Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100     <---------GLK1(2) ---->CCA1(2) ---->GLK1(1) -----GLK1(1) ----ARR14(2) --->ARR11(3) --->ARR14(2) ----ARR11(3)                                                                  ----------->GT1 -TOE2(3)                                                        <XXXXXXXXXXXXXXXXXXXXXMIR830*------- -TOE1(3)     ----------->GT1          <------ZmHOX2a(1)         ---------->DOF2          <------ZmHOX2a(1) -ANAC46    <---------LBD16          <---------TOE2(3)         --------->YAB1 <------ZmHOX2a(1)   atgcagaattttgactcggaaaaatgacattaagaggtttaggattcaaaaattcgcattgtttatcaaaagtatttggaggagaaaatataggattcca  6864400                                  --------->WRKY38(1)                                ------->MYC3                                <-------MYC3                               <---------O2                              <<<<<<<<<<ABI5                              <<<<<<<<<<BZIP12                       <-------MYC2                       ------->MYC2                       <-------MYC3                       ------->MYC3                                               --------->At5g28300                      --------->ANAC58                <-----------HVH21 <<<<<<<<<<<<<<<<<LFY              <-------TEIL----------->HVH21      <---------ZAT14       <------ZmHOX2a(1) ---------->AGL3      --------->ANAC58   --------->YAB1   <---------ANAC46       ----------->GT1   aatattggttttgggattcatggcacgtttgacacgttgagcatcatattgtacagcgtcaagtgtattagtaggaacaatggctgtaaatttgtttgta  6864500                                                            <---------At4g35610                                                    <--------ATHB1                                                    -------->HAHB4                                                   <---------ATHB51                                                   --------->ICU4                                                   <---------AHL20(2)                                        <---------YAB1      --------->At4g35610                                    <---------ANAC58--------->ATHB51             <---------GLK1(2) <------ZmHOX2a(1)   --------->AHL20(2)                             ---         ---------->DOF2      <---------YAB1       <---------YAB1                                 <--     <---------ANAC46        <---------TOE2(3)   --------->YAB1       <---------YAB1        <-------- <---------ANAC46   ----------->GT1 <---------ANAC58<---------ICU4 --------->ICU4      <---------YAB1   atggtttgtgtgaaagaaactcgagtaaaatgaggattgtttgtgatagaaaaataattgtcatcagaaattatgtttctcttcatcatatgattttcca  6864600                                             --------->YAB1                                            <---------YAB1                     --------->ARR11(3)                                          --------->YAB1           --------->ICU4                                          <---------ICU4       ========================HOX2a_HOX2a                                         --------->ICU4        <------ZmHOX2a(1)<------ZmHOX2a(2) ---->MYC3                          ------->MYC3        ---------->DOF2        <---------ARR11(3) -----MYC3         <---------ATHB12----------->GT1  --------->ANAC58          --------->At4g35610  -- ---GT1       ----------------->AGL3<-------MYC3    --------->ANAC58  <---------YAB1     <---------ANAC46   catgtgaattttggaatccaaatgaagatgaagaggcatgtgaattatgaaaacaagaaaaagaaggagatgatgaaaacagatcaccatggtttgtgtg  6864700                                                                            <---------YAB1                                                <---------AtLEC2          <---------ICU4                                          --------->ATHB12                --------->YAB1           ------->TEIL          --------->GLK1(2)                  <---------MYB46(3) --------->LBD16      ------->TEIL       <-------TEIL           <---------YAB1        <------ZmHOX2a(1) ---->ZmHOX2a(2)     <-----------GT1 <---------YAB1    <------ZmHOX2a(1) <---------YAB1     <--------   atccgaagtaatgaacctcgaatgaaccatttgagaattttgattcatttggatggaggaaaaaccacgattgttatcatcacagtgaggattgaactta  6864800                                                                                                <----                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                           <---------AHL20(2)                                                                                           <---------AHL20(1)                                                                                           --------->AHL20(1)                                                                                           --------->AHL20(2)                                                                                          --------->AHL20(2)                                                                                       <---------ICU4                                                <---------ANAC58                       <---------AHL20(2)                                            <------------CBF                          --------->ICU4                                        <-----------GT1                               --------->AHL20(2)                                    <---------AHL20(2)                           --------->ANAC55(2)                                   --------->ARR11(3)        <-----------TBP     <---------ANAC55(2)          <---------ARR11(3)       <---------ARR11(3)       <----------DOF2      --------->ANAC58          --------->ARR11(3)       <---------AHL20(1)  <-----------GT1           --------->ANAC46  -- ---------AGL1  <---------YAB1----------->GT1   <---------ANAC58                 --------->ANAC58  --   tttggcatagaagacattttgaaagatagatagagtatatattttctattgtttgtcttacccttttatatcaaatacaaactacgtaataaatatatta  6864900                                                                               <-----------TBP                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                      <---------YAB1                                                                     --------->AHL20(1)                     <---------AHL20(2)                              <---------AHL20(1)             -                     ----------->TBP                                 <---------AHL20(2)            <-                     --------->AHL20(2)                              --------->AHL20(2)       -------              <---------AHL20(2)                                    --------->AHL20(2)        <------        ----------->GT1                 --------->GLK1(2)           --------->YAB1       ---------->DOF2       --------->ANAC58                 <---------ARR11(3)          <---------AHL20(2)  --------->AHL20(2)       --------->ANAC58                 --------->ARR11(3)      --------->AHL20(2) <---------YAB1----     --------->MYB52(1)      ---------->DOF2  <----------DOF2   <---------AHL20(2) ----------->TBP -- -------GT1   --------->AHL20(2)<----------ID1<---------DAG2   --------->AHL20(2)--------->YAB1  <--- ------->TOE1(3)   <----------DOF2     --------->RVE1(1)    --------->YAB1<---------AHL20(2)  ------- ------->TOE2(3)  <---------ICU4----------->GT1            <---------YAB1--------->AHL20(2)  <-------   acctcaaaaacggaaattaatctttaaatgcgaaaggaaaaaaatctactttatgttctctattataaaattatattaaatatttataaataaaagaatc  6865000                                               --------->CCA1(2)           --------->AHL20(2)      --------->AHL20(2)   <---------ICU4                 <---------AHL20(2)   -------->HAHB4                --------------->AGL15                                ---------------   <---------AHL20(2)            <---------------AGL15                                <--------------  --------->ICU4                <-----------------AG                                 --------->TOE2(3)  <---------ATHB51              =====================================================================  <---------YAB1                <-----------------AGL1                               <---------ANAC58 -------->YAB1             <---------YAB1     <---------AHL20(2)            <-----------HVH21 --------AHL20(2)        --------->YAB1 <------MYB83                       ------>ZmHOX2a(1) -->ARR11(3)            <---------ATHB12<------MYB46(1)                  <---------ANAC58 ---ARR11(3)          --------->WOX13(1)----------->GT1       <---------AHL20(2)     <---------ANAC58 ----->TOE2(3)      ------------>CBF   --------->MYB59       --------->AHL20(2) <----------TaMYB80 ------->AHL20(2)  --------->AtLEC2<---------AHL20(2)      --------->AHL20(2) --------->YAB1 -------DOF2  <-----------GT1   <-----------------AGL3------------>CBF   <---------ANAC58 -->GLK1(2)<---------AHL20(2)<----------DOF2  <---------AHL20(1)      --------->GLK1(1) --GLK1(2)--------->AHL20(2)<---------ICU4    --------->ARR11(3)      <---------GLK1(1)          <---   tttaattattcatttatttccctgcaatcatctttatttatttggtaatatatggatgcaatataaaatttgatttcctgtcatattccttgattcagta  6865100                            --------->AHL20(1)                            <---------AHL20(1)                                ---------->DOF2                        <---------AHL20(2)                                 --------->YAB1                <------ZmHOX2a(2)                                     --------->AHL20(1)                --------->CCA1(2)                                     --------->ARR11(3)               --------->AGP1                                         <---------ARR11(3)    <---------ARR14(2) --------->AHL20(2)                           <---------AHL20(1) >AGL15        <---------ARR11(3)                         <----------DOF2 <-------TEIL -AGL15        --------->ARR14(2)              <---------TOE1(3)    --------->AHL20(1)             <- =MADS_MADS    --------->ARR11(3)              <---------TOE2(3)   --------->AHL20(2)        <------- ---------CBF  <---------ARR14(2)              --------->DAG2  <------ZmHOX2a(1)        <---------MYB46(3)   attgaaaatatggacaagatccagatttaatatatatgttaacatatataaggtagtttactttaggaaatatatattcataaagagcatttgttgatgt  6865200                                                                                     --------->AHL20(2)                                                                                  <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                                 --------->AHL20(2)                                                                                <---------YAB1                                                                             --------->ICU4                                                                             <---------YAB1                                                                           -------->ATHB1                                                                           <---------ICU4                                                                           --------->YAB1                                                                           <---------AHL20(2)                                                                           -------->HAHB4                      <------MYB46(1)      ----------------->AGL3         --------->ICU4                      ----------->GT1      ------>ZmHOX2a(2)              <---------ATHB12                      <------MYB83         ==========================================================                     --------->MYB46(2)   <------ZmHOX2a(2)               <---------ATHB51         --------->TOE2(3)               --------->ARR14(2)               <---------YAB1         --------->YAB1         --------->ANAC55(2)                     <---------ICU4   --------->AHL20(2)      <---------CCA1(2)       <-----------GT1           <---------HSFB2a(2)--------->ATHB51 --------ANAC46      <---------MYB46(3)  <---------ARR14(2)         <-----------GT1  <---------AHL20(2) --TOE2(3)       <---------YAB1 <---------ANAC55(2)     --------->HSFB2a(2)<--------HAHB4<---------AHL20(2)   tgtgtcttctatcttaattttgtttggtgatattacttatttggatccctatttagttctataagtttatttactaattattattaaataaatatttata  6865300  Previous    Next  AGI:  At2g15740.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT2G18490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71222.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 6863828    to: 6864817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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