Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <<<<<<<<<GT-1                          <-----------GT1                     <---------AHL20(1)                     <---------AHL20(2)                     --------->ARR11(3)                     <---------ARR11(3)                --------->AHL20(2)                     --------->AHL20(2)          --------->ARR11(3)                     --------->AHL20(1)          <---------ARR11(3)                 --------->AHL20(2)              <---------AHL20(1)                 <---------AHL20(2)              --------->AHL20(1)              <---------ANAC46                --------->AHL20(2)             <---------AHL20(1)                <---------ANAC55(2)             <---------AHL20(2)                --------->ARR11(3)                <---------ANAC58             --------->AHL20(2)                --------->AHL20(1)                --------->ANAC55(2)            <---------AHL20(2)          --------->ANAC58                         <---------ANAC58            --------->AHL20(2)          --------->ANAC58                         <---------ANAC55(1)            --------->AHL20(1) ------>MYB46(1) <---------ARR11(3)               <<<<<<<<<NAP    <---------YAB1--------->AHL20(2)    --------->ANAC46                      --------->TOE2(2) --GLK1(2)  <---------AHL20(1) ------>MYB83   --------->YAB1          <-----------GT1  --------->ZAT14   tcaaatatgaaaaataaaattaatatattaaccaaatagtataagcaaaaatattttttatatagtttcaaataacaaaacttacgtgctacagtcaaat  6677100                    --------->ANAC58                    --------->ANAC58            <-------TEIL       ============================RAV                                      <---------WOX13(1)       <-----------RAV1(2)     --------------->AGL15                      --------->ATHB12      ------>MYB83 --------->DAG2     --------->MYB59                <---------ZAT14      ------>MYB46(1)         <---------ANAC55(2)                 --------->At4g35610      -------->P  ---------->DOF2     <---------TOE2(3)           ----------->RAV1(2)     ----------->RAV1(1)      --------->ANAC55(2)                 <---------At4g35610         -------     --------->MYB52(1)  <---------ICU4----------->GT1       --------->ATHB12 <---------At4g35610 ---    --------->AtMYB61  ----------->RAV1(1)      <---------YAB1  ------>ZmHOX2a(2)      --------->ANAC46   ttgggaccaacaggtgcgaataaagcaacattacataatttaggtaaattatcaaacttgtattgatcggctgaagtgattgctgcttcactcgacaaac  6677200                               <-----------GT1                              <-----------GT1                    <---------YAB1                                                            -------         --------->YAB1 <---------TOE1(2)             --------->ANAC46                        <------      <---------CCA1(2) <---------TOE2(2)             --------->ANAC58                       --------   ------->TEIL   --------->YAB1              <---------DAG2                   <---------ANAC58 <-------TEIL   --------->ARR11(3)            <----------DOF2      --------->GLK1(2)       --------->ALFIN1 -->MYB52(1)    <---------ARR11(3)         <-----------GT1     ----------->RAV1(1)      <-----------RAV1(1) ------>At4g35610<------ZmHOX2a(2)   <----------DOF2  --------->ANAC58         <---------ANAC58    --   agatgcacatatcatgacgatcatcatacgttttaacacctttattcactttatctaagccactgcaacattctggtgatggcttagcttctggtggagc  6677300                                   <---------ANAC58                                   <---------ANAC46                                ---------->ID1       --------->TOE2(3)      <-----------RAV1(1)                                               ----- -->TCP20                     <---------MYB46(3)                            <---------TOE2(3)   <---- ---PCF2                   <---------ARR11(3)   ----------->GT1 --------->At5g28300   --------->AtLEC2 ->ATERF1(1)               --------->ARR11(3)--------->ANAC46  ----------->GT1   ----------->HVH21<-- -------->DOF2    ----------->GT1  <---------ANAC58  <-----------GT1    --------->TOE2(3)      <-----   ccaaaggtacctcaaacaaggtgttaaaagatttgttgcttcttcacacggtgttaaactatacactgtaaaaacattaagatgtgacatgaaaatggtg  6677400                                                             <---------WOX13(1)          <---------MYB46(3)     --------->YAB1                                        --------->ATHB12       <----------DOF2 ---->ATHB12                   ------>ZmHOX2a(1)          <---------YAB1    <---------ARR14(2) -----MYB46(3)                --------->TOE2(3)--------->ATHB12*TSS         --------->ARR14(2)      < -------WOX13(1)          <---------GLK1(1)   <---------AHL20(2)          <---------MYB46(3)     ---- ----YAB1---------->DOF2  --------->GLK1(1)   --------->AHL20(2)      <---------AtMYB61  --------->MYB52(2)   attgcaatgacaaaagctattgagatggatttcctcatttttgtttgtttaattgggattgtgattgggattttggtggttcttctttggtttgtgggaa  6677500                                                 ------>ZmHOX2a(2)                                                 ====================================HOX2a_HOX2a                                               <---------ARR14(2)                                               <---------AGP1                                               --------->ARR14(2)                            <-------       <-----------GT1                     ------->MYC3                                      --------     <---------AHL20(2)                    <-------MYC3                                    ---------- <---------AHL20(2)                --------->AHL20(2)      --------------->AtSPL8        ---------->DOF2 --------->AHL20(2)             ------->TEIL   <---------ARR11(3)<----------DOF2  <---------AHL20(2) ---------AHL20(2)         <---------At4g35610 --------->ARR11(3)<---------DAG2 <---------RVE1(1) ----->ICU4                --------->At4g35610<---------CCA1(2)------->TEIL   <------ZmHOX2a(1)   aaattatttatacaacttgtcttagtgtctgatgcatttaaaacatgtggatcttatttcatatgtacttttttatattaggatttttttaaaaagataa  6677600                                                                          <---------AHL20(2)                                                                         --------->AHL20(1)                                                                         --------->ARR11(3)                                                                         <---------ARR11(3)                                                                         <---------AHL20(2)                                                                    --------->AHL20(2)                                                                --------->AHL20(2)                  --------->YAB1         <---------ARR11(3)     <---------AHL20(2)    --------->AHL20(2)                 <---------YAB1          --------->ARR11(3)    --------->AHL20(2)    --------->AHL20(2)                <-----------GT1        <---------AHL20(2)      <---------AHL20(2)    <---------AHL20(2)               --------->YAB1       <---------AHL20(1)         <---------AHL20(1)    <---------AHL20(1)              <---------YAB1        --------->AHL20(1)      --------->AHL20(2)       --------->AHL20(1)        --------->AHL20(2)         <---------AHL20(2)       <---------AHL20(2)<-----------GT1      ----------->GT1          <---------------AGL15 <---------TOE2(3)   <---------AHL20(1)--------->AHL20(2) --ARR11(3) <---------ICU4     --------------->AGL15 <---------TOE1(3)   --------->AHL20(2)<---------AHL20(2) ->ARR11(3)--------->ICU4 <---------ANAC58          <---------DOF5.7(2) --------->AHL20(2)<---------AHL20(2) ->GT1<---------ANAC55(2) <---------ANAC58          ---------->DOF2 <---------AHL20(2)<---------AHL20(2)   tttgtattatgtaaatattatcattttgtcttgctatatatattatcttgaagttaaagttttaaattatttaaatatatttacaaatttaatttatata  6677700                                                                                    --------->AHL20(1)                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                                    <---------AHL20(1)                                                                               --------->AHL20(2)                                                                             --------->AHL20(1)                                                  <---------ICU4           XXXXXXXXXXXXXXXXXXXXX>MIR864-3P                                               --------->YAB1           --------->AHL20(2)                                               <---------ICU4        --------->TOE1(3)                                              <---------AHL20(2)     --------->TOE2(3)  ----------->GT1              <---------ICU4           <---------YAB1             <-----------GT1  --------->CCA1(1)             --------->ICU4         --------->GLK1(2)          <---------ICU4<---------AHL20(1)           --------->ANAC46         --------->ARR14(2)        <---------YAB1--------->AHL20(2)      --------->ANAC46              <---------ARR14(2)        <---------AHL20(2)   --------->RVE1(1)    <-----------GT1  <----------ID1<---------GLK1(2)          --------->AHL20(2)<---------AHL20(2)   gtctttctactacacataattagaggccaaatacctagaatctgataaataataactactatatataattaccttaaaatatataatatcttgaaaaaac  6677800                                                  --------->AHL20(2)                                                 --------->AHL20(2)                                              --------->AHL20(2)                                              <---------AHL20(2)                                             --------->AHL20(2)                                           --------->YAB1            --------->MYB52(1)             <                                          <---------AHL20(2) <-------TEIL                         ---               <----------DOF2           --------->AHL20(2)<---------GLK1(2)             <-----------HVH21   tatttaagagtctcagacttttatatgaacaatgaaatctatatataataaataaaaaatagattcacaaataactgaaacattctccatttgtcacatg  6677900            ---------->ARF1                        <---------DAG2        <---------ANAC58                     ------>MYB83        <---------ANAC58             <----------DOF2                      ---------->DOF2   --------->At4g35610   <-----------GT1     ------>MYB46(1)             --------->AHL20(2)   <---------At4g35610   --------->ZAT6    <---------MYB59               <---------AHL20(2)<--------- ----------DOF2        <-----------GT1  <-----------GT1       --------->TOE2(3)---------->DOF2------- ---->TEIL  <---------CCA1(2)     <---------AHL20(2)<----------DOF2 <---------AHL20(2)    <----------   tactttgctgacttgtctctcaaattttcactatattttctttaaccaaattgccttttctctaacttaattcatttaaagaaaagaagtttttaacctc  6678000  Previous    Next  AGI:  At2g15325.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to LTP4 (LIPID TRANSFER PROTEIN 4), lipid binding [Arabidopsis thaliana] (TAIR:AT5G59310.1); similar to putative lipid transfer protein [Helianthus annuus] (GB:AAP47226.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and hydrophobic Range:  from: 6676736    to: 6677463    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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