Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->YAB1                                        <---------ZAT14                                 ---------->DOF2                                        --------->ZAT14                              --------->AtMYB61                                        <---------ZAT18                            ----------->RAV1(1)                                        --------->ABI4(2)                         --------->DEAR3(1)              --------->ZAT14       ------>ZmHOX2a(2)                             <---------ALFIN1             <----------DOF2        <---------DEAR3(1)                            --------->AtMYB61          <---------ALFIN1         <------ZmHOX2a(2)                             --------->MYB46(3)    ------->MYC3                  <---------ARR14(2)                             <---------MYB55(2) <    <-------MYC3          <---------TOE1(2)    <----------DOF2                 --------->ANAC46    -- --ARR14(2)  <---------DAG2       --------->ARR14(2)       <---------MYB46(3)------>ZmHOX2a(2) <-----   tgcacacatgttccactttagtctctcccatgttcggatcggtgctctcctttcataccatcggttgtactcatcttgatcccaccaccacaaagcacta  6596800                                         <---------ANAC46                                       <---------At4g35610                                        <--                          <---------ANAC58                   --------->YAB1                      ----               <---------ZAT18         --------->ZAT14       ----------->GT1         --------->ZAT14 ---------MYB52(1)        <---------ANAC58            --------------->AGL15          <---------ZAT14 ------->TOE1(3)      ---------->DOF2  <---------ZAT14<---------------AGL15      <---------ALFIN1<--- ----ALFIN1------>ZmHOX2a(1)  ---------->ID1       ------->TEIL          <-----------GT1       <xxxxx   cccttaagttgtcctagggcaatcgaaagcttgtcttcttgtgctgtggaatgaaactcaaaatagtaattcatattactctcccactgtagatagccca  6596900                                                                   <----------DOF2    --------->TOE1(2)                                                                <-----------GT1    ---------->DOF2                                      <---------YAB1 --------->AHL20(2)         <--------P          ---------->DOF2 <---------MYB52(1)         <---------AHL20(2)       <---------ANAC46 --------->LBD16        <---------ANAC55(2)         <---------AHL20(2)        ----------->GT1 ------>ZmHOX2a(1)      --------->ANAC55(2)         --------->AHL20(2)      --------->ZAT18 -------ATHB12       --------->ARR14(2)             <---------ATHB51   <---------ANAC58 ----->ARR14(2)      <---------ARR14(2)--------->YAB1--------->AHL20(1)<---------ANAC46 ------ARR14(2)<---------GLK1(1) <-----------GT1    <---------ATHB12   <---------ANAC58   <------ZmHOX2a(1) xxxxxxxxxxxsmallRNA(i)<-------TEIL   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->ALFIN1   atcctgaaaacaaaaagaattcaggtccgtaagttttactaccattatgcacaaataatttgtatataactttgcgagtggggtagaaagtaggatagaa  6597000                                                        <---------bZIP60(2)                                                        <---------ANAC58                   <---------At4g35610                                                        <---------ANAC58                <-------TEIL                                                        <---------ANAC46         <---------ARR14(2)                                                        <---------AtLEC2       --------->MYB55(2)                                                   <---------ANAC46            <---------MYB46(3)                                 <---------ANAC58  --------->ALFIN1           <---------AtMYB61                                 <---------ANAC46 <------NtERF2              <---------MYB52(1)                                 <---------ANAC58<---------MYB46(3)        <---------MYB46(3)                           <-------TEIL          <---------DEAR3(2)        <---------AtMYB61 --------                          <------ZmHOX2a(2)     <---------DEAR3(1)      <-----------HVH21<-----------RAV1(2)                         --------->ARR11(3)    <---------ABI4(1)       ------->GAMYB --------->LBD16       <---------ANAC58  --------->AGP1        <------NtERF2        --------->MYB52(1) <-----------HVH21       <---------ANAC58  <---------ARR11(3)  <---------DEAR3(1)  <----------DOF2 --------->ARR14(2)       <---------ANAC46 --------->GLK1(1)    ---------->CDC5   --------->At4g35610 <---------LBD16<--   attggtcttgggtatgggattccatgagatccatggcttcgaatagctcggcggtgtggcatggctgctataacggtctggtggttccggttcaggtgct  6597100                    --------->GLK1(2)           --------->ANAC58                    <---------ARR14(2)          --------->ANAC58              --------------->AtSPL3        --------->ARR14(2)<---------ZAT2      <---------ICU4                  <---------------AtSPL8   ----------->RAV1(2)    --------->ZAT2     <---------YAB1                   <---------------AtSPL3 --------->AtMYB61  --------->ARR14(2)     <---------ICU4       --------->GLK1(2) ->ALFIN1      ------>ZmHOX2a(1)           --------->YAB1       <-----------ARR10                  <- -------ALFIN1--------->TOE2(3)           --------->ICU4     --------->MYB46(3) <---------SPL7  -----   ccaccatctggttcttcctcaaaatccgagcttgatgagtagccatcatcatgccatgactcaacaaatctagtctcgttgtagtacgagtcttgactac  6597200                                                                         --------->ANAC58                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                     --------->SPL7                                                                 <---------------AtSPL8                                                                 --------------->AtSPL3                                                          <---------AHL20(2)                                                          --------->AHL20(1)                     --------->AGP1                       <---------AHL20(1)               ---------- ------TEIL------>ZmHOX2a(1)     <---------YAB1           --------->AHL20(2)       ----------->GT1 ---->REM1(1)    <---------At4g35610                     --------->AHL20(2)  ---------->DOF2      ---   atccatatgagtcctcttcatcagagctagagtagattattgtctccatcgttctcaaattttatttgtggtacctcgccaaagagagtaaaacaaagaa  6597300                                                                            <----------DOF2                                                                          ---------->ID1                                                                         <-----------GT1                                                                        <<<<<<<<<<GT-3b                                                                    --------->AHL20(2)                                                                    <---------AHL20(2)     ------->TEIL                                               <---------AHL20(2)  <---------ATHB12 <---------LBD16--------->MYB46(3)            --------->AHL20(2) >DOF2 --------->YAB1 <------ZmHOX2a(1)           <-----------GT1  <---------AHL20(2)              <- --------->CBF     <-----------RAV1(2)         --------->YAB1  --------->AHL20(2)            --------   gacaatgaatcagaacttaactcaggaagtaagtcaacaaataagtcaaaaataacaaaacacgatttatttatttttctttttaaaaacgagaatagca  6597400                                                                     <---------ATHB12                                   <---------AHL20(2)          --------->ANAC58                                  <---------YAB1           --------->HSFB2a(2)                           <---------AHL20(2)              <---------HSFB2a(2)                           --------->AHL20(2)           --------->ALFIN1                       <-----                          --------->AHL20(2)         <---------TOE1(3)        <------------CBF<------ -----------CBF      ------------>CBF                <---------TOE2(3)--------->YAB1      ------>MYB83 --->GT1   <-----------GT1--------->YAB1     <-----------GT1   --------->ANAC58           ------>MYB46(1)   aaattgaaacaaataacaaactagacaattaaaatttttattttgtttcactattaaggttgtggaagcaaatcaaaacaaattgcaaaaccaaattttt  6597500                      --------->AHL20(2)                 ---------->DOF2                  --------->AHL20(2)                ----------->GT1                 --------->AHL20(2)             ---------->DOF2                                 XXXXX ----YAB1    --------->AHL20(2)             <------------CBF                                    XXXXX ---AHL20(2)<---------AHL20(2) --------->MYB52(1)   <----------ID1        <---------DAG2  <----------DOF2   atggggttttcgatttaaaataaaaaaaatgaataacgaaaacagaaattgaaagggataaaagggaacgagttcaccttatgggattggagcttttagc  6597600                    --------->TOE1(1)                   <---------LBD16      --------->ANAC46                  --------->TOE1(2)   <-----------GT1                  --------->TOE2(2)  --------->ARR14(2)         --------->YAB1              <---------ARR14(2)      ---------->DOF2        --------->ICU4         --------->STY1(1)       <---------ETT(2)               <---------YAB1        <---------ATHB12--------->ARR14(2)             --------->ETT(2) --------->ATHB12 XXXXXXXXXXXXXXXXXX>MIR829.1   <---------STY1(1)  <---------MYB52(1)  <---------WOX13(1)         ---- XXXXXXXXXXXXXXX>MIR845A<---------ARR14(2) <----------DOF2 <---------MYB59          --------->YAB1   tctgataccaatgatgcaaacctcggaatccacctagggtttacgcttctcggtttgtcgacctaaagcttgaatgattcgatgaatgatggtagagatg  6597700  Previous    Next  AGI:  At2g15180.1    Description:  zinc knuckle (CCHC-type) family protein. similar to nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT3G43470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73562.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878) Range:  from: 6595825    to: 6597249    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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