Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <-----------GT1 ---ICU4                                    <-----------GT1 -->AHL20(2)                         --------->AHL20(2) -->ATHB51                         <---------DAG2        <---------------AtSPL8 -->ATHB12                         <----------DOF2       --------------->AtSPL8 ---AHL20(2)                    --------->REM1(1)   --------->YAB1             <---------ANAC58 ->ICU4        <----------DOF2  <---------ALFIN1   <-------TEIL                <---------ANAC58   ttgttttttcatgctgtctttagcctgttttgctacactttatatataacatattcatattagtacaatccagcaaaacttgcttactatttgtttttca  6684000                                                                                       <---------MYB52(1)                                                                                  --------->TOE2(3)                                                                               --------->ARR11(3)                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                  --------->MYB52(1)           <---------ARR11(3)                                                  ----------->RAV1(1)         --------->RVE1(1)                                      <---------AHL20(2)                      --------->CCA1(1)                 ----------->GT1  ------>ZmHOX2a(1)  ------->GAMYB      ------>ZmHOX2a(1)          --------------->AGL15  <---------------AGL15                 --------->TOE1(3)          <---------------AGL15  --------------->AGL15                 --------->TOE2(3)          =======================================MADS_MADS ----------->GT1--------->AHL20(2)      <--    <----------DOF2     <-----------GT1       --------->GLK1(2)  --------->AHL20(2)------>ZmHOX2a(1)   tgctgtctttagccaaatattgtatataacatattcctatttaagtagaatccaacagaataagttataaaatccttaaaatatcctcagttatctactt  6684100                <---------YAB1             --------->AHL20(2)             <---------AHL20(2)     --------->ATHB12          <---------ARR11(3)   <---------WOX13(1)          --------->AHL20(1) --------->ATHB12                      --------->AHL20(1)       ----------->GT1       <---------AHL20(2)                    --------->AHL20(2)   <---------WRKY18(1)      <---------AHL20(2)           ----------->GT1                            <  --------->WRKY38(1)   --------->AHL20(2)     --------->AHL20(2)  <---------AHL20(1)        <-------  ----------->HVH21     <---------AHL20(2)<---------GLK1(2)     --------->YAB1               --------  --------->WRKY12 <---------TOE2(3)<---------MYB46(3) ----------->GT1       ----------->HVH21     <-  --------->WRKY45---------->DOF2----------->GT1<---------AHL20(2) <---------AHL20(2)        <------- -------YAB1 <---------YAB1 --------->AHL20(2)<---------YAB1  --------->AHL20(2)          ---------->DOF2   atctttgaccagtatattattaaagttttattaattggtgattagattattatatagaagtgaaaataataaattttcagtgaccaaaaacaaaaagagt  6684200           <---------AHL20(1)           --------->AHL20(1)           --------->AHL20(2)           <---------AHL20(2)          --------->AHL20(2)          <---------AHL20(2)         <---------YAB1                                                          <---------ANAC58       --------->ATHB51                                                          <---------ANAC58       <--------HAHB4                                                        <<<<<<<<<SARD1       <---------ICU4                                                        <<<<<<<<<CBP60g      --------->ICU4                                                   --------->WOX13(1)      <---------YAB1                                                  <---------WRKY38(1)    --------->YAB1                                                    <---------WRKY12   <---------YAB1                                        --------->ANAC58   ------>MYB46(1)       --- ----------DOF2                   ---------->DOF2        --------->ANAC46   ------>MYB83     <------- --------AtSPL3         --------->AHL20(2)               --------->ANAC58 ------->GAMYB     --------- ------->AtSPL8         <---------AHL20(2)    --------->AHL20(2)      <---------WRKY45 <---------MYB59 --------DAG2        ----------->GT1   ----------->GT1 --------->MYB52(1) <---------MYB59   <-------- --------AtSPL8--------->YAB1 <----------ID1  <---------AHL20(2)     --------->WRKY18(1)------>ZmHOX2a(1)   