Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ARR14(2)                                                                     <---------ALFIN1                                                                   <-----------GT1                                                          <---------MYB52(1)  <---------GLK1(1)                                                         <-------GAMYB        --------->GLK1(1)                                                         <---------At4g35610--------->LBD16    ----------->GT1                      <------------------------ANAC81--------->DEAR3(1) --------->ANAC46 --------GT1  <---------YAB1  <-----------GT1   ---------->ID1  ----------->GT1--------->ARR14(2)   ttcagtttgtaaaaatatgattatctaacaattttcagttttttgtttttgtttttttcagttgttttgtaacacctccgaaatccgaactatacaaaac  6856200                                           --------->ANAC55(2)                                           --------->ANAC58                                           --------->ANAC55(1)                 --------->ANAC58                                           <---------ANAC55(2)                 --------->ANAC58                            <-----------GT1--------->ANAC58         <------MYB46(1)                    <---------MYB46(3)     --------->ANAC46         ----------->GT1        --------->ZAT14                  <-------GAMYB       <---------ICU4                <------MYB83 ---------->DOF2                 <------MYB46(1)   <-----------------AGL1          <---------TOE2(2)       <---------ZAT14                 <------MYB83<---------TOE2(3)                   --------->TOE2(2)  --------->At4g35610           <---------ATHB12 --------->MYB52(1)                   --------->TOE1(2)  <---------At4g35610   taagagtatgccaattgttcggttgtcgaataacgtttcacaattacgcaacttgagaaaaactaaacgtaggtgaaaaacaagaaagctaactacagta  6856300                                      --------->GLK1(2)                                         -----                                    --------->HSFC1(2)                                          -----              --------->TOE2(3)     --------->HSFB2a(1)                                         -----  >>>>>>>>>GATA-4                --------->LBD16                                               <-----  >>>>>>>>>GATA-2            --------->GLK1(2)                                                <------  <---------ARR14(2)         --------->ARR14(2)                               --------->AHL20(2)-----  >>>>>>>>>GATA-3            <---------ARR14(2)                               <---------AHL20(2)-----  >>>>>>>>>GATA-1           --------->RVE1(1)                            --------->TOE1(3) ----------  --------->ARR14(2)      --------->AHL20(2)      ---------->DOF2        --------->TOE2(3)<----------   tgtggattcagtcaaaacttaaacccaaaaaaatccgaagaatccaaaaactaaaagagcaaaacataagtcaaacctaaaaaaatggaatgggtcacac  6856400                                                                       --------->AHL20(1)                                                                      --------->AHL20(2)   <-----------GT1                                                 --------->AHL20(2) ---->ANAC58                                                      <---------AHL20(2) ---->ANAC58                                                      --------->AHL20(2)   --------->YAB1 ---->ANAC46                                                  --------->AHL20(2)     --------->AHL20(2) ----TOE1(2)                                                  <---------AHL20(2)    --------->YAB1 ---ALFIN1                                               --------->AHL20(2)        --------->AHL20(2) ---->ANAC55(2)                                      --------->AHL20(1)<---------AHL20(1)           - ---->ANAC55(1)      <---------YAB1                  --------->AHL20(2)--------->AHL20(2)       ----- ->HVH21        ----------->RAV1(2)                 --------->AHL20(2)<---------AHL20(2)    --------- -HVH21    <-----------GT1        --------->HSFB2a(2)<---------AHL20(2)<---------AHL20(2)--------->AHL20(2)   gttattaactaatatactacctgatgcttaatgcttctgaaatgaacacataaaaaaaattgaataaaataaataaattagataaataaaaataaaaaga  6856500               <-----------TGA1                     <----------DOF2               <-----------HVH21              --------->HSFB2a(2)              --------->bZIP60(2)             ------>ZmHOX2a(1)              --------->ANAC58                <---------HSFB2a(2)                                   -              --------->ANAC46            <-----------HVH21                                 <--------      --------->YAB1                 --------->At4g35610                            --------->AHL20(2)     --------->ICU4                  <---------GLK1(1)                  --------->DAG2  <---------AHL20(2) -------->ETT(1)      <---------MYB52(1) --------->DEAR3(1)            ---------->DOF2 <---------AHL20(2) ---->ARR11(3)--------->ANAC58       --------->GLK1(1)      ------------>CBF        <---------AHL20(2) ->DOF2      <-----------STF1       <---------ARR11(3)     <----------DOF2    --------->TOE2(3)   ---   tgtcggaatcatcaaaacgtcaccgtttcatagctcaagagctccgtcctcgaactttgcgcttcaattcccaaaaagtttcttaattttttattttttc  6856600                                                             ----------->RAV1(1)                                                          --------->ANAC46                                                 <---------MYB52(1)                                                --------->LBD16                                               ----------->GT1                           <---------AHL20(2)                                               <---------ANAC55(2)                       --------->ATHB51                                               <---------ANAC46                          <---------ICU4                                               --------->ANAC55(2)                       -------->ATHB1                                              <-------TEIL--------->ANAC58               --------->ATHB12                                              ------>ZmHOX2a(2)                          -------->HAHB4                                             <------ZmHOX2a(2)                          <---------YAB1                                             --------->CCA1(2)                          <---------ATHB51                                            --------->ARR14(2)                          <---------ATHB12                                        ---------->DOF2   --------->ANAC58--------->HSFB2a(2) ----->ZmHOX2a(1)                    *TSS   <---------ARR11(3)            <---------HSFB2a(2) -AHL20(2)                  --------->ANAC58--------->ARR11(3)  --------->TOE2(3)       --------->ICU4 -------->RAV1(2)           --------->ANAC58<---------ARR14(2) --------->REM1(1)     ------------>ATHB5   tcctgtgtaagtgcaaacatctaaattcccaagaaccaaaactaaagatccgtaaattcgaagcaacatcaacgttctcgagcctctctaattattgttt  6856700                                 <------ZmHOX2a(1)                                              <----                               --------->LBD16                          <----------DOF2        <-----                              <---------LBD16                     --------->ANAC58             ------                              --------->HSFB2a(2)                 --------->ANAC46           <-------                       <----------DOF2  --------->AHL20(2)        --------->ANAC58        --------->At4g35610                     ---------->ID1     <---------AHL20(2)      ---------->DOF2           <---------At4g35610                    <-----------GT1 --------->ICU4         ----------->GT1  <XXXXXXXXXXXXXXXXXXXXXMIR2936              ---------->ID1  <---------HSFB2a(2) <XXXXXXXXXXXXXXXXXXXXXMIR472     <----------DOF2   tatagaccaaaaattcttcgtttttcttttttccaggaatttttaatttgtatgggctgatcagaaaaaagccactttgtgttttcttttttagctggac  6856800                                                                                       <---------ALFIN1                                                                                       --------->ZAT6                                                                                  <------NtERF2                                                                                 ------>NtERF2                                                                                 <---------ATERF1(1)                                                                                <---------DEAR3(1) -----DEAR3(1)                                                         --------->RAP2.6(2) ----ORA47(1)      <----------DOF2                                   --------->At4g35610 --->SPL7--------->WOX13(1)                                          --------->ZAT2<---------MYB52(2) --SPL7<---------ATHB12          <---------DAG2                      <---------At4g35610   ggtgtctgaatcattcaatgcctttctcttctctacctttctaaatctctctctctctatctctccatcgaagcagccatgggcgacgaacactctctca  6856900                                          <---------DAG2                                      <-----------GT1                 <---------ANAC58                    <---------LBD16   ---------->ID1                  <---------ANAC58           ----          <----------DOF2         ------>ZmHOX2a(1)                   <---------ANAC46           ----          <---------DAG2       ---------->ID1  <-----------GT1  <---------TOE1(3)              ------         <---------DAG2    <----------DOF2<----------DOF2       <---------TOE2(3)         ----------- ---------->DOF2 <---------GLK1(1)<----------DOF2         <---------YAB1             --------->YAB1   tcccaaaggtacctttttgatttctgggtctttatcctttttcccttttttacgcttaatctgattagggtttcttgttttcagtaatcaaattgtacaa  6857000                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                    ----------->GT1         <-----------GT1                                            --------->ANAC55(2)    <---------ARR11(3)         ----------->GT1         ------->TEIL <---------ANAC55(2)  <---------YAB1            --------->GLK1(2)          <---------ARR14(2)                         ---  --------->ICU4           <---------GLK1(2)           --------->GLK1(2)                          --- ----->ANAC58        --------->WRKY38(1)               --------->ARR14(2)                    <------- ----->ANAC58      <-------GAMYB                <----------DOF2 <---------ANAC58           ---------- ---->DOF2 ----------------->AGL1     --------->AHL20(2)        <---------ANAC58           <--------- >GT1 <---------ICU4 --------->WRKY12 <---------AHL20(2)      --------->ARR11(3)           ==========   agccatgatttttaccattttcgttgaacgattctgttaaaaaattgaaactttctgaatctgagttcttgcgtaaattttgaattttggtttctctttc  6857100  Previous    Next  AGI:  At2g15730.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47777.1); contains domain SSF52540 (SSF52540) Range:  from: 6856637    to: 6859225    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version