Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------AHL20(2)                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                     --------->ATHB12                                                                    <---------ATHB12        --------->ANAC46                                            --------->ICU4  --------->AHL20(2)                                                <---------YAB1                  -  <---------AHL20(2)   <---------GLK1(1)                           <---------TOE2(3)         -------- -->AHL20(2)         <---------AtLEC2     --------->YAB1   <---------AHL20(2)      --------->YAB1   <   aaatttatatactcaagttttttgcatatcagtttctaatgaaatcatatgtattggtttttttattctaatgatttatttctaatgaaaataagaagtt  6660500                                                                          --------->YAB1                                                                         <---------YAB1                 --------->At4g35610                                 <---------ANAC58       <---------AHL20(2)                                            <---------ANAC58       <---------YAB1                                           <---------ICU4                -------   --------->AHL20(2)                                           --------->ATHB51   --------->LBD16   <---------AHL20(2)      <---------ANAC55(2)                  --------->ATHB12 <---------LBD16 -------->AHL20(1)         --------->ANAC55(2)                 <---------YAB1  <---------ARR14(2) --->GT1  <---------WOX13(1) <---------AHL20(2)             --------->AHL20(2) --------->GLK1(2) ---------AHL20(1)      <---------MYB52(1)                  <---------AHL20(2) --------->ARR14(2)----   aatatttttttaattgatcatcttcccttacttaattgtttctaataagacttatgctctgttttattattgcttatcaaaaatccggtttgatattttg  6660600                                        ------>ZmHOX2a(1)                                   <----------DOF2                                  <---------ANAC58                                              <----                                  <---------ANAC58                                           --------                             <---------ANAC46                                               ---------                             <---------ANAC55(2)                                            <--------     <---------At5g28300     --------->ANAC55(2)      --------->AHL20(2)           --------->ANAC58    <-----------GT1          <---------ANAC55(1)      --------->YAB1          ------->TEIL----------- -------->AtSPL8             <---------ANAC58      --------->YAB1      <---------------------WRI1 ------>ID1<----------DOF2   <---------ANAC58------->TEIL      <---------CCA1(2)   --------->ANAC58   ttccatttaccatctttatgcaattccagtttcgtgtctttcctatgcacctctaataatattccatatcgctggtgatgtactcaaggaataagattct  6660700                                     ----------->HVH21         --------->HSFB2a(2)       --------->At4g35610         <---------HSFB2a(2)      <---------ARR14(2)         <---------------AGL15    --------->GLK1(2)         --------------->AGL15    <-----------ARR10                                           <------ -----YAB1                        --------->ARR14(2)                 <-----------------AGL1<---------ICU4 ->GLK1(2)                    --------->ANAC46                     <----------DOF2       ----------->RAV1(1) >ARR11(3)        ---------->DOF2<---------GLK1(2)         ------>ZmHOX2a(1)       <----------ID1 -GLK1(2)--------->HSFC1(1)<---------ZAT14                 --------->ICU4       ---------->DOF2 >ARR10  <---------HSFC1(1)--------->ZAT14     ------>ZmHOX2a(1) --------->At4g35610<------ZmHOX2a(1)   gatatatgcttctagaatgagaaagacagaacacagaatctgaccagtcctgctctgtgtcctaatgagctttcgagtttggaaaaggacacaacattac  6660800                                                     <----------DOF2                     <----------DOF2                 <---------DAG2                <---------AHL20(2)                  <---------DAG2               --------->AHL20(2)              <----------DOF2               <---------AHL20(1)  <---------------AGL15                 *TSS                      <-               <---------AHL20(2)  --------------->AGL15            ------------>CBF        <--------      ------>ZmHOX2a(1)           <-----------------AGL1         <----------DOF2      <----------DOF2     --------->TOE2(3)            <-----------------AGL2   <---------ANAC58           =============== -----GT1      --------->AHL20(1) <-----------------AGL3   <---------ANAC58     <---------ATHB12 <---   ctctcttccttagggaatttattcttttccagcctttcttctaatgggactttgcctttttgcttgcctttacaatctgcaaatcaaactttcagttatt  6660900            --------->TGA1a                                                                         <  ====================bZIP_DOF                      --------->ZAT2                                 --  <----------DOF2                    ------>ZmHOX2a(2)                                             <- ----------GT1<---------ANAC46      <------ZmHOX2a(2)                    --------->ZAT2            <- -MYB52(1)  <---------TGA1a        --------->ARR11(3)                    --------->At4g35610------->TEIL =====================bZIP_DOF     <---------ARR11(3)       ----------->GT1        <----------DOF2 -- ------AHL20(2) ----------->GT1    <---------AGP1   <---------ZAT2      --------->GLK1(2)  <---------CCA1(2)   ttttcttttctctcatgtgtgtaaaatactcttcatagatctcatataagtccaagcttgaattgaaatatcagaagctgtgtttctttcactgtatcta  6661000                                                                                              <------MYB83                                                                                             <-------                                                                                             <-------                                                                                            <--------P                                                  <----------ID1                           <-------GAMYB                                              ---------->DOF2                    <------ZmHOX2a(1)                                           <---------ANAC46                     --------->ICU4<------MYB46(1)                                           <---------ANAC55(2)                 <---------TOE2(3) ------>ZmHOX2a(2)                  <---------ARR14(2)                    --------->DAG2  --------->ATHB12 ------ZmHOX2a(2)                   --------->ARR14(2)                   ---------->DOF2  <---------MYB46(3) ------->ARR14(2)                   --------->ARR11(3)            ------>ZmHOX2a(1)       --------->MYB55(2) --------ARR14(2)                   <---------GLK1(2)---------->DOF2---------->DOF2      <---------YAB1 --------ARR11(3)                   <---------ARR11(3) --------->DAG2--------->DAG2   <---------YAB1 ------->ARR11(3)      <---------REM1(2)   --------->ANAC55(2)   --------->TOE2(3)--------->ARR11(3)   agatccttgtttttgttttttgttctacatgggagccagattttcacgtatagcgaaaaggtttcttcctaaaagtaaagtaaggattttgatggttggt  6661100                                                                   <---------YAB1             <------                         ------>ZmHOX2a(1)                       <---------------AGL15  <----------DOF2                         <----------DOF2                 <---------ZAT14         <---------bZIP60(2)       <-----------RAV1(2)                               --------->ZAT14         <---------ANAC46   <---------MYB46(3)   --------->TOE2(3)  --------->HSFB2a(2)  <-----------------AGL3<-------------- --AtMYB61            ------>MYB46(1)      <---------HSFB2a(2)  <-----------------AGL2------->TEIL --MYB46(3)           ------>MYB83<---------REM1(1)<-----------HVH21          ----------->HVH21   cttgatggttcagggaagactaccatcctttacaagttgaagcttggagaagttgtcacaacagtgcctactattggtatgtgacatggacttttcttct  6661200                                                                                      <------ZmHOX2a(1)                                                                                    <---------TOE2(3)                                                                               --------->ATHB12                                                                               <---------AHL20(2)                                                              <-----------GT1 --------->AHL20(2)              <-------GAMYB                              <---------YAB1 <---------ARR11(3) ------------------ANAC81         <---------GLK1(2)  --------->ARR11(3) --------->ARR11(3)    <------ ----------ANAC81        <---------CCA1(2)           <---------ARR11(3)<---------CCA1(2)   <---------YAB1   cttgtttttttggttctgttgagacttctatctattgattctgaagttagagcaagatgttgattcactctatatatctatttattgaggattatgaagg  6661300                                                  <----------DOF2                             <------                                               <---------ARR14(2)                         <---------ICU4                                               --------->ARR14(2)                      --------->YAB1                                 --------->ARR14(2)<---------YAB1                     <------ZmHOX2a(2)                             <---------ATHB12  ------->TEIL                          --------->ARR11(3)                            ------>MYB83       <---------ARR11(3)                    <---------ARR11(3)                            -------->P <----------DOF2        --------->YAB1  <---------ARR14(2)    < <----------DOF2            ------>MYB46(1)   <---------CCA1(2)             ----------->ARR10<------- ---TOE2(3)           --------->At4g35610 <---------ANAC46   <------ZmHOX2a(2)--------->ARR14(2)   --   aaactttgtttggctagttagaactgctccaaccatatatacttttgtgtatctttattgtggatcatagctcatgtgtagatactagatcatagttaca  6661400  Previous    Next  AGI:  At2g15310.1    Description:  ATARFB1A (ADP-ribosylation factor B1A); GTP binding. Identical to Probable ADP-ribosylation factor At2g15310 [Arabidopsis Thaliana] (GB:Q9SHU5); similar to ATARFA1B (ADP-RIBOSYLATION FACTOR A1B), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT5G14670.1); similar to ATARFA1F, GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT1G10630.1); similar to ATARFA1E (ADP-RIBOSYLATION FACTOR A1E), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT3G62290.1); similar to ADP-ribosylation factor 1 (GB:P51821); contains InterPro domain Ras GTPase; ( Range:  from: 6660873    to: 6662583    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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