Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <-------TEIL                                                                                     ----------->ARR10                                                                              --------->LBD16                                                                          ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                     <---------RAP2.6(2) --------->GLK1(1)                                                    --------->SPL1(2)    <---------GLK1(1)    -------                                                    --------->SPL7      --------->ARR14(2)  <--------                                                    --------->RAP2.6(3) <---------ARR11(3)<---------ANAC58                                                  <---------SPL7        <---------ARR14(2)<---------ANAC46                                                <---------------AtSPL8  --------->ARR11(3)<---------ANAC58 --->LBD16                                 ------->GAMYB             <---------WOX13(1) --------->GLK1(2) ---LBD16                     <------ZmHOX2a(1) <---------------AtSPL3  <---------AGP1 <---------GLK1(2)   ggttactctgttcgaatttagaaacagagtaaggactctcatcaacgaaaacagtacggccttggaagttgatagatctccagagaagagattcgtgagt  6751500                                                                                                -----                                                                                        <------MYB46(1)                                                                                        <------MYB83<                                                                                        <---------ANAC46                                                                                       <---------MYB46(3)                                                                   --------->ANAC58    <---------AtMYB61                                                       <---------------------WRI1      --------->MYB111(2)                      ----------->RAV1(2)            <---------AtMYB61                 --------->MYB111(1)     <---------ATHB12 --------->ZAT2                 --------->ALFIN1---------->DOF2   --------->MYB55(2) -->MYB52(2)          <---------ZAT2        <-----------RAV1(1)    --------->ANAC58    --------->MYB46(2) -MYB52(1)    ----------->GT1             --------->YAB1<---------ANAC46 <------ZmHOX2a(1) <---------MYB46(3)   tagtccaaagattaagaggttacaagctgggccatgagagtgaatgatgttggagatggtggagagttcaagaaaggacatagatgtgtttggtggtgat  6751600                                                                                             >>>>>>>>                                --------->ALFIN1                                             >>>>>>>>                                <---------AtMYB61                                            >>>>>>>>                             --------->ALFIN1                                                >>>>>>>>                      --------->DEAR3(1)                                                <---------ANAC46                   <---------DEAR3(1)                                                   <---------ANAC58                   <---------RAP2.6(2)                   --------->At4g35610            <---------ANAC58       <---------ANAC46   <------ZmHOX2a(1)              <---------At4g35610         <---------ANAC46     <---------ZAT14  <---------ANAC46              --------->ALFIN1                 --------->ALFIN1     --------->ZAT18 ------>NtERF2               --------->ALFIN1                  <---------ANAC46     --------->ZAT14 <------NtERF2              <------ZmHOX2a(1)                 <---------AtMYB61    --------->ALFIN1<---------RAP2.3(1)       --------->ALFIN1                 <---------ARR14(2) ---->ICU4        --------->ZAT18            <------ZmHOX2a(1) <------ZmHOX2a(1)  --------->ALFIN1 <- ------ZmHOX2a(1)--------->ALFIN1<---------MYB46(3)<------ZmHOX2a(1)          <------ZmHOX2a(1)  <---   gaggaagtgtagtggagaagtgcggcgaggactggtggtggaagagaggaggaggagggagatgaggagagagagtgagaggatgtggtggagtggattg  6751700                                                                                         <------NtERF2                                                                                        <---------SPL7                                                                                       <---------ANAC46                                                                                      <---------LBD16                                                                                      --------->ATERF1(1)                                                                                      <------NtERF2                                                                                     ------>NtERF2                                                                                     <---------ATERF1(1)                                                                                     <---------RAP2.3(1)                                                                                    --------->O2                                                                                    <---------RAP2.3(2)                                                                                    <---------O2                                                                                   --------->ATERF1(1)                                                                                  ------>NtERF2                                                                                 <---------DEAR3(1)                                                                                 --------->DEAR3(1)                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                                --------->RAP2.3(1)                                                                               <---------RAP2.3(1)                                                                               <---------ERF1                                                                               ------>NtERF2---------                                                                               <---------DEAR4(2)                                                                               <---------ATERF1(1)                                                                               <---------RRTF1(1)                                                                               <---------RAP2.6(1)                                                                               <---------ORA47(2)                                                                              <---------ANAC46                                                                              <---------DEAR3(1)                                                                              --------->ATERF1(2)                                                                              <---------ATERF1(2)                                                                              --------->DEAR3(1)                                                                              <---------RAP2.3(3)                                                                             --------->RAP2.3(1)                                                                             --------->ATERF1(1)                                                                             <---------ABI4(1)                                                                             ------>NtERF2 <---------MYB46(3)                                                                             <------NtERF2<---------ANAC46                                                                            <---------ATERF1(1)                                                                            <---------RAP2.3(1)                                                                           <---------DEAR3(1)                                                                           <---------RAP2.6(2)                                                                           <---------RAP2.3(2)  <------ZmHOX2a(1)                                                  <---------MYB46(3)<---------DEAR3(1) >GATA-2                                                          <---------MYB46(3)<---------DEAR3(1) >GATA-3                                                         <---------DEAR3(1)<------NtERF2 >GATA-4                                                         --------->ALFIN1----------->HVH21 >GATA-1                           ---------->DOF2               <---------AtMYB61<---------ATERF1(1) -----ZmHOX2a(1)         <------ZmHOX2a(1) <------ZmHOX2a(1)--------->MYB52(1)<---------RAP2.3(2) ------TOE2(3)---------->DOF2  <---------ZAT14          --------->YAB1    <---------LBD16--------->ATERF1(1)   aggaggagaagagagagaaagagaagaggagagtgaagaaagagaggaagaagatgaataagaaacggtggtgattcgcggcggcgacggcggagggtga  6751800                    <---------MYB46(3)                   <---------AtMYB61                   --------->ALFIN1                                                               ---                   <---------DEAR3(1)                                                           <----                 <---------MYB46(3)                                       ----------->RAV1(1) <------                <---------AtMYB61        <---------ZAT6      <---------AHL20(1)               -------                --------->ALFIN1    <---------GLK1(2)        --------->AHL20(2)              --------          <---------ZAT14        --------->YAB1<-----------RAV1(1)       <---------ETT(1)    <------- -->GT1--------->MYB52(2)      --------->GLK1(2)             <---------AHL20(2)         ----------->GT1   ttttgaagttagtggagagtggtggtggaagagaatcagattagtgtttgtgttgctcttcattttattttttgtccgacaaaacaaaaatagaaataat  6751900   --------->ANAC58   --------->ANAC58 ------->DOF2 -----YAB1 ---ICU4 -->YAB1                       ----------->GT1                     <-----------TBP ->ICU4                <----------DOF2<---------YAB1         ----------->GT1      <---------AtMYB61 --ATHB51   *TSS   ---------->ID1    <-----------TBP   ---------->DOF2         ----------->HVH21   gaaagacgaaatgtgtgttttgtctctttaagaaggtttttttatagacaaaaaaaaaaaagaaggtttttttataaaccggtgatggtttagagaaata  6752000                                                            <------MYB46(1)                                                            <------MYB83                                                           --------->MYB55(2)                                                           <---------MYB46(3)                                                          <--------P                                                          <---------MYB55(1)                                                     --------->MYB52(1)                         <----       <----------DOF2               <---------HSFB2a(2)  --------->ALFIN1                      -----      <---------ANAC46            --------->ARR14(2)--------->ARR14(2)                          <----      <---------ANAC58            <---------ARR14(2)<---------ARR14(2)                          -----      <---------ANAC58          --------->LBD16    --------->MYB46(3)                       <-------- ----------------------->TaNAC69(2)  --------->HSFB2a(2) <---------MYB52(1)              <---------ICU4 <-----------RAV1(1)          <---------LBD16     --------->ANAC58                      --------->ICU4 --------->ALFIN1          --------->KAN4(2)      --------->ANAC58                ----------->GT1   gatgtgttgcttttgtacatttttgggtttattccggttctggagcaagagcaagaaccggtgggtttgaaaactttgaaacggatgttaattatgtcag  6752100                                                                                                  <--                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                              --------->ZAT6 <-------                                                                         <---------ICU4   --------->YAB1                                                                         --------->YAB1 <---------YAB1       ------------>AtMYB77                                      <-----------ARR10      <---------AHL20(2)       --------->MYB52(1)                                        --------->ARR11(3)     --------->AHL20(2) -----ZAT2  <---------MYB52(1)                                   <---------ARR14(2)    --------->TOE2(3) ---->ZAT2  <--------P                                           <---------ARR11(3)    --------->YAB1 -----At4g35610                                  <---------TOE2(3) --------->TOE2(3) --------->AHL20(1) ---->At4g35610 <---------ZAT6         <---------ICU4           --------->RVE1(1)   --------->YAB1--- ---HVH21  --------->At5g28300         --------->YAB1  <-------TEIL--------->YAB1   --------->AHL20(2)   cttacatagtaacggttagtgttagagcatctctatctccatcatcagtttaagaaattcatgtgaatatcttaataataacacaataatattaataaaa  6752200                                                          <---------ARR11(3)                                                          --------->AHL20(1)                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                           --------->TOE2(3)                                           --------->YAB1 <---------AHL20(1)                                         --------->ARR11(3)    --------->ANAC46                   <---------AHL20(2) --------->ARR11(3)  <-----------GT1              <----------DOF2   <---------AHL20(2)   --------->TOE2(3) -------AHL20(2)               --------->TOE2(3) --------->AHL20(2)<---------ARR14(2) -->AHL20(2)                   --------->TOE1(3) <---------AHL20(1)<---------GLK1(2) ---AHL20(2)          ----------->GT1 --------->AHL20(2)  <---------AHL20(2)                      --- --AHL20(2)     --------->AHL20(2)    <---------AHL20(2)  --------->AHL20(2)                     <--- ->AHL20(2)    --------->AHL20(2)--------->AHL20(2)  <---------AHL20(2)                          ---- --AHL20(1)  XXXXXXXXXXXXXXXXXXXX>MIR1888<---------ARR11(3)        --------->ARR14(2)            ---- ------>AHL20(2)<---------AHL20(2)--------->AHL20(2) --------->AHL20(2)                      --------   ttatatactaaactaaattaaaatttgttaaaactttaaattaaatcttaatttttttaatatattgtggattcttaaacacaaaccaaaaaaaaaaaag  6752300                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                             <---------AHL20(2)                                                           --------->ANAC55(2)                                                           <---------ANAC55(2)                                                         <-----------GT1                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                     --------->AHL20(2)                                                 --------->AHL20(1)               --------->AHL20(1)                                                 <---------AHL20(2)               <---------AHL20(1) ------>CCA1(2)                      ----------->GT1 --------->AHL20(1)           <---------AHL20(2) ------ARR11(3)                     --------->DAG2   <---------AHL20(2)           --------->AHL20(2) ----->ARR11(3)                 --------->YAB1   --------->AHL20(2)            <---------AHL20(2)  -- ----->ARR11(1)           ------->TEIL          --------->AHL20(2)<---------AHL20(2)  <-----------GT1 -->DOF2         <---------ATHB12  ---------->DOF2   <---------AHL20(1)      <---------YAB1   -------   atatgagaaacaaaatccaatctagatgaatcaaacataaagtaatacaaattaattaattacttaattttataaaactattattttattacaaggttga  6752400  Previous    Next  AGI:  At2g15440.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G67210.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71903.1); contains InterPro domain Protein of unknown function DUF579, plant (InterPro:IPR006514) Range:  from: 6750695    to: 6751912    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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