Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->ATHB12                                          <---------YAB1                                        ------>ZmHOX2a(2)                                      --------->ARR11(3)                                      <---------ARR11(3)                                      <---------ARR14(2)                                      --------->ARR14(2)                                      <---------AGP1                                     <---------CCA1(2)                                 <---------ANAC46                                --------->ALFIN1                                <---------AtMYB61 -------->YAB1                 <---------ZAT14                           ---------->ID1 ------ICU4                   --------->ALFIN1                    --------->ARR11(3) ---->ICU4                  <---------ANAC55(1)                   <---------ARR11(3)    <---------ZAT18 --YAB1               <---------YAB1<---------MYB46(3)  <---------ZAT18 <-----------GT1---------->ID1   tattagaatacacttacaacaagtgtgattaagtgtggtggatcttgattcgattttgtgctcttgaagacatttttcgctacggtattgtccccttcga  6365500                    --------->ANAC58                               <----------DOF2                    --------->ANAC46                               <---------DAG2                    --------->ANAC58                              <---------ANAC58              <---------MYB46(3)                                  <---------ANAC58             --------->ALFIN1                                 <---------WOX13(1)            --------->LBD16                                  <------------CBF                 -------           --------->DEAR3(1)                         <----------DOF2                   <----------DOF2           <---------ANAC46                          <---------ANAC58                  <---------DAG2      --------->ARR14(2)      <---------MYB52(1)     <---------ANAC58                --------->GLK1(2)      <---------ARR14(2)<----------DOF2   <------ZmHOX2a(1) --------->ATHB12  ---------->DOF2<------- <---------ANAC46  <---------LBD16      <---------TOE2(3)  <---------YAB1<------------CBF  --------->YAB1   atgctgtgtatcgccgtggttcacggcattttgttagtctataaggaagcattttgcttctctgattggcttttccattgaaaagagaaccttttatgat  6365600                                      ---------->DOF2                                 ---------->DOF2                      --------->AHL20(2)                      <---------AHL20(2)    <---------YAB1   --------->AHL20(2)   --------->KAN4(2) --------->AHL20(1)  <---------KAN4(1)  <---------AHL20(1)                         <---------ZAT6 <---------YAB1      <---------AHL20(2)--------->DAG2 <---------WOX13(1) -->ATHB12      ------------>CBF<------ZmHOX2a(1)    <------------CBF                              <- --YAB1<---------HSFB2a(2)---------->DOF2          <---------YAB1                            <-------   ttgattattctacaagttaacaatttaataaagaggaaagaaaagttgctaatctaattggttttagagtcagttttctctgtatttgagggttttgttt  6365700                                    ------>ZmHOX2a(2)                                    ==================HOX2a_HOX2a                                   --------->GLK1(1)                                   <---------GLK1(1)                                   <------ZmHOX2a(2)                                   ===================HOX2a_HOX2a              ------>NtERF2                                  --------->ARR11(3)                          <---------ALFIN1                                  <---------ARR14(2)                       --------->PCF2                                  <---------AGP1                        <------MYB83                                  <---------ARR11(3)                   --------->MYB59                                  --------->ARR14(2)       <-------GAMYB<------MYB46(1)   <----------DOF2               <---------CCA1(2)        --------->MYB52(2) --------->MYB46(3) ---------DOF2              <----------DOF2             <---------MYB52(1)--------->PCF5      ------- -----------------ANAC81 ---------->ID1        <------ZmHOX2a(1) ------------>CBF      --------->ARR11(3)   tctttcttttggttcttctctgtgtttgtgcttttagatctccaagggaggaagttaagttagttgtatcaatttggtccccaccctcagttcttggaac  6365800                   <---------TOE2(3)                   <---------TOE1(3)             --------------->AGL15             <---------------AGL15            <-----------------AGL2            <-----------------AG            <-----------------AGL1            ----------------->AGL3                                                     <----------DOF2            =====================================================MADS_MADS         <---------TOE2(3)         <----------DOF2                       <-----------------AG            ------>ZmHOX2a(1)     <----------DOF2             ----------->GT1                               <----------DOF2<------ -->ARR14(2)<-----------------AGL3       ----------->GT1                     ------>ZmHOX2a(2)<------   ctcttcactttctttctatttaagggaatggtttttggttatatggttagactaatttggaagaagttgagagttgtgatcctttgaggctttttttctt  6365900                ------>ZmHOX2a(2)                                           ----------->GT1         --------->ATHB12                                                  <-------TEIL      --------->ANAC46                                                    --------->ARR14(1)      --------->ANAC58                                                   <---------GLK1(2)      --------->ANAC58       <---------STY1(1)                           --------->ARR14(2)  --------->AtLEC2           ------>ZmHOX2a(1)              <---------MYB46(3) ---ANAC58      ====================HOX2a_HOX2a     --------->AtLEC2     <---------ARR14(2) ---ANAC58<------------CBF<---------YAB1         <-------TEIL          ----------->ARR10           <-   ggtcttgcaagtcattgatctaagagttatcctagggggaagaagatgaagttcatgaaaattggttcgaagctagattcgtttaaaactgatgggaaca  6366000                                                          <<<<<<<<<<MYB80              --------->ARR11(3)                         <------MYB83              <---------ARR14(2)                         <------MYB46(1)          --------->At4g35610                            <---------MYB46(3)          <---------At4g35610                           <---------AtMYB61                    <-------   <---------At4g35610                                 <---------MYB52(1)             ===============   <---------ANAC55(2)                               <-----------RAV1(1)              ===============   --------->ANAC55(2)                      <-----------RAV1(1)                       ------>ZmHOX2a(1)  --------->MYB59               <---------ANAC58     <---------MYB46(3)           <---------ARR14(2)  >>>>>>>GRF7 <---------ARR11(3)<---------ANAC58   <---------At4g35610         <---------TOE2(3) <-----------RAV1(2)          <-----------GT1     ------->TEIL                 <---------TOE1(2) ----------HVH21------>ZmHOX2a(2)        <---------MYB52(1)        <----------DOF2--------->ARR14(2)   atgtcaggtaatagctgatcttgatcatgttttttcttgttctgttttgttgcatctgttggtttaatgcttttgttttctgaggttcctctcttctttt  6366100    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  --------->ARR11(3)  <---------ARR11(3)  --------->AGP1------->TEIL  >>>>>>>>>GATA-1                                    --------->ATHB12  >>>>>>>>>GATA-4                                   <---------YAB1    ---------->DOF2  >>>>>>>>>GATA-3                      ------>ZmHOX2a(2)    <----------DOF2    <---------ANAC58  >>>>>>>>>GATA-2                    --------->ARR11(3)<---------GLK1(1)  <---------ANAC58 --------->GLK1(1)--------->YAB1     <---------ARR11(3)--------->GLK1(1)  <---------ANAC58     <----- ---DOF2 <---------AHL20(2)        <---------YAB1 --------->YAB1  --------->TOE1(3)   <---------ZAT14 ==========HOX2a_HOX2a   <---------ANAC58         <---------ICU4  --------->TOE2(3)<---------ANAC46 =========HOX2a_HOX2a    <---------ANAC58        --------->ICU4<-----------GT1 <---------ANAC58<-----   gagagatctatgaaattgaatcttgatgcgagagactatgatctatgtttcattatgatttccttttaccttcaaagcttgtcttgagtatacaagtgct  6366200                           <---------YAB1                       --------->KAN4(2)                      --------->KAN4(1)                      <---------KAN4(1)                      --------->HSFB2a(1)                      <---------HSFB2a(1)                     --------->ARR14(2)                                      ----------->GT1  <---------DAG2     <---------KAN4(2)                                     <---------ANAC58  <----------DOF2   <---------GLK1(2)                                      <---------ANAC58 ----ANAC58--------->HSFB2a(2)             <-----------GT1                <---------STY1(2) ----ANAC58<---------HSFB2a(2)   <---------TOE2(3)     <---------MYB52(1) --------->STY1(2)   tgcacttttgtgcctagaaacagaatattcttattgatgttgtttttatctcatgcaggtatgtagaaaatgaactggctagtgacattagtgtcgatgt  6366300                       --------->DAG2         <---------GLK1(2)                                                                   --------         <---------ARR14(3)                                                    <------ZmHOX2a(2)         --------->ARR14(3)                                              --------->ARR14(2)  <-------         --------->ARR11(3)                    <---------ARR11(3)  <---------ANAC58       <-------TEIL         <---------ARR11(3)            ---------->ID1   ------->TEIL     <---------ARR14(2) ------->TEIL    <------ZmHOX2a(2)  <---------TOE2(3)       --------->ARR11(3)  <---------ANAC58   --------->ALFIN1   tgagggatcaagattttgtctgcataaggtatgtacaatttgtctccaagttcttatgcacatctgtttacttgggattcgatcactcgtggtgcatctg  6366400  Previous    Next  AGI:  At2g14810.1    Description:  unknown protein Range:  from: 6364547    to: 6365552    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g14820.1    Description:  phototropic-responsive NPH3 family protein. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G67440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63961.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71996.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66911.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333) Range:  from: 6365946    to: 6368382    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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