Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      --------->ZAT6 ----->GLK1(2) -----GLK1(2)                                  ------>ZmHOX2a(1)          ---------->DOF2 -----ARR11(3)                                --------->TOE2(3)         --------->YAB1 ---->ARR11(3)<----------DOF2              --------->ARR14(2)     ------>ZmHOX2a(1)   <-----------GT1 ->DOF2       <---------DAG2               <---------ARR14(2)    --------->TOE2(3) ----------->GT1   ttcttcacactaagcacttttcaaaatttcaattctgaaaactcaaatcctaaattgttatctacttcctaaaatcaaaagcagattgtaactaatttcg  6650700                                                  ---------->DOF2                                            ----------->GT1                                          <---------ANAC58                                          <---------ANAC46                                          <---------ANAC58                                         --------->STY1(2)                                         <---------STY1(2)                   <----------DOF2       <---------ZAT2                                        ------              <-----------GT1        --------->At4g35610                                 <---------ANAC58       <------ZmHOX2a(2)             <---------ZAT2 --------->DAG2        ----------->RAV1(2)  <-----      <---------ARR11(3)             <---------At4g35610  ----------->ARR10              <---------ANAC58      --------->ARR11(3)             --------->ZAT2--------->DAG2        --------->GLK1(2)<----------DOF2   atttgttagatcattttctctctttctacattcaatttcagctagcttgtgaaaaaggcgaagaaatggatagagaacctgagcgagttttgctttgtcg  6650800                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                ------>ZmHOX2a(1)                                                                                <-----------------AGL1                                                           <---------ANAC46     <-----------------AG                                                           ----------->GT1     --------->TOE1(2)                --------->ANAC58                   --------->LBD16            ------>ZmHOX2a(2)                --------->ANAC58                  --------->DEAR3(1)         <------ZmHOX2a(2)          <---------LBD16                         <---------ANAC46          --------->ARR11(3)         <---------LBD16                         <------NtERF2              <---------ARR11(3)      <---------YAB1                            ------>NtERF2               <---------ARR14(2)    <---------ICU4                  --------->GLK1(1)    <------MYB83       <---------GLK1(2)   --------->ICU4                   --------->CCA1(2)    <------MYB46(1)    --------->AGP1 --->ETT(2)   --------->MYB52(1)   --------->ARR14(2)   <---------AtMYB61   --------->ARR14(2) ----ETT(2)--------->LBD16         <---------ARR14(2)<---------MYB46(3)   ----------->ARR10   acctcattatcaccgggaacggaagacggagaagtcggatatgaaaatgccaccgtggatggtgtgaaactaggtttagatcctccgatttggaaaccgt  6650900                       --------->CCA1(2)                   <---------WOX13(1)                  <-------GAMYB                      <---------At4g35610                <---------ANAC46                     <---------ZAT2               <------NtERF2                 <<<<<<<<<TBF1              ------>NtERF2          <---------MYB46(3)             <---------DEAR3(1)  --------->ALFIN1    --------->At4g35610                 --------->REM1(2)             --------->ALFIN1    <---------AtMYB61   --------->ZAT2              <------NtERF2          <---------DEAR3(1) <------ZmHOX2a(1)  <---------LBD16                <---------ANAC46    <-   agacggacagagacggtggcgattgatatgaggagatggtggttttcttcttcggagctaagagaagtggattaaacaatggcagggagcgagtagagag  6651000                                                                       <------NtERF2                                                                      ------>NtERF2                                                                     <---------ATERF1(2)                                                  --------->ANAC46   <---------DEAR3(1)                                                  --------->ANAC58  --------->RAP2.3(1)                                                  --------->ANAC58  <------NtERF2                                                 --------->SPL7    <---------ATERF1(1)                                               --------->ARR14(2)  <---------RAP2.3(1)                                               <---------ARR14(2)  <---------DEAR4(2)                                             <---------MYB46(3)    <---------ORA47(2)                                           <------NtERF2           ------>NtERF2                                           <---------LBD16         <---------RAP2.6(1)                                          <---------ATERF1(1)      --------->LBD16                                          <---------RAP2.3(1)     --------->ATERF1(2)                                          ------>NtERF2           <---------DEAR3(1)                                         --------->O2             --------->DEAR3(1)                                         <---------RAP2.3(2)      <---------ATERF1(2)                                         <---------O2             <---------RAP2.3(2)                                         <---------DEAR3(1)      --------->ATERF1(1)                                    <---------ANAC58  --------->LBD16--------->ATERF1(2)             --------->ATHB12       <---------ANAC58<---------LBD16<---------ERF1      <-------GAMYB--------->HSFB2a(2) <---------ATERF1(1)<------ZmHOX2a(1)       --------->ATHB12     --------->MYB55(2)           --------->SPL7--------->CCA1(2)<---------LBD16 --------->ICU4     <---------MYB46(3)  ----------->RAV1(2)<---------ANAC46    <---------ATERF1(1) <---------WOX13(1)     ----------->GT1   <---------GLK1(1)--------->ATERF1(1)<---------ARR14(2)    <---------YAB1 <---------AtMYB61 <---------HSFB2a(2)----------->HVH21<------NtERF2--------->ATERF1(1)      <------- ---------DOF2  --------->ALFIN1<---------SPL7<------NtERF2<-----------ARR10     <---------ZAT6     <   gctttggtggttaaatgagtgctggaaacctggccgtagcgcgacggcggatacgccggaggaactcgccggcggcaagagtagtgattgcatatttttt  6651100                                                                                                   --                                                                                                  ---                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              <------                     --------->DAG2                                                           <------                    ---------->DOF2          <---------TOE2(3)                      <---------ANAC58          <---------------AGL15              <---------TOE1(3)                      <---------ANAC58    ----------->GT1 <---------ZAT14     --------------------->WRI1            <---------DAG2  <------ --AHL20(2) <---------AHL20(2)          <----------DOF2      <---------REM1(2)<----------DOF2 <------ ---------ZAT14    *TSS       <------------CBF     <---------ANAC46  ------------>CBF<----------DOF2   agtggagagtttattttaagagtaaagtagcgaattggtgttcttttaaggcttcgtctattcttcacagttgcaatgggctttttgcttttgctaccta  6651200       --------->YAB1    <------------CBF ----->GAMYB ------>MYB46(3) ----->RAP2.6(3) ->MYB46(1) ->MYB83<---------TOE2(3)                              <---------ARR14(2) ---->MYB52(1)     <----------DOF2                     <---------ARR11(3) --->MYB55(1)   <-----------GT1                        --------->ARR11(3)                     <------ ----->HVH21    <---------AHL20(2)                    --------->CCA1(1)                       ------- ---MYB46(2) --------->ARR11(3)                       --------->RVE1(1)       <-----------GT1 ------- ---MYB52(2) <---------ARR11(3)                     <---------GLK1(2)      <---------ICU4 --------->ANAC46 ---MYB59  --------->GLK1(2)       ---------->ID1 ------->GAMYB <----------DOF2           --------->ANAC55(2) ---MYB111(1)--------->AHL20(1)<----------DOF2 ----------->RAV1(1)   --------->YAB1  <----------DOF2 ---MYB111(2)<---------AHL20(1)--------------------->WRI1 <----------DOF2 --------->ICU4 <---------LBD16   acggcccattgagaatattttcttttcttcattctttgtttttttggtccaacagaatatctttttctttagcataatttttacaatcttttacggagtt  6651300                                                           --------->ATHB12     --------->AHL20(2)                                   <---------AHL20(2)  --------->YAB1              --------->ARR11(3)          <---------YAB1  --------->TOE2(3)           <---------ARR11(3)  <---------At4g35610            <---------ATHB51 ---HSFC1(2)              ---------->DOF2         ----------->RAV1(2)     --------->CCA1(2) -->HSFB2a(1)            <---------AHL20(2)       --------->At4g35610--------->YAB1 -->HSFC1(2)    ----------->GT1               <-----------HVH21  ---------->DOF2 --------->ICU4<-----   tctaccataaaatagacaatgttatatataaagatttagttttttttttgtcacctgaatttcattgaaaagcatgatatgaaattatggtgagattaca  6651400                                 --------->ANAC58                                 --------->ANAC46                              --------->ANAC46                              <---------WRKY38(1)                              --------->LBD16                              <---------WRKY12                                <---------HSFB2a(2)                             --------->SPL7                             <---------HSFB2a(1)                            ------>NtERF2                               --------->HSFC1(2)                           <---------ZAT18                              --------->HSFB2a(1)                         --------->At4g35610  --------->LBD16          <-----------ARR10                         <---------At4g35610 --------->ANAC46       --------->ANAC46                         <------NtERF2       --------->LBD16        --------->ANAC58                    --------->ANAC58        <------NtERF2           --------->ANAC58                    --------->ANAC58        <---------HSFB2a(2)<------ZmHOX2a(1)--------->LBD16                  ---------->DOF2--------->ANAC58        <---------LBD16<---------HSFC1(2)               <---------At4g35610          <---------LBD16 <------NtERF2     --------->HSFB2a(2) ---        ---------->DOF2 --------->MYB52(1) <---------LBD16 --------->LBD16   <---------LBD16     ---- ----YAB1      --------->At4g35610------->GAMYB    <XXXXXXXXXXXXXXXXXXXXMIR773--------->LBD16  >>>>>>   aatgcccaaacaaaggaagctaaagccagcggacaacgaaacagtccccggagacaagagccggaggaaaacgaaacttccccgaaaactaggccctaac  6651500                                    <---------ARR11(3)                                  --------->ANAC58 ----------->GT1                  --------->ANAC58 ------>MYB52(1)              --------->ANAC58 ------>DOF2<------ZmHOX2a(2) --------->ANAC58                       --------->TOE2(3) >>>MYB98 --------->YAB1    ---------->DOF2            ---------->DOF2            --------->MYB46(3)   aaagggaaacaaggatcacaactagaattacaaagcaagaaatttcaaaccagtttcgaaagagggcaatcccttaaacatagaacaaacacaaataggt  6651600  Previous    Next  AGI:  At2g15290.1    Description:  ATTIC21/CIA5/PIC1/TIC21 (CHLOROPLAST IMPORT APPARATUS 5); copper uptake transmembrane transporter/ iron ion transmembrane transporter/ protein homodimerization. similar to unnamed protein product [Vitis vinifera] (GB:CAO47863.1) Range:  from: 6649382    to: 6651119    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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