---------AHL20(2)   tcgtgcggagttattcgaactggccacctgtgaagtcttaaaatcctctagtaccactacacaacaaataaaatttgtattaatttcgattaattacatt  6942700                                                                                                  ---                                                                                            <xxxxxxxx                                                                                            ---------                                                                                         -------->P--                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(2)                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                      --------->ANAC58        <---------TOE2(3)                                                  <---------YAB1<---------ARR14(2)    --------->TOE1(3)                                                    <-----------GT1 ------->TEIL    --------->TOE2(3)                               <---------YAB1    <---------ICU4  --------->ANAC55(1) <-----------GT1<---------GLK1(2)                <---------AHL20(2)  --------->AHL20(2)  --------->MYB52(1) --GT1 --------->MYB52(1)                        --------->AHL20(2)  <---------AHL20(2)  --------->ARR14(2) -------->TBP   --------->ARR11(3)          <---------YAB1           <---------YAB1  --------------->AtSPL3 ---->AHL20(2)----------->ARR10          <---------AHL20(2)     ------->TEIL         --------------->AtSPL8   atataaccctaacgtttagattttgaaattagttttcaactaatttatgattttatttttgatatgtatatataattacgattcaaacacgtacccgctt  6942800                                                             <------MYB46(1)                                                             <---------MYB46(3)                                                            <---------AtMYB61                                                           <--------P                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         --------->ANAC46              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <-- ------>TOE2(3)        <-----------GT1            --------->YAB1                                 <--- xxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxx>smallRNA(s) --------->ALFIN1               --------->ANAC55(2) >ANAC46            <---------DAG2        <---------At4g35610<------MYB83               <---------ANAC55(2) ---->ZmHOX2a(1)    <----------DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-----------RAV1(1) ------->TEIL   cctaaattttttcaaaaactcgcttttacgcttccaaacgcttccgcttctatcagagagtgttggtttatttatgtggtttagttgattatgtatttcg  6942900  Previous    Next  AGI:  At2g15910.1    Description:  CSL zinc finger domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G44150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47722.1); contains InterPro domain Zinc finger, DPH-type (InterPro:IPR007872) Range:  from: 6939488    to: 6942415    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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