Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------YAB1                                                                         --------->ICU4                                                                       --------->YAB1                                                                      ===============================                                                                      ----------------->AGL1                                                                      ----------------->AGL2                                                                      <-----------------AGL2                                                                      ----------------->AGL3                                                                      <-----------------AGL3                                                                      <-----------------AGL1                                                                      <-----------------AG                                                                      ===============================                                                                     -------->P   --------->DAG2   <-                                                                  <---------At4g35610   --------->HSFC1(2)                                                            --------->ICU4       ---------->DOF2   --                                                       ----------->GT1----------------->AG         --                                                       <---------ANAC55(2)--------->ATHB12         <-          <---------YAB1                               --------->ANAC46--------->TOE2(3)<---------HSFB2a(1)       <---------AHL20(2)                              --------->ANAC58--------------->AGL15 <-------      --------->AHL20(2)          ----------->GT1      --------->ANAC58<---------------AGL15 <------- -------->ANAC58                 --------------->AtSPL8--------->ANAC55(2)--------->ATHB51   <------- -------->ANAC46              ---------->DOF2     ---------->DOF2 --------->At4g35610   <---------HSFC1(2) -------->ANAC58   ------->TEIL  <---------------AtSPL8--------->ANAC55(1)<---------ICU4--------->HSFB2a(1)   ttaagccattttatatttgtgaatctcatagctaaagagtacaaatttcacaaaaagacgtaatttttagctaccataattggaaaaggaaactcctttt  6396300                                                    --------->AHL20(2)                                                  ----------->GT1                                              <------NtERF2                                             ------>NtERF2                                            --------->ATERF1(2)                                            <---------ATERF1(2)                                           --------->At4g35610      --------->ANAC58                     --------->ATERF1(1)      --------->ANAC58                     <---------At4g35610    ---------->DOF2                        <---------LBD16 ========MADS_MADS                         <------NtERF2 ==============MADS_MADS                  <---------ATERF1(1) --------HSFB2a(2)                        <---------RAP2.3(1) ------->HSFB2a(2)                        <---------ORA47(2) ------------->AGL15                     <---------DEAR3(1)                    <-----------HVH21 --------------AGL15                     <---------DREB2C(2)              <----------DOF2 --DAG2                                  <---------RAP2.3(3)              <---------DAG2 <---------ANAC46 ---DOF2                   --------->TOE1(2)<---------DEAR3(1)      ----------->HVH21<---------ZAT2 --------AGL15            ----------->RAV1(2)--------->RAP2.6(2)<------ZmHOX2a(1)    --------->ZAT2<-   tccagtaaaagccaattgctaagttagtacctgagaagacaagtcggcggcaatgtaaataagagaggaagtgacacttttggtcacaactgggtgtgat  6396400                          --------->ANAC58                          --------->ANAC58                         ------->TEIL                       ------->GAMYB                      <---------MYB55(2)                                                            <                      --------->MYB46(3)                                                            =                      <---------MYB52(2)                                                          ===                    --------->MYB52(1)                                                            ===                  <---------MYB55(2)                                                              <--                  --------->MYB46(3)      --------->At4g35610             --------->DAG2          ---                 ------>MYB83      ----------->HVH21                  <------ZmHOX2a(1)           <--            <-----------GT1   --------->ARR14(2)          --------->GLK1(1)                 <--------           <---------ARR11(3) <---------ARR14(2) >>>>>>>>>TBF1 ---------->DOF2              ========= ----------GT1   ------>MYB46(1)  ------>ZmHOX2a(1) <---------------------WRI1        ------>ZmHOX2a(1)   ttaaccataccaagataccatccaacgaacccaatcctcgacggagatgaagaagaagagaaacccaaagaaggagaaggtgagactcctgtttcttttg  6396500                                                                                --------->LBD16                                                                                <------NtERF2                                                                                ------>NtERF2                                                                               --------->DEAR3(1)                                                                              --------->ATERF1(1)                                                                              --------->RAP2.3(1)                     --------->LBD16                                          --------->DEAR4(2)              <---------O2                                                    <------NtERF2              --------->TGA1a                                                <---------RAP2.3(1)              --------->ANAC55(2)                                            --------->ABI4(1)              <---------TGA1a                                                ------>NtERF2              --------->bZIP60(1)                                            <---------ATERF1(1)              <---------ANAC55(1)                                           --------->ANAC46              <---------bZIP60(2)                                           --------->DEAR3(1)              <---------bZIP60(1)                                           --------->RAP2.3(2)              <---------ANAC55(2)                                           <---------DEAR3(1)              <---------ANAC46                                             --------->ATERF1(1)              <---------ANAC58                                             --------->DEAR4(2)              --------->O2                                                 --------->RAP2.6(1)              <---------ANAC58                                             --------->ERF1            <---------TGA2(2)                                              <------NtERF2           ----------->TGA1                                                --------->RRTF1(1)           ----------->HVH21                                               --------->ORA47(2)         --------->At4g35610                                               --------->RAP2.3(1)         --------->ZAT2                                                   <---------RRTF1(1)         <---------At4g35610                                              ------>NtERF2    <---------HSFB2a(2)                                                   <---------RAP2.3(1)    --------->HSFC1(1)                                                    <---------ATERF1(1)    <---------HSFC1(1)                                                   --------->ANAC46    --------->HSFB2a(2)       --------->ARR11(3)                         --------->bZIP60(1) ----------DOF2 ----------->HVH21                                     ----------->HVH21 =======================bZIP_DOF                                    --------->At4g35610   <---------SPL7 =========================================================================MADS_MADS --------->SPL7--- =======================bZIP_DOF                        ============================================= -------------AGL15  ----------->GT1                    ----------------->AG--------->RAP2.3(3) ----- ------------>AGL15<---------LBD16             <---------LBD16      <-------GAMYB  --------->ARR14(2) --------DOF2----------->STF1 <---------ARR11(3) --------->LBD16    <---------At4g35610  <---------ANAC46 --DOF2 --------->GLK1(2)   --------->MYB59 <---------GLK1(1)      <---------MYB46(3)  ------>NtERF2 =======================bZIP_DOF   --------->ATHB12   <-----------GT1 --------->WRKY12 --------->LBD16   ctctttcgagaagctgacgtgaccggaaataaggtctcgattgagcaactccggtcttaccatattggtctgttgacgccgccgcgttccgccgtatgag  6396600            ------>NtERF2            <---------ATERF1(1)                     --------->LBD16           <---------DEAR3(1)                  <---------ANAC58          --------->ATERF1(1)                  <---------ANAC58        <---------ETT(2)                  <---------ICU4        --------->ETT(2)                 --------->ICU4            <-------GAMYB                    -       <------NtERF2                  --------------->AGL15       <---------MYB46(3)               <-      <-----------HVH21               <---------------AGL15       --------->MYB111(2)              --     --------->ALFIN1               --------->At4g35610           --------->MYB55(2)          <------  <---------DEAR3(1)                <---------At4g35610--------->ARR11(3)                ---------->DOF2 ------>DEAR3(1)       --------->LBD16=============================================================== =====================================================MADS_MADS  <--------P           --------->YAB1< ---->At4g35610        ------>ZmHOX2a(1) <---------YAB1<---------ARR11(3)       <---------TOE1(3)----   ccgagcggtgtcgacggctacgttcctgaacaatgctctgctcattatggcttccgagattttaggggttgttgttgttgttcaggtatcagaaagcttt  6396700                             <---------------AGL15                             --------------->AGL15                            ----------------->AGL1                            ----------------->AGL3                            ------------>CBF                            ----------------->AGL2                            ----------------->AG            --------->AHL20(2)                                                                  -----    --------->RAP2.6(3)    <-----------GT1                                                  ---------  <---------YAB1          <-----------GT1                                                   --------- -------->YAB1        <---------GLK1(2)                           ----------->TBP         <---------LBD16 --------YAB1         <---------ARR11(3)                     --------------->AtSPL8     --------->ARR14(2) ------->ICU4         --------->ARR11(3)               --------->At4g35610              <---------ARR14(2) ----DOF2 *TSS     <---------WOX13(1)            <------MYB46(1) <-------TEIL           --------->ARR11(3) =============================================MADS_MADS<---------At4g35610             --------->CCA1(1) ---------ICU4<------------CBF                   <---------DEAR3(2)                    <---------GLK1(1) ----->YAB1 <---------AHL20(2)                   <------MYB83--------------->AtSPL3    --------->RVE1(1)   gatgatgactgcaaaaaattgatagatttttccaatttaagtagtttcagtcggtttagctaaaccgtacatataccgagttacccaaaatatccggtat  6396800                                                                                          <----------DOF2                                                                                       <------MYB46(1)                                                                                       <------MYB83                                                                                    <---------MYB52(1)                                                                                   <---------SPL7                                                <---------TOE1(3)                 <---------ANAC46                                                --------->MYB59              <------MYB46(1)                                                <---------TOE2(3)            <------MYB83<---------MYB52(1)                                            <----------DOF2   <---------GLK1(2)--------->ARR14(2)                    <----------DOF2    --------->ALFIN1       --------->ARR14(2)  <---------ANAC58 ------>TBP         <---------DAG2   <---------ANAC58         <---------ARR14(2)  <---------ANAC58 -->GT1          <---------ALFIN1    <---------ANAC46     <---------LBD16   --------->MYB59 >LBD16         --------->MYB46(3)   <---------ANAC58    xxxxxxxxxxxxxxxx>smallRNA(i)--------->SPL7   aaatggccaaaaaactcaaccactttatggaattagttggggtgggcatttaggtttaacttcggattcggtttgagtttggttccgttcggttttttgg  6396900                                                                                    <------MYB46(1)                                                                                    <------MYB83                         ------->GAMYB                                             <---------AtMYB61                      --------->MYB52(1)                                           --------->MYB59                 ------>MYB83                                                    <---------MYB52(1)               <---------MYB59                      <------MYB83               <------MYB83              --------->MYB46(3)                    <------MYB46(1)            <------MYB46(1)            <-----------GT1---------->DOF2         <---------AtMYB61--------->WOX13(1) ----------->GT1 ------>MYB46(1)                   --------->MYB59--------->WRKY18(1)     <----------   gttttgtaaaattctaaccaaactcaaccgaaagtagttgaagttagtatggtttggtttgggtttgggtcaatctatgttcggtttggtttgtttttag  6397000                    <---------HSFB2a(2)                    --------->HSFB2a(2)                    <---------YAB1                 --------->ARR14(2)                 <---------ARR14(2)                            --------->ATHB51              --------->MYB59                                  <---------ICU4         <---------AHL20(2)                                    --------->ATHB12         <---------YAB1                                       <---------YAB1        --------->AHL20(2)            --------->MYB52(1)      --------->ICU4                        -        <---------AHL20(2)     <---------ATHB12         <---------ANAC58               --------->YAB1 --------------ANAC81 ---------->DOF2 <-----------GT1   <---------ANAC58 ------->TEIL <---------YAB1-   ttcgtttgattttaattcggttctgaaagacgaatcaatataacgaaacaaaactatttcgttcattattgtttgaacgttgaatttgatcatagttaag  6397100                                                                                           -------->P                                                                                        <---------MYB52(2)                                                                                        <---------MYB111(1)                                                                                   ----------->GT1                                                                                   --------->ANAC55(2)                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                   <---------ANAC55(2)                                                                                  <---------TOE2(3)                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                     <---------------AtSPL8<----------DOF2--------->MYB52(1)                                              ----------->GT1      --------->AHL20(2)   <---------MYB59                                            --------->MYB52(1)    --------->AHL20(2)    <---------MYB46(2)  <----------ID1                        --------------->AGL15   --------->TOE2(3) --------->MYB46(2) -------->ANAC58                        <---------------AGL15   --------->TOE1(3) --------->MYB59 -------->ANAC58                   <--------ATHB1    --------------->AtSPL8--------->TOE2(3)---------   ttaagcaacaagttcaagttgcaaaatttaagttgaataattcaaataagggaaatttgtacataacattaaaaaaactttaattaggtaactaaccaaa  6397200  Previous    Next  AGI:  At2g14860.1    Description:  peroxisomal membrane protein 22 kDa, putative. similar to peroxisomal membrane protein 22 kDa, putative [Arabidopsis thaliana] (TAIR:AT4G33905.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63954.1); contains InterPro domain Mpv17/PMP22; (InterPro:IPR007248) Range:  from: 6394706    to: 6396710    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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