Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------GLK1(2)                <---------ARR11(3)                --------->ARR14(2)                                             --------->ANAC46                --------->ARR11(3)                                             --------->ANAC58      ------->TEIL                                                             --------->ANAC58   <---------YAB1                                               --------->AHL20(2)             <----- --------->YAB1 <---------ARR14(2)                              <---------ATHB51----------->RAV1(1)<- ---ICU4 --------->ALFIN1                                       <---------AHL20(2)             <----- ---AHL20(2)  ----------->ARR10                           ----------->GT1   --------->MYB46(3)<------ ->AHL20(2)  <--------P                                <----------DOF2---------->DOF2        --------   tactcatgaatgtgggtagatactccataaatatagcattatctaaacacactgtttctttggtaaataattcaaagaaccacgacaaaaaataggtgcg  6548900                                               --------->YAB1           <---------AHL20(2)                 <---------ATHB51          --------->AHL20(2)             >>>>>>>>>RAP2.2                    <---------STY1(1)          <---------AHL20(2)           --------->ARR11(3)               <-----------------AG     --------->AHL20(2)                <---------ARR11(3)               <-----------------AGL1     <---------AHL20(2)               --------->CCA1(1)     <---------WRKY38(1) ----RAP2.6(2)                        --------->RVE1(1)     <---------WRKY12--------->STY1(1) ---------DOF2                  ----------->GT1<---------ICU4<---------DOF5.7(2)      --------->YAB1 ----DEAR3(1)             <---------------AtSPL3      --------->GLK1(2) ----------------->AGL1 <----- -TEIL<---------AHL20(2)  <---------------AtSPL8  --------->YAB1        --------->ZAT18        ------ ->ALFIN1 <---------AHL20(1)<---------SPL7    <---------AHL20(2)--------->TOE2(3)<------ZmHOX2a(1)   gcttcattttaattttttttttttttttggggtactgaaaatatctaaataatgagaatttgtcaacgtttatgtcccctagaggaaagaataattttca  6549000                 <---------AHL20(2)                                              ----------->RAV1(1)          --------------->AtSPL8                                                --------->ZAT18         ---------->DOF2                                                  --------->TOE1(2)      --------->ANAC58     --------->GLK1(1)              --------->YAB1  --------->TOE2(2)      --------->ANAC58     <---------GLK1(1)             <-------TEIL     --------->TOE2(3)         -    ---------->DOF2     <---------YAB1               <---------AHL20(2)   --------->TOE1(3)         < ----HSFB2a(2) <---------ANAC55(2)                  --------->YAB1 --------->ANAC58                 < --->HSFB2a(2) --------->ANAC55(2)                 <---------YAB1  --------->ANAC58 ---------->DOF2 <   gaacccaaaagcaaagtacttaatttctgatttctcttgagtacttgagtactataatattcatagaacaagaaaacctaagcccacaaagtatatgtag  6549100                                                  ------>ZmHOX2a(1)                                                  <----------DOF2                                              <---------ARR11(3)                                         <---------WOX13(1)                        <-----------GT1                                         <---------YAB1                       <---------RVE1(1)                                       --------->ATHB12                       <---------CCA1(1)                                      --------->ICU4                         --------->ARR11(3)                                      <---------ATHB12 <---------HSFB2a(2)   <---------ARR11(3) -------->ANAC55(2)              --------->MYB52(1)    --------->HSFB2a(2)  <------ZmHOX2a(1) ---------ANAC55(1)          <---------ICU4   <-----------GT1      --------->GLK1(2)          <------ ---------ANAC55(2)         --------->ICU4    --------->ARR11(3)<---------TOE2(3) <<<<<<<<<<GT-3b ---------ANAC46       ----------->GT1<---------YAB1   <---------LBD16  <<<<<<<<<MYB98        -------   ttaagtgtttgaattcaagtttcaagtgtaataagtaccgatgattaatatccttttctcggatttaagaatttgttaggatatttttcttcacttctga  6549200                                        --------->YAB1                                        --------->ATHB51                                        -------->ATHB1                                        <---------ICU4                                        <--------HAHB4             --------->AHL20(2)                                       <---------ATHB51            <---------ICU4                                       <---------YAB1             <---------YAB1                             <---------ARR11(3)                 <--------HAHB4                             <-----------ARR10                  --------->ATHB51                             --------->AHL20(1)                 <---------ICU4            --------->AHL20(1)         --------->ICU4 <------NtERF2<---------AHL20(2)       <---------AHL20(2)    --------->ARR11(3)      --------->LBD16      <---------MYB52(1)       --------->AHL20(2)   --------->CCA1(1)      <---------LBD16--------->ICU4   --------->ZAT6      --------->AHL20(2)    --------->RVE1(1)<-----------GT1    --------->YAB1     <-----------GT1      --------->YAB1    --------->AHL20(2)<---------YAB1       --------->AHL20(2) <---------YAB1 ---HSFB2a(2)        ----------->GT1   <---------ATHB12        --------->ICU4<------MYB46(1) -->HSFB2a(2)     ---------->DOF2    --------->WOX13(1)      --------->YAB1  <------MYB83       <----   aaaaacaattaaaatatactaaaagataaaatatcttggcaattattatacaacgcggagaaagaataattaatacgtttggttatcactctcttgattc  6549300                                                  --------->AHL20(2)                                                --------------->AGL15                                                <---------------AGL15                                      <---------ANAC55(2)                          <<<<<<<ZML2 --------->ANAC58                     --------->ZAT2   --------->ANAC58                     <---------ZAT2  <---------LBD16                     <---------STY1(2)*TSS     <-----------------AGL3      ---------->DOF2     <XXXXXXXXXXXXXXXXXXXXMIR778  <-----------HVH21              ----------->GT1            ---------   ----------->TBP   <---------At4g35610  --------->ANAC58   ---------->DOF2 --------->ANAC58 -------GT1          --------->At4g35610  --------->ANAC58  --------->TOE1(2)--------->ANAC58  ------   actctatatatgtaaaccgagccagctagaacgaagtgtcacggacacaacttaaaatagaaccaaagagtaaacacttaagcaaaacaattttgtccta  6549400                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                     --------->ARR11(3)                                                                                     <---------ARR11(3)                                                            <---------AHL20(2)       <---------ARR14(2)                                                  <----------DOF2                    <---------AGP1                                                ------>ZmHOX2a(1)                    --------->ARR14(2)                                              ==============================HOX2a_HOX2a     ---------                                              ------>ZmHOX2a(2)                     ================HOX2a_HOX2a                                             <------ZmHOX2a(2)                      =================                                             ===============================HOX2a_HOX2a------>ZmHOX2a(2)                                            <---------ARR14(3)                      =================                                            --------->ARR11(3)                      <------ZmHOX2a(1)  <---------TOE1(2)                         <---------GLK1(2)                   ---------->DOF2  <---------TOE2(2)                         <---------ARR11(3)       <------ZmHOX2a(1)<------ZmHOX2a(2)  <---------TOE1(3)      ---------->DOF2    --------->ARR14(2)       ===============================HOX2a_HOX2a  <---------TOE2(3) --------->ARR11(3)      --------->AGP1<----------DOF2     --------->AtLEC2 ->ID1              <---------ARR11(3)      <---------ARR14(2)       ========================HOX2a_HOX2a >ZmHOX2a(1)   <---------ATHB12             --------->ARR14(3)       =========================HOX2a_HOX2a   ctcttaggttatctccaatgaagaacttaaagatggttttcttcaagatcctctttatctctttaatggcaggattagccatgaaaggatctaagatcaa  6549500                --------->ARR11(3)       ------>ZmHOX2a(2)      <------ZmHOX2a(2)      --------->GLK1(1)      <---------GLK1(1)     <---------ARR14(3)                                                                     ------>ZmHOX2a(1)     --------->ARR11(3)                                                                   ------>ZmHOX2a(2)     <---------ARR11(3)                                                                  <------ZmHOX2a(2)     <---------AGP1   --------->ANAC46    --------->MYB46(3)                            <---------ARR14(2)     --------->ARR14(2)                --------->MYB46(3)                          <---------ANAC58     --------->ARR14(3)        <---------REM1(2)                                   <---------ANAC46     <---------ARR14(2)     --------->AtMYB61          --------->ANAC58            <---------ANAC58 -ARR11(3)      <---------ARR11(3)--------->ANAC46     --------->ANAC58   ---------->ID1--------->ARR14(2) >ARR11(3)  ---------->DOF2--------->ANAC46------->GAMYB              <---------ANAC46  --------->ARR11(3) ============HOX2a_HOX2a  ----------->RAV1(1)   --------->ANAC46      <---------ANAC58  <---------ARR11(3) =============HOX2a_HOX2a<---------ALFIN1-------->P--------->TOE1(3)  <---------ANAC58----------->ARR10   cgtagaagatctccaaaagttctccctccaccatacacagaacaacctccaaaccataagccttctattgtttcttgtcgtttttgtgtggatcctctac  6549600                                                                                                   <-                                                                                            ---------                                                                                            ---------                                               ------>MYB83                                 ---------                                               ------>MYB46(1)                              <--------                                        <---------At4g35610                     --------->TOE2(3)  <-                        --------------------->WRI1   <-----------HVH21          --------->TOE1(3)  <-                    --------->WRKY12   ------>ZmHOX2a(1)                       ----------------->AGL1          --------->AtMYB61        <-----------GT1  --------->DEAR3(1)  <---------ARR14(2)  ---------          <---------MYB59       <---------GLK1(1)<---------ALFIN1       --------->ARR14(2)  ---------  <-----------GT1  <---------MYB52(1)----------->RAV1(2)   --------->At4g35610 <-----------------AGL1   atgttaacccgacctaaacccgtttaccttgttgatttctcctgctaccttccaccgtcgcatctcaaggtcagtatccaaaccctaatgggacacgcaa  6549700                                                                             --------->HSFB2a(1)                                                                    <---------ARR11(3)                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                    <---------GLK1(2)                                                                   <---------HSFB2a(1)                                                                   <---------HSFC1(2)                                                                   --------->HSFC1(2)                                                                   --------->HSFB2a(1)                                                                  ----------->ARR10 --------ANAC58                                               <------ZmHOX2a(1) >ANAC55(1)         <-----------RAV1(1)                      --------->LBD16 <---------HSFB2a(1) >ANAC58            --------->ALFIN1                        --------->LBD16  <---------KAN4(1) >ANAC58           <-------MYC3                            --------->HSFB2a(2)     --------->LBD16 -ANAC55(2)        ------->MYC2                            <---------LBD16  ------->TEIL      ------- --------ANAC46    <-------MYC2                            <---------HSFB2a(2)   <-----------------AGL1 --------ANAC58    ------->MYC3                            <-----------RAV1(2)--------->KAN4(2) >ANAC46      --------->ANAC58                      --------->WRKY12--------->ARR11(3)        ------- >ANAC55(2)   --------->ANAC58  ---------->DOF2   <---------At4g35610--------->GLK1(2)     --------->WRKY18(1)   gacgtgcaagagaagcaggcatgtgttggaagaacaaagagagcgaccatttagttgacttccaggagaagattcttgaacgttccggtcttggtcaaga  6549800  Previous    Next  AGI:  At2g15090.1    Description:  fatty acid elongase, putative. Identical to 3-ketoacyl-CoA synthase 8 (KCS8) [Arabidopsis Thaliana] (GB:Q4V3C9;GB:Q9ZUK2); similar to fatty acid elongase, putative [Arabidopsis thaliana] (TAIR:AT4G34250.1); similar to 3-ketoacyl-CoA synthase [Eranthis hyemalis] (GB:ABS18382.1); contains InterPro domain Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392); contains InterPro domain Thiolase-like; (InterPro:IPR016039); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328); contains InterPro domain FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601); contains InterPro domain Thiolase-l Range:  from: 6549338    to: 6551029    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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