Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->MYB52(1)                            ------>MYB83       ------>MYB46(1) --------->DOF2             ------>MYB46(1)    ------>MYB83 -------HSFB2a(2)           <-----------HVH21<---------MYB59                    ---------->DOF2 ->HSFB2a(1)       --------->TOE1(3)         --------->MYB46(3)       --------->ATHB12 --HSFB2a(1)      ----------->RAV1(2)       --------->ANAC46         <---------YAB1             <---- -TOE2(3)        ------->TEIL   --------->At4g35610               <----------DOF2               -----   cccaaagtgactcaatatgaacctgaaacctatcagatggaagaagacccaacatgcctgagattgttcttttcattgcatccaaagtagtaactggaac  6415800                                                                                --------->YAB1                                                      ==========================HOX2a_HOX2a                                                      <------ZmHOX2a(1)       --------->GLK1(2)                                                  ---------->DOF2         --------->HSFB2a(2)                                              <------ZmHOX2a(2)      ----------->HVH21 ------>ZmHOX2a(1)                            ===============HOX2a_HOX2a ------>ZmHOX2a(2) -----HSFB2a(1)                              --------->ARR11(3)    --------->ANAC55(2) ---->HSFB2a(1)                              <---------ARR11(3)   <---------TOE2(3)       -----------   atccttctgaatcaaactcacatctaatggctcaatctcttgtataagatcagaaaggacacattttttaggtgatcgagaatcagaatggagagtgaaa  6415900                      ----------->RAV1(1)                   --------->ANAC46                                <---------ZAT6                --------->YAB1                               >>>>>>>>>TBF1                <---------ICU4                         --------->HSFB2a(2)          --------->ANAC58    <---------YAB1           <---------HSFB2a(2)           <---------ARR11(3) >GT1     --------->ANAC58  <---------ICU4           <---------REM1(1)              <---------GLK1(1)   tcgtcaagagagaagccatcatcgccacaattactactgaaattgtttgaagaagttgtagaagaagaagtgatagtgagacttcgaaatctccgattga  6416000                                                                                                 <---                                                                                                 <---                                                                                               ------                                                                                           <---------                                                                                           ----------                                                                                          <------NtERF2                                                                                         ------>NtERF2                                                                                        --------->ETT(2)                 ---------->DOF2                            ---------->DOF2            ---------->ID1                <------ZmHOX2a(1)    <----------DOF2  <------ZmHOX2a(1)           <---------MYB46(3)   <------ZmHOX2a(1)         <----------DOF2        <---------TOE2(3)      ---------->DOF2-----------   atcgaggaagaaggaagaggaaaggaagaggctttgtgggtttatggagaagttgaggaagagaaagagagaaggaagaaagagtcgttgtcgccattaa  6416100                             <---------HSFC1(2)                             --------->HSFC1(2)                             <---------HSFB2a(1)                    --------------->AtSPL8                    <---------------AtSPL3                    <---------------AtSPL8                                                    <------       <----------DOF2      ------->TEIL                                                      ------- ------TOE2(3)    <---------ARR14(2)                                                          ------- ------TOE1(3)    --------->ARR14(2)                                              <-----------GT1 ---->DOF2       <------NtERF2               <----------DOF2                  <---------ARR11(3) ------AGL15    --------->LBD16         <<<<<<<<<TBF1                         --------->ARR11(3) ----->AGL15   <---------ANAC46<-----------GT1                      <---------MYB52(2)  <----------DOF2 ------>AGL3  <---------LBD16--------->HSFB2a(1)       ------>ZmHOX2a(1)      <---------GLK1(2)   aggttgaagctttaatggcggaattgtacgaattttctcttcttcttctttctcttcctcttagtctcaaacaaaccctagatttttcttcttttgtgct  6416200                              --------->ANAC55(2)                              ============================================MYC_MYB                              <---------ANAC55(2)                            <---------ARR14(2)                         --------->HSFB2a(2)                           --------->ANAC58                         <---------HSFB2a(2)                           --------->ANAC58                         --------->ANAC55(2)                           --------->ANAC46                         --------->ANAC46                            <---------ALFIN1                      --------->GLK1(2)                            XXXXXXXXXXXXXXXXXXXX>MIR867             --------->RAP2.6(2)  *TSS                            ------->GAMYB             ----------->RAV1(1)----------->HVH21                --------->MYB46(3)           <---------At4g35610--------->TGA1a                    <---------MYB52(2)       <-----------TGA1  <---------ANAC55(2)                   <---------DOF5.7(2)       <-----------HVH21<---------LBD16                       <---------WRKY12 <----------DOF2      <---------ARR14(2)                      <---------WRKY38(1)          <---------MYB52(1) =======================================bZIP_DOF              <---------WRKY45       --------->WRKY38(1) ---ZAT14  --------->At4g35610----------->GT1                --------->DOF5.7(2)     ----------->HVH21 -->ZAT14 --------->ANAC58  --------->ARR14(2)              <-----------HVH21     <---------ZAT6  <-- -->ZAT18 --------->ANAC58--------->LBD16                   --------->TOE2(3) <---------YAB1  <------   ctgttttatcgtcagccacaaaacaatccggaacgtgacaaaaacgatgaatacaacaacatcgtcaacgaacacggcttattagtggtgaccggttatt  6416300      --------->SPL7    <---------SPL7   <---------DEAR3(2)                         --------->WOX13(1)   <------MYB83                              <---------WRKY38(1)      <---------AHL20(2)   <------MYB46(1)                          --------->WRKY18(1)      --------->AHL20(2)  --------->MYB111(1)                     <---------MYB46(3)     <---------AHL20(1)  <---------DEAR3(1)                   <---------ANAC46          --------->AHL20(1)  --------->MYB46(2)                 <-------TEIL                --------->AHL20(2)  --------------->AtSPL3             --------->ZAT14             <---------AHL20(2)  --------->MYB59                    <---------ZAT14            --------->AHL20(2)  <---------MYB46(3)            <---------LBD16    <----------DOF2<---------AHL20(2) <---------ORA47(1)           --------->ARR14(2)   ------>ZmHOX2a(1) <---------AHL20(1)         <---- -------AtMYB61    ----------->GT1  <-----------HVH21    <---------AtLEC2    <-----------GT1   ------ ------CBF  <---------LBD16   <---------ARR14(2)  --------->TOE2(3)  <---------AHL20(2)       -------   gtggtcggtacgagcccggttttgtaattccatgtccggttcagtggtcaatcctttgtgcatgaaattaatttttttttaacaaaactggatagcaacc  6416400                                                                                                  <xx                                                                                                 <xxx                                                                                                 <---                                                                                                <----                                                                                               <xxxxx                        <-----------GT1                                                        ------                   <---------ARR11(3)                                   <---------AHL20(2)    -------                   --------->ARR11(3)                                   <---------AHL20(1)    <xxxxxx                 <---------TOE1(3)                                      --------->AHL20(2)    <xxxxxx -----ALFIN1<----------DOF2                                       <----------DOF2            <xxxxxxx --->MYB46(3)    <---------TOE2(3)                 --------->ICU4 --------->TOE2(3)      --------->MYB52(2) ->P <----------DOF2   <-----------GT1        --------->YAB1      --------->TOE1(3)  --------->ICU4<x   acttcggctttaaacttttaagattttaactcttacaaaaaaaaacaatcgaaatgatcaatttgcaactttaaaaaatttaaggccatgtttgtttcat  6416500                                   --------->AHL20(2)                                --------->ATHB12                           --------->AHL20(2)                    --------->WOX13(1)                   <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(s2) <---------WOX13(1) ------ICU4        --------->AHL20(2) -----YAB1  --------->AtLEC2    ----------->GT1 xxxxxxxxxxxxxxxxxxsmallRNA(se3)-------->HAHB4              <---------YAB1 --------->AGL15  --------->AHL20(2)                       --------->ARR11(3)    <---------ICU4 -->YAB1 <---------YAB1--------->YAB1      <---------WOX13(1)                    --------->ATHB12<--- xxxxxxxxxxxxxxxxsmallRNA(le3) <---------ATHB12            <---------ARR11(3)   <---------YAB1   ---- xxxxxxxxxxxxxxxxxsmallRNA(s2) --------->ICU4             --------->YAB1 --------->MYB52(2) --------- xxxxxxxxxxxxxsmallRNA(le3)<---------AHL20(2)     ------->TEIL       <---------ZAT6        --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------AHL20(2)  <---------WOX13(1)    --------->YAB1<--------   catttagcattttcattcaaattaatcatataaatgattaatttgaatgatgcatttgaatgatatttgtagtgtttgtttcatcatttgatatttaatt  6416600      <---------ANAC58     --------------->AtSPL8      <---------ANAC46     <---------------AtSPL3                                                 ---      <---------ANAC58     <---------------AtSPL8                               <---------ARR11(3)--- <---------ATHB12        --------->YAB1                                       <---------YAB1  xxxxxxx ------AHL20(2)         <---------YAB1                                <------NtERF2   <---------TOE1(3) ----->AHL20(2)  <------ZmHOX2a(1)                                   --------->LBD16  <---------TOE2(3) >AHL20(2)      ----------->GT1                    <---------YAB1   <---------ANAC46 <---------At5g28300 -AHL20(2)     ----------->GT1 <-----------------AGL1              <---------LBD16  <-----------GT1<-   taaatgatgcgtttgaataggaaaatatgatagtacgattttggcaaaaaaacatgattttgaagttttggcggaaaaacatgattttacggtttttggc  6416700  Previous    Next  AGI:  At2g14910.1    Description:  similar to amine oxidase/ copper ion binding / quinone binding [Arabidopsis thaliana] (TAIR:AT5G14970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70864.1) Range:  from: 6413558    to: 6416234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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