Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->ANAC46                                                    ---------                        --------->ANAC58       <---------AHL20(2)                          <---------HSFB2a(2)                        --------->ANAC58   --------->ATHB51                                --------->HSFB2a(2)                       --------->RAP2.6(3) --------->AHL20(2)                              <---------HSFC1(1)                       <---------LBD16    <---------YAB1    <-----------GT1                --------->HSFC1(1)                      --------->MYB52(1)  --------->ICU4    ---------->ID1                <---------LBD16               <----------DOF2     ---------->DOF2         <-----------GT1     <---------ZAT14            <---------YAB1--------->At5g28300  --------->AHL20(2)              --------->ZAT14   cacatacaaagtttatgctttaaatcacggcaaatggcaaagtcattatttaaatgacatttttcccatttttgtttttagtaaactaattttccagaaa  6821200                                             ---------->DOF2                                        ------>NtERF2                                 <---------AHL20(2)                    ----------->GT1    <----------ID1                 <---------MYB52(1)    --------->ANAC46      ------>MYB83        --------->AHL20(2)      <---------AHL20(2)           ------>MYB46(1)     ---------->DOF2        <---------AHL20(2)      <---------AHL20(1)         <---------MYB59---------->DOF2       <---------AHL20(2)       --------->AHL20(2)       ------->TEIL  --------->TOE2(3) --------->ARR14(2) >LBD16--------->AHL20(2)    --------->WOX13(1)      <---------KAN4(2) --------->TOE1(3) <---------ARR14(2)   aacactgaatttaatttcggttttgtaaattcaattaatttgcgccaaaaatcggaatgaaccaaactaataacattaaaccgaaatgccgaatcccaat  6821300                                                       <---------MYB52(1)              ------------>CBF                                                      --------->At5g28300          --------->MYB46(3)               --------->YAB1                        --------->TOE1(3)            --------->ZAT2      --------->ZAT14                                --------->TOE2(3)           <---------ARR14(2)      <---------ZAT14                             <-----------GT1                --------->MYB52(1)    --------->At5g28300                         <---------AHL20(2)               ------>MYB46(1)   --------->TOE1(3)                      ------------>CBF  --------->AHL20(2)   ------>MYB83   ------->GAMYB                ---------->DOF2--------->AHL20(2)--------->YAB1  --------->ARR14(2)   --------->TOE2(3)  --------->YAB1 ------------>CBF----------->GT1           <---------MYB59   ttcaaccgtaaactgtatcatcactcataaaccgaaatgcccaatccaatttaaaccgtaaattatatcatcactcaaaaaccgaactgcccaatgccaa  6821400                                 <---------MYB52(1)                   --------->ARR14(2)                                                <---------MYB52(1)                   <---------ARR14(2)        --------->YAB1                         --------->At5g28300         <------------CBF       --------->At5g28300                                --------->TOE2(3)      <---------MYB52(1)       --------->TOE2(3)                                   --------->TOE1(3)     --------->At5g28300       --------->TOE1(3)                                   ----------->GT1    --------->TOE2(3)          ----------->GT1      --------->YAB1              <-----------GT1    ----------->GT1<---------GLK1(2)  <---------AHL20(2)              <-----------ARR10 <------------CBF    --------->TOE1(3)   --------->YAB1--------->AHL20(2)      ---------->DOF2 <---------AHL20(2)   --   cttaaaccgtaaattgtatcagatactcataaaccgtaaattatatatcatcactcataaaccgaaatgccaaatctaatttaaaccgtaaattgtatca  6821500                                   <---------MYB52(1)                                  --------->At5g28300                                 --------->TOE1(3)                                 ----------->GT1                                 --------->TOE2(3)                              <-----------GT1                            <---------AHL20(2)                                               ------>ZmHOX2a(1)                      ------------>CBF                           <---------ANAC46          ----------                    <---------ARR14(2)                          --------->LBD16         <----------DOF2            ---------->DOF2--------->AHL20(2)              ---------->DOF2             <---------ICU4 ------->GLK1(1)    --------->ARR14(2)<------------CBF  --------->YAB1        ------------>CBF   gatttcataaaccgaaatgccaaatccaatttaaaccgtaaattgtagtatcagacactcataaaccgcgtaaacctctcttcaattcatctttcctgag  6821600                                                            <------NtERF2                                                           --------->LBD16                                                           ------>NtERF2                                                          --------->ATERF1(2)                                                          --------->DEAR3(1)                                                          --------->RAP2.3(3)                                                          --------->RAP2.3(2)                                                          <---------DEAR3(1)                                                          <---------ANAC46                                                          <---------ATERF1(2)                                                         --------->ERF1                                                         <---------LBD16                                                         --------->ORA47(2)                                                         --------->RAP2.3(1)                                                         --------->ATERF1(1)                                                         <------NtERF2                                                        --------->ABI4(2)                                                        <---------DEAR4(2)                                      <---------ARR11(1)<---------ERF1       ------>NtERF2                                      --------->ARR14(2)<---------RRTF1(1)  --------->DEAR3(1)                                      <---------ARR14(2)<---------RAP2.3(1)--------->ATERF1(1)                                      --------->GLK1(2) ------>NtERF2     <---------ATERF1(1)                                      <-----------ARR10 <---------ATERF1(1)<------NtERF2                                      ------->TEIL      <---------RAP2.6(1)--------->RAP2.3(1)                                     <---------ARR14(1)<---------DEAR3(1) <---------At4g35610                                  --------->ANAC58     --------->DEAR3(1) ------>NtERF2                                  --------->ANAC58    --------->RAP2.3(1) <---------RAP2.3(1)                                 ------>NtERF2        --------->ATERF1(1)--------->RAP2.3(2)                                <---------ALFIN1      --------->RAP2.6(1)--------->ATERF1(2)                                --------->DEAR3(1)   <---------ATERF1(1) <---------ATERF1(2)                             --------->ANAC46        <---------RAP2.3(1) --------->RAP2.6(2)                             --------->ANAC58        --------->LBD16     --------->DEAR3(1)                             --------->bZIP60(1)     ------>NtERF2    <-----------RAV1(1)                             --------->ANAC58       <---------RAP2.3(2) --------->DEAR3(2)                       ------->TEIL  <---------CCA1(2)--------->ERF1  ------>ZmHOX2a(1)                       <---------ARR11(3)           --------->ANAC46----------->RAV1(2)                      <---------CCA1(2) --------->TOE2(3)--------->DEAR4(2)--------->DEAR4(2)                  <---------ANAC46<------NtERF2    <---------LBD16  <---------At4g35610  ------>ZmHOX2a(1)                  ----------->RAV1(2)<---------GLK1(2)--------->RRTF1(1)--------->RAP2.3(1)<--------- ->RAV1(2)<-----------GT1   --------->SPL7      <----------DOF2   <-----------GT1   <----------DOF2   ccatgagacgtttcacagtcccctgtatcttacgccaccgaatctcaattctttccggcgccggctattctcctgccgccgctcgtctttcctctttagc  6821700                                                                               <---------ARR14(2)                                                                            <---------ANAC58                                                                            <---------ANAC58                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               --------->ARR11(3)                                                               <---------ARR11(3)                        <---------At5g28300                    --------->ARR14(2)             --------->LBD16                                   <---------ARR14(3)          ------->MYC3            --------->LBD16------>NtERF2                       --------->ARR14(3)          <-------MYC3         ------->GAMYB <-----------GT1                         <-----------ARR10          <---------O2   --------->TOE2(3)<---------ICU4                             <---------ARR14(2)         --------->ANAC46  --------->YAB1   --------->ICU4      --------->HSFB2a(2)     --------->AGP1  --------->ARR14(2) -DOF2 --------->At4g35610--------->DEAR3(1)                 ----------->ARR10<---------CCA1(2)   acaaacatcaactcccgagtcagtattaccgccgataacttctgaaattttgctcgagtcgataagatcttctcagtggcatatcgtcgaacacgttgca  6821800                    ------->TEIL                                                        <----------DOF2                   <---------CCA1(2)                                                    <---------DAG2               <---------ANAC58          --------->bZIP60(2)                  <---------ALFIN1               <---------ANAC58          --------->O2                         --------->AtMYB61               <---------ANAC46  --------->ANAC46         <-----------GT1     ------->GAMYB          --------->AtMYB61     <---------REM1(2)    ------>ZmHOX2a(1)       --------->MYB46(3)<-----       <---------ALFIN1  --------->REM1(1)<-----------HVH21                --------->WOX13(1)  ------   gacaaactcacaccttcgcttgtatctacaactctactcagcctcgtcaagactcctaatttagccttcaatttcgtcaaccacatcgacctttatcgcc  6821900                                         <---------ARR11(3)                                        --------->ZAT2              <---------MYB52(1)     --------->HSFB2a(2)  <----------DOF2                <---------At4g35610        <---------MYB52(1)      <---------MYB52(1) ----ANAC46                      --------->At4g35610       <-----------HVH21      ----------->GT1 ----->RAV1(2)               <-----------HVH21            --------->ANAC46---------->DOF2  <---------HSFB2a(2)   tggactttcaaacacagtgtctagccatcgctgtcatctccaagctctcttctccaaaacccgttactcagttactgaaagaagtcgttacttctcgtaa  6822000                                                                    <----------DOF2                                                                 --------->GLK1(2)                                                                <---------GLK1(2)                                                              --------->ANAC58                                                          --------->ANAC58                                                          --------->ANAC58              <-----------RAV1(1)                                           ------>ZmHOX2a(2)  --------->ANAC58         --------->ARR11(3)                                       <---------YAB1    --------->DAG2               --------->At4g35610              <----------DOF2          <---------ATHB12 ---------->DOF2               <---------At4g35610             <---------DAG2    <---------ANAC58      --------->ANAC58             <-----------HVH21      --------->YAB1           <---------ANAC58      --------->ANAC58       ------>ZmHOX2a(2)   gaactcaataagaaaccttttcgatgaattagtgcttgcccatgatcgattagagacgaaaagcacgattcttttcgatctcttagtcagatgttgttgt  6822100  Previous    Next  AGI:  At2g15630.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G01110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43459.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 6821603    to: 6823486    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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