Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          --------->ARR11(3)                          --------->ARR14(3)                          <---------ARR14(3)                          --------->ARR14(2) --------->RAP2.6(3)      <---------ARR14(2) ---------ARR14(2)        <---------ARR11(3) -------->ARR14(2)       --------->GLK1(1) ----->AtMYB61           <---------GLK1(1)                                                         -- >GAMYB                <------ZmHOX2a(1)                                                           <- ->MYB46(3)          <---------TOE1(2)                                   --------->TOE2(3)    <------ --MYB55(2)          <---------TOE2(2)          <-----------GT1 <---------MYB52(1)           -------- --GT1             --------->TOE1(2) --------->MYB52(1)<-----------HVH21 <----------DOF2  --------->YAB1   catatcggctattaatctgttcgtaggagatctttcgactaactggaattttacatatgtcaaaccgttttctaactttagtctcaaaactctcataaaa  6392600         <---------AHL20(2)         --------->AHL20(2)        <---------AHL20(2)     --------->AHL20(2)     <---------AHL20(2) ------->AHL20(2) --------AHL20(2)                      <---------------AtSPL3                 --------->AHL20(2) ---AHL20(2)         <----------DOF2   <---------------AtSPL8              <----------DOF2 ->AHL20(2)  <---------AHL20(2)        --------------->AtSPL8      <----------DOF2   ------>ZmHOX2a(1)   tttatatttatttatttagttatctttttttatggcattggagagtacctctctatattttgttttaaactttgagacttttaaatcctactctttgtaa  6392700                                                                                             --------                                                                                            ------->PIF5                                                                                            <-------MYC2                                                                                            <-------PIF4                                                                                            <-------PIF5                                                                                            <-------MYC4                                                                                            ------->MYC4                                                                                            ------->MYC2                                                                                            ------->MYC3                                                                                            ------->PIF4                                                                                           <---------TGA1a                                                                                           ==========                                                                             --------->AHL20(2)  ----                                                                        --------->AHL20(2) ==========                                                ---------->DOF2         --------->AHL20(1) <---------O2                                            ------------------------>ANAC81 --------->AHL20(2) ------                                         --------->ARR11(3)        >>>>>>>>>>GT-3b         --------->TGA1a                                       <---------TOE2(3)        --------->ANAC58          <---------TOE1(2)                                    --------->AHL20(2)          ----------->GT1          <-----------                                --------->AHL20(2)              --------->ANAC58 --------->AHL20(2)                                <---------AHL20(2)           ------------------------>ANAC81<-------MYC3     <---------At4g35610       <---------AHL20(2)           ------------------------>ANAC81--------->O2  <-------TEIL                 --------->AHL20(2)      ----------->GT1  <---------AHL20(2)-----------   tacattcatctaattttaaaaacatatttttaaaaaaatttaagaaattgaaaagaactgaaaaacaagaaaaataaaataaaaaaaattcgcacgtgtg  6392800                            <---------DOF5.7(2)                                   --------->ANAC58                            --------->MYB52(1)               <------MYB46(1)      --------->ANAC58 ->ALFIN1                 --------->DOF5.7(2)                <------MYB83      --------->TOE1(2) ========================MYC_MYB                            --------->MYB59    <---------SPL7 ------->HVH21      ---------->DOF2              <---------WRKY12             --------->ANAC58 ==============================bZIP_DOF          <---------WRKY38(1)          --------->ANAC58 --->ALFIN1      ------->GAMYB                 --------->LBD16               <---------TOE1(2)     -- -OsbHLH66    --------->MYB52(1)               <-----------HVH21    ------------>CBF      --------->ANAC46 ->OsbHLH66 <---------MYB52(2)   ----------->GT1<---------MYB52(1) --------->YAB1--------->SPL7    --   tgactgtccgaactactaacggaaaagagttaacgaggtttatttcttccgtcaactcttgtttggtcatcacaattcgcacgtacgaaaacacaaaaca  6392900                                                      *TSS                                                   --------->ANAC58                                                   --------->ANAC58                                                --------->ZAT18                                                <---------ZAT18                                              <---------------AtSPL8                        ----------->GT1   <----------DOF2---------->DOF2                        <----------ID1  <---------------AGL15          <---------------------WRI1    --------------->AGL15                        <<<<<<<<<TBF1        <----------DOF2----------->GT1  ============================================================= ------->ANAC58       --------->DAG2   <-----------------AGL1   ----------->GT1   <<<<<<<<<TBF1 ----- ------->ANAC58      ---------->DOF2   <-----------------AGL2<----------ID1    <<<<<<<<<TBF1---------   