Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       ------>ZmHOX2a(1)                                         ------                               ------->MYC2                                              <---------WRKY12                               <-------MYC2                                              <---------WRKY38(1)                               <-------MYC3                                             --------->WRKY18(1)                               ------->MYC3                                            <-----------HVH21                              --------->ANAC58                                     <---------ANAC58                           <---------SPL7                                          <---------ANAC58                       <-----------RAV1(1)                                      <---------MYB46(3)                    <---------MYB46(3)    <----------DOF2                      <---------AtMYB61    <             --------->REM1(1)--------->ANAC58            <---------MYB46(3)--------->ATHB12   <-----   acgtttgtacaacttacatcagttgttgtggcacgcgtcctcttctttgaactctcacattggttgaacattttctcatcagtggtcgtggtcaaggagt  6330000                                                                          --------->LBD16                                                                          <-----------HVH21                                                                         <---------ANAC58                                                                     <---------ARR14(2)                                  ----------->RAV1(1)           --------->LBD16 --->GLK1(1)                     ----------->HVH21            <---------LBD16 -----------RAV1(2)  <---------ANAC58                    <----------DOF2 <---------ANAC58    <------- ----GLK1(1)         <---------ANAC58       ---------->DOF2  <---------At5g28300             --------   tctcaggctgtagcatactatggtcgtggttttctgcgacagtctccaaaggcaagaggcttttaccggagtattccgtcgcatcacattcacttgtctc  6330100                                                                              --------->LBD16                                                                              --------->ZAT14                                                                            --------->LBD16                                                                            <------NtERF2                                <---------ANAC58                           --------->DEAR3(1)                            <-----------HVH21                           --------->DEAR3(1)                  <---------ANAC46                                     --------->ATERF1(1)                  <---------ANAC58                                     <------NtERF2           <-------TEIL   <---------WOX13(1)                         <---------bZIP60(1)       --------->ANAC58  <---------ANAC58                            --------->bZIP60(1)    ------>MYB46(1)      <---------ANAC58                        --------->LBD16    -------->P    <---------ANAC58     <---------ALFIN1         <---------bZIP60(2)                <-    ------>MYB83 <-------TEIL   <---------ANAC58                <---------ANAC58                   -- --------->MYB46(3)     --------->ATHB12                        <---------ANAC46     --------->MYB46(3) --CCA1(2)--------->CCA1(2)<-----------RAV1(1)                  <---------ANAC58 --------->At5g28300 -->ID1--------->ANAC58<---------YAB1------>ZmHOX2a(1)          <---------O2------>NtERF2          <-   ttcaccaacaaggtacaagttcgtgttgattgtcgcgtcctccatcccattgttatcttcttcttgccgtggcatcgccgcgcagtaaccactataacta  6330200                                                                     <-------GAMYB                                                                    <---------MYB46(3)                                                                   <---------DEAR3(1)                                                                   <---------ANAC58                                                                   <---------RAP2.6(2)                                                          <---------MYB52(1)                                                        <---------ANAC58                                                        <---------ANAC58                         <---------ALFIN1               <---------ANAC46                   ----------                      --------->RAP2.6(2)            <------MYB83  <---------DREB2C(2)  --------->RAP2.6(2)                   --------->ANAC58                  <------MYB46(1)--------->MYB55(2)  --------->ANAC58             --------->ANAC58                      <--------P   --------->ALFIN1        --------->DEAR3(1)             --------->ANAC58                    <---------MYB46(3)<---------ANAC46     ------->GAMYB      ------>ZmHOX2a(1)  --------->AtMYB61       --------->MYB55(2)<---------ANAC58     --------->ANAC46    ----------->RAV1(2)------>NtERF2            <---------AtMYB61------------>AtMYB77   --------->ANAC58 --------ZAT14     --------->ANAC46           <---------MYB46(3)<---------DEAR3(1)     --------->DEAR3(2) ------->ZAT14     --------->ANAC58          --------->ALFIN1 --------->ALFIN1         --------->MYB46(3) --------ZAT18   ---------->DOF2             <---------AtMYB61<-----------RAV1(1)     ------->TEIL<--   ctgctctcctgagagaagcaaaagccaccattccattgagaaccctggtggtggtaggccgtgagtgtggcggttgtctctgaagatgaaccgccacaag  6330300                                                                 ------->PIF5                                                                 <---------MYB52(1)                                                                 <-------PIF5                                                                <---------DEAR3(2)                                   --------->At4g35610          <---------At4g35610                                   --------->ZAT2              <---------MYB46(3)                             --------->DAG2                    <---------DREB2C(2)                            ---------->DOF2                    <---------DEAR3(1)                  <---------At4g35610                  --------->LBD16              --------->ANAC58     <---------ZAT2    <---------LBD16              --------->ANAC58     <---------At4g35610 ------>NtERF2 <---------ANAC46 --------->At4g35610           <---------ARR11(3)                                --- ->RAV1(1) <------NtERF2<-------TEIL            --------->ARR11(3)                  <---------ANAC58 ------P<------ZmHOX2a(1)--------->YAB1  ------>ZmHOX2a(1)    <---------ORA47(1)    <---------ANAC58   gttgctcataggaggcaaggagctgattcataaagtcagcttcctctgtatatattccgcctaggccggtgctccattctcccatggcttccatttttga  6330400                                        --------->ARR14(2)                                        <---------ARR14(2)                                     --------->AHL20(2)                                     <---------AHL20(2)                                    --------->AHL20(2)                            <------ZmHOX2a(1)                                    <---------AHL20(2)                     <---------WOX13(1)                                    --------->YAB1            <------------CBF    ===================                              --------->TOE1(3) --------->ANAC58          <------------CBF                          --------->AHL20(2)    <---------ANAC55(2)      --------->ATHB12           <              --------->ZAT6  --------->TOE2(3) --------->ANAC55(2)      <--------ATHB1            --         <----------DOF2  <---------AHL20(2)    --------->ANAC58        --------->ICU4      <-------- ------>ZAT6 ------------>CBF --------->YAB1 <---------MYB52(1)         <---------YAB1    <---------ANAC46   tcactaagcgactttaacaatagactaattaatcttaattaaaatccgataagtaatgtgagagtattgaaggaatgattgagaggagtttgatgtgtgt  6330500                                           ------------>CBF             <---------YAB1               --------->ANAC58           --------->YAB1                 --------->ANAC58          <------ZmHOX2a(2)           <-----------HVH21         --------->ARR11(3)       <---------AHL20(2)      <-----------GT1         <---------ARR11(3)      <---------AHL20(2)   <---------YAB1 <-----------TBP                 --------->AHL20(2)  --------->TOE2(3) ================HOX2a_HOX2a <---------YAB1--------->MYB46(3)------->GAMYB--------->DAG2 ---------AHL20(2)           --------->AHL20(2) --------->AHL20(2)       ---------->DOF2        <---- ------->AHL20(2)    --------->MYB52(1)  --------->WOX13(1) --------->MYB46(3)                  ----- -ANAC46<------ZmHOX2a(1)    <---------AHL20(2)<---------ATHB12  <----------DOF2 <---------AHL20(2)   attatatataggatcatgagaagtaatggatataattaaatgtcaaccaataaaacattataaccatctttagaataaagtatttttttgggtaaccagg  6330600                           -------->HAHB4                           --------->AHL20(2)                           --------->YAB1                                   ----------->GT1                          <---------YAB1                                   ----------->GT1                         <-----------TBP                     --------->ARR14(2)             --------->CCA1(2)                    ---------->ID1  <---------MYB52(1)               --            --------->ARR11(1)       ---------->DOF2<----------DOF2    --------->YAB1          ------ -----ARR11(3)       <---------At4g35610      <----------DOF2<---------ARR11(3)   --------->GLK1(2)-- ---->ARR11(3)       --------->At4g35610 ---------->DOF2    <---------CCA1(2)     --------->ARR11(3)   tcttgatacccatagatatgaacagctaattatagagcttaaagaaagctttgtctttctctatatctgttaagcatgagttaaaatctgtatttagtca  6330700                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                         --------->YAB1                                       <---------ARR14(2)                          --------->YAB1                         <------ZmHOX2a(2)                                         --------->TOE2(3)                        <---------ARR14(2)                                        <---------YAB1     --------->AHL20(2) --------->ARR14(2)          ----------->GT1       ------->TEIL--------->YAB1 ------->YAB1           <-----------ARR10      <---------ANAC46          <---------CCA1(2) --->ATHB12            <------ZmHOX2a(1)  --------->TOE1(2)       <-------TEIL    ----------->GT1 --------->GT1---------->DOF2          --------->ARR14(2)    <-----------RAV1(2)--------->YAB1   ttggtaattcaatacaaaaagaagaggatcagacctatacaaatccttggaggggagataaatccaggttcaactgtatctattatgttaataatataga  6330800                                                <---------YAB1                                       <------ZmHOX2a(1)                                      ----------->GT1                                --------->REM1(1)                               <-------TEIL     <---------AHL20(2)                           --------------->AtSPL3                ------->TEIL----------->GT1    <---------AHL20(1)             <---------YAB1<---------------AtSPL3           ------->TEIL                           --           --------->YAB1  <---------------AtSPL8   --------->YAB1                                ---           <---------ICU4  --------->DAG2      --------->AHL20(1)         --------->TOE1(2)       <--          --------->ICU4 ---------->DOF2       --------->AHL20(2)         <---------LBD16     <------    ----------->GT1    <------ZmHOX2a(1)    --------->AHL20(2) --------->WOX13(1)             -------   gttgtgaagaaaataatgaatgtaaggaaaaggtacaactaggaaaaaatataattgtgatgtatcaatcccaaaaccagggacttatacatatgtttaa  6330900  Previous    Next  AGI:  At2g14760.1    Description:  basic helix-loop-helix protein / bHLH protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G33880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN79863.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 6328669    to: 6330394    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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