accttttcattattaaattagaatattaaaaaaaaacaaaggggagaataaaatggcaaacgaaacctttggtcaaccaaatttcgtttcctaattaaat  6684300                                   ----------->TBP                      --------->ANAC58                                              <--------HAHB4                      --------->ANAC58                            --------->ANAC55(2)  --------->AHL20(2)        <-------TEIL ------>NtERF2 --------->AHL20(2)           <-----------GT1     --------->YAB1      --------->TOE2(2)          --------->HSFB2a(2)    --------->ANAC58           <---------YAB1      --------->TOE1(2)   <---------CCA1(2)             --------->ANAC58           <---------AHL20(2) -------->GT1       <---------ALFIN1                  ---------->DOF2     <----------DOF2 --AHL20(2)         --------->DEAR3(1)              --------->ANAC58     <---------ANAC58 >AHL20(2)         --------->MYB46(3)           <---------ANAC55(2)  *TSS<---------ANAC58         --- -AHL20(2)       --------->ANAC46<---------HSFB2a(2)--------->ANAC58 <------------CBF  <---------AHL20(2)   gggttaaacatacgtctatgagccacccatttcttctataaatactcatctcgtaagaaagcaaatttacatattgctttgttctataattaaacaaaac  6684400                                                                                                  ---                                                                     <---------ANAC58           -----                                                                     <---------ANAC58           <----        ----------->GT1              ---------->DOF2     <---------YAB1                         <----       >>>>>>>>>TBF1             --------->ANAC58     --------------->AGL15     ------>ZmHOX2a(1) <-- ------>YAB1                     --------->ANAC58  ------>ZmHOX2a(1) <---------AtLEC2           <----   tcataagaagaagaaaaacgatggctctctctggttcgcaaaagaaggttttcctacttgttatagccattgcatgtctctcctcttctcttgcagaggc  6684500                            --------->ALFIN1                          ----------->RAV1(2)                          --------->ZAT2                    <------NtERF2       <------ZmHOX2a(2)                   ------>NtERF2        <---------At4g35610                  <---------ANAC46     <---------ARR11(3)  <---------At4g35610 <---------ATERF1(1)------>ZmHOX2a(2)  --------->At4g35610 --------->MYB52(1)--------->At4g35610  <---------ZAT2  <---------ATERF1(2)  <---------ARR14(2)  --------->ZAT2  --------->bZIP60(1)  <---------AGP1 ------>ALFIN1    --------->ATERF1(2)  --------->ARR11(3)                           ------>ZmHOX2a(1) ---->ALFIN1      <---------bZIP60(1)  --------->ARR14(2)               <---------TOE1(2) -----ANAC58     --------->RAP2.6(3)   --------->GLK1(2)                <---------TOE2(2) -----ANAC58   ----------->TGA1       <---------GLK1(1)        --------->TOE2(3)  ----------->RAV1(2) ----NtERF2    ----------->HVH21  --------->ALFIN1    <---------ALFIN1 <-----------RAV1(2) -----ANAC46>>>>>>>ZML2 --------->MYB46(3)----------->HVH21 <---------ALFIN1<-------TEIL   gtggagctggagttctagtgacggcaacggctggggatggggatctgatggctctagcacctctacctcaggcccaggttcaactcctggtgattcaaac  6684600                                                                                   xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                --------->ANAC58                                                                                =====================                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                            xxxxxxxxxxxxxxxx>smallRNA(i)                                                                      <------MYB83 --------->ARR14(2)                                                                      <------MYB46(1) <---------HSFB2a(2)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     --------->ALFIN1 --------->HSFB2a(2)                                                                    --------->ALFIN1 <---------LBD16                                                                    ======================MYC_MYB                                                                    <--------P  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   =======================MYC_MYB                                                                   ----------------------->TaNAC69(2)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <-------GAMYB--------->O2        <                                                               --------->ALFIN1<---------LBD16     <-                                                       ------>ZmHOX2a(2)    ------>ZmHOX2a(2)     ---                                                      <------ZmHOX2a(2)    --------->PCF2        <---                                                     --------->ARR11(3)   <---------ARR14(2)     ----                                        --------->At4g35610 <---------DEAR3(1) <xxxxxxxxxxxxxxxxxxxxx                                        <---------At4g35610<---------ANAC46<------ZmHOX2a(2)     <---             <---------LBD16    <---------AtMYB61    <---------ARR14(2)   --------->ARR14(2) <-------    <-------GAMYB              <---------MYB52(1)    --------->ARR14(3)  xxxxxxxxxxxxxxxx>smallRNA(s)   <---------MYB46(3)        <-----------RAV1(1)     <---------ARR14(3)  <---------GLK1(1)  ---------   <---------DEAR3(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------AtMYB61--------->TGA1a -----  <---------ANAC58 <---------SPL7<---------MYB46(3)  <---------ARR11(3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------DEAR3(1)     --------->ARR14(2)    --------->STY1(1)  <---------ANAC46 <---------ARR14(2)  <---------ANAC58<---------GLK1(1)   <-----------GT1--------->ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <---------DREB2C(2)    <---------ARR14(2)    <---------STY1(1) <------NtERF2<---------ALFIN1 <-----   tctggcggttcaaaccctggaggtccgaattctggtggttttagctccccttggggatcttgggggtggggttggggatcccacggctctgggagcccgg  6684700   --------->MYB46(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxsmallRNA(se3) ====================bZIP_DOF ---------ALFIN1 -----NtERF2 --->NtERF2 ------TCP15(1)                                                                     <---------DAG2 ----->PCF2                                                                         <----------DOF2 xxsmallRNA(se3)               ---------->DOF2                                   <---------ARR11(3) ------TCP20                --------->YAB1                       --------------->AGL15 --LBD16                   <---------YAB1                        <---------------AGL15 >ATERF1(1)             <---------ZAT6          <---------WOX13(1)               --------->ARR11(3) - ->NtERF2 <----------DOF2--------->YAB1   --------->GLK1(2)   <-----------GT1---------->DOF2<-------- ----ATERF1(1)    <----------DOF2     >>>>>>>>>TBF1   <-----------GT1<---------AHL20(2)     ---------   ccccatccaatgctttatttcttttagtgataataaagaagaagaatttgagtgattttctattctactatataatgtagaaagaacttttctactagaa  6684800                                           <---------ANAC46                                           <---------ANAC58                                   <---------MYB52(1)                     --------->ICU4<<<<<<<<<MYB1                   <---------ICU4  <<<<<<<<<MYB2                                              -------                   <---------AHL20(2)      <---------ANAC58                                   <------              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      --------->AHL20(1)             <---------ANAC58  <------NtERF2                                             --------->AHL20(2)             --------->YAB1   ------------>AtMYB77                                       <---------AHL20(1)          <----------DOF2    --------->ALFIN1----------->GT1                            <---------AHL20(2)         <---------ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   --------->AHL20(2)         <---------ANAC58  <---------bZIP60(2)                                      <---------AHL20(2)    <---------ICU4--------->ICU4  <-------GAMYB   --------->ICU4                --------->AHL20(2) --------->YAB1   --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->AHL20(1) -------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<-----------GT1           <---------AHL20(2) -HSFB2a(2)  <---------ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          --------->AHL20(2) <------ >HSFB2a(2)  --------->ANAC55(2) <---------MYB46(3)<---------ICU4      <---------YAB1   <------------   aaataaaaattgctttcgtaataaatatgaggtggcagttagattgagtgtaatatttgcaatacccaaacttatgaaaaaataaaataaatattttagg  6684900  Previous    Next  AGI:  At2g15340.1    Description:  glycine-rich protein Range:  from: 6684369    to: 6684901    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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