caagcgaacactttcgataaacaaaaaggaaaaacaaaaaatccctttagggcacaaaacaaagcgaagaaaaaacacttcttcttcttcttcaacaaca  6393000                                                 <-----------GT1                                              ------->TEIL                                           <---------ANAC55(2)                                           --------->ANAC55(2)                                           --------->ANAC58                                           <---------ANAC58                                           --------->ANAC58                                           <---------ANAC58                       --------->WOX13(1) <-------TEIL                     <---------ATHB12     --------------->AtSPL8             <---------RAP2.6(2)          --------->SPL7                                        <----            <---------LBD16               --------------->AtSPL3                     <----------DOF2           <---------ANAC58           <---------------AtSPL3                     <-----------GT1<---- ===============================================MADS_MADS                        <<<<<<<<<GT-1  <---- ------>RAV1(1)<------NtERF2    <---------------AGL15              ------>ZmHOX2a(1)<---------DAG2 >MYB46(3) <---------ANAC58    <-----------------AGL3             --------->TOE2(3)----------------->AGL1   acaaaacccaatttcgcggctaaatcaatcgcttcttctactggtacgtacttactctcttaattcatccttcaatcttcgatttacctttctgggtttc  6393100                                                                               <---------CCA1(2)                                                                        =============================                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                       --------->GLK1(1)                                                                       ==============================                                                                      <---------ARR11(1)                                                                      <-----------ARR10                                                                      <---------ARR14(2)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                      --------->ARR14(2)                                                                     <---------ARR14(1)       --------->ANAC58                                            --------->TOE1(1)       --------->ANAC58                                            --------->TOE2(1)    ------>ZmHOX2a(1)                                             <---------LBD16   --------->TOE2(3)      <-----------GT1                        --------->TOE2(2) -----ANAC58         --------->ATHB12                <-----------GT1 <---------CCA1(2)            --- -----ANAC46       <---------WOX13(1)     --------->DAG2         --------->TOE1(2)                <-- -----ANAC58    <---------YAB1           ---------->DOF2<----------DOF2--------->HSFB2a(1)        ---   gttttcctcaagtcaatttcgattgatttcactgtttcttcgataaagcttcttaatactttataaacctcggatcttctcaaatctctcttccttcttc  6393200                                     --------->HSFB2a(2)                              ------>MYB83  <---------AHL20(2)                            --------->DEAR3(1)                                                    --- <---------GLK1(2)          --------->DREB2C(2)                                                   <-- ====HOX2a_HOX2a            --------->MYB46(3)                                                    --- ====HOX2a_HOX2a           --------->DEAR3(2)  <---------YAB1                                     <-- --->ZmHOX2a(1)<-----------GT1------>MYB46(1) <---------TOE2(3)     <---------MYB52(1)  ------->TEIL< -------HSFB2a(2)  <---------GLK1(2) <---------HSFB2a(2)    <----------DOF2             <---------ARR14(2) ------>HSFB2a(2)<---------YAB1   <----------DOF2        <-----------GT1                --------->ARR14(2)   ctagaatttgtccgaaattacgattcttcaccgactctttcagaaatttatgtttgattttactttcttagttagtcaatttgttcaacgtatttgctct  6393300      <---------TOE1(3)     <-----------RAV1(2) ------>ZAT2     --------->TOE2(3) -------ZAT2     --------->TOE1(3)                         ------->TEIL ------>STY1(2) ----------->RAV1(2)                    <---------TOE2(3) -------STY1(2)-------->P                            <---------AHL20(2)                   --------->ARR11(3) ---------ZAT18------->TEIL<<<<<<<<<TBF1    ------>ZmHOX2a(2)   <----------DOF2         --------->MYB59   agctcgctcaggttatctacctgaacttcttcttctcttacttcgatctcaagaattaatgtatgtctttgattttgaattggggttttttaggtcttgg  6393400                                      --------->ZAT2                                      --------->At4g35610                                      <---------ZAT2                                <---------AtLEC2                            <----------DOF2                           ------>ZmHOX2a(2)                         <---------ARR14(2)                         --------->ARR14(2)                         <---------ARR11(3)                         --------->ARR11(3)                         <---------AGP1                    --------->At4g35610           <------ZmHOX2a(2)                        <---------CCA1(2)  --------->ARR14(2)                           --------->AGP1                      <---------TOE1(2)    <---------ARR14(2)----------->GT1           --------->At4g35610                --------->ARR14(2)    <---------At4g35610  <---------At4g35610         <---------At4g35610                <---------ARR14(2)   ------->TEIL        <-----------RAV1(2)       <-----------HVH21   aattgagagaagagaccagtttcgctggatctttgaatgaagctggatttggattaagttcaggtgtaaatttgttggaagatggggtcagatcaatgtt  6393500  Previous    Next  AGI:  At2g14850.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33890.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G33890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72960.1) Range:  from: 6392954    to: 6394652    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version