Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->DAG2 --------->ANAC58                                           ---------->DOF2 --------->ANAC58            ------->TEIL                <------MYB46(1) ---------TOE2(3)        --------------->AtSPL8          <------MYB83 ------->MYB52(1)        <---------------AtSPL3         --------->MYB59 ->TEIL --------->ATHB12 --------------->AtSPL3         --------->MYB111(1) ------ARR10             <---------------AtSPL8    ---------->DOF2 ----ARR11(1)           ---------->DOF2           <------ZmHOX2a(1)<-----------RAV1(2)    <---------HSFB2a(2) --->GLK1(2)       --------->ICU4      ==================HOX2a_HOX2a               --------->ANAC58 ---ARR14(1)     ---------->DOF2       <------ZmHOX2a(2)--------->MYB46(2)         --------->ANAC58   ctaacgaaatcgattgaagaaaagatgaaagtacctccacgatcaactaagaggaaagtaggtaaagcaccaggctgagacttgaacgaaatcgagaaat  6311000                                                  ------>MYB46(1)                                                 --------->ANAC58                                                 --------->ANAC46                                                 --------->ANAC58         <---------GLK1(1)                                              --------->SPL7              --------->GLK1(1)                                            <---------SPL7              <------ZmHOX2a(1)                                         --------->MYB52(1)           <---------TOE2(3)     <--------                      <---------GLK1(2) --------->AtMYB61       --------->ZAT14             ---------                    <---------YAB1     --------->MYB46(3)       <---------ZAT14     <-----------GT1                <---------GLK1(1)      <---------MYB55(2)   <---------ALFIN1 <---------HSFB2a(2)        ------>ZmHOX2a(1)        <------ZmHOX2a(1)------>MYB83  <---------SPL7 --------->LBD16     --       <---------ANAC58        <---------TOE2(3)--------->MYB46(3)--------->SPL7  --------->HSFC1(2)       <---------ANAC58     <----------DOF2--------->DEAR3(1) --------->ANAC46--------->LBD16     <--   cgctaaattccttacacgatttctgattctctttaggataaaccaccgtaccagccatacttccaccgtactgaggaatcccgaagttaccaattgcact  6311100                                  --------->ORA47(1)                                 --------->DEAR4(1)                                 --------->DEAR3(1)                                 --------->DREB2C(2)                                 <---------ETT(1)                                 --------->At1g77200                            <-----------HVH21                      --------->LBD16 <---------YAB1       ------>NtERF2 -ZAT18              <---------DEAR3(1) >ZAT18  <----------DOF2   --------->bZIP60(2)                             --------->DAG2 ------->YAB1       <---------LBD16                        ------->TEIL  ---------->DOF2 -------YAB1  <-----------GT1   --------->DEAR3(2) --------->ANAC46 ----------->GT1                >>   atcatgagttccttttatactctccggcgaagtcaccgacaaactattcttctccacaacgaatcgagcctcgttaaaaggggaaaccacaagagagaga  6311200                                                        ------->GAMYB                                                       <---------MYB52(2)                                                ------>NtERF2                                                --------->LBD16                                           --------->GLK1(1)                                          <---------ARR14(3)                                          --------->ARR14(3)                                          --------->ARR11(3)                                          <-----------ARR10                                          <---------ARR11(3)                                          --------->ARR14(2)                                          <---------ARR14(2)                                       --------->HSFB2a(2)                                   <------ZmHOX2a(1)                                       <---------HSFB2a(2)                          --------->AHL20(2)                                --------->REM1(1)      --------->MYB46(3)           <---------AHL20(2)                              <----------DOF2  --------->ANAC46                     --------->AHL20(1)                            --------->At4g35610--------->DEAR3(1)                   <---------AHL20(1)        --------->AtLEC2 --------->At4g35610  <---------LBD16               ========================HOX2a_HOX2a   --------->ANAC58      <---------At4g35610------>ZmHOX2a(2)         --------->MYB52(1)   <---------TOE2(3)   --------->ANAC58      <---------HSFC1(2)<---------GLK1(1)    ------>MYB46(1)  --------->YAB1 >>>>>>>TBF1             --------->HSFC1(2)<------ZmHOX2a(2)    ------>MYB83<------ZmHOX2a(2)========   agaagaagccatggaagataacatagaagctgcttcatcttcgagatctccgcctcaacaaacaccaaattcaaacggatcaacaataaatttaaggagc  6311300                                      <---------WOX13(1)                                   --------->ICU4                             --------->ATHB12                            <---------YAB1                                                    <------                            --------->ICU4                                          <-------TEIL                          --------->CCA1(2)       <---------HSFB2a(1)             <---------GLK1(2)                     ---------->DOF2--------->ATHB12      <----------DOF2         --------->ARR11(1)                   --------->YAB1  <---------YAB1 --------->HSFB2a(1)             --------->ARR14(2)                --------->WOX13(1)<---------TOE2(3)     ------>ZmHOX2a(1)         <---------ARR14(2)              <------ZmHOX2a(2)<---------WOX13(1)--------->ARR11(3)       --------->ATHB12    <------ ====================HOX2a_HOX2a --------->YAB1  <---------ARR11(3)      <---------YAB1       <------   aagtagatggaatcggatcattcaaaagagatgattgatgattggatttgaaatcttcctctttgtatgtgctcgatgattgtagattcgtagttggagt  6311400                                                                                               ------                                                                                               ------     --------->LBD16                                                                           ------    --------->LBD16                                                                          ------>NtERF2   <---------HSFB2a(2)                                                                --------->GLK1(1)   --------->HSFB2a(2)                                                               --------->ARR11(3)  <---------LBD16                                                                    --------->ARR14(2) ---ANAC58                    <-----------GT1  --------->ALFIN1                      <---------ARR11(3) ---ANAC46            <<<<<<<<<<MYB80    *TSS<---------ANAC46            ---------->DOF2    --------- ---ANAC58 --------->GLK1(2)  <---------DOF5.7(2)            --------->ANAC46        <---------ARR14(2)   gttttcccgagagaatcgagagatggtttgtttaacgtcttagattggagtggaagactatagacgacgcttattcaaagtcaaacagatatcgacgacg  6311500                                                           <---------GLK1(1)                                                     ---------->DOF2                   ----------->GT1                                                  <---------AHL20(2)                   --------------         <---------AHL20(2)                    --------->AHL20(1)                  --------->ZAT18        --------->AHL20(2)                     <---------AHL20(1)                  <---------ZAT14     --------->YAB1                           --------->AHL20(2)                   <---------ARR14(2)    <---------YAB1                        <---------AHL20(2)                       --------->ZAT14 --->ANAC58               ----------->GT1 --------->AHL20(2)               <---------ANAC55(2) --->ANAC46           ------------>CBF --------->AHL20(2) <---------ARR14(2)   --------->DAG2 --->ANAC58     <------------CBF      <---------AHL20(2)  --------->ARR14(2)  ---------->DOF2   <---- >DEAR3(1)  --------->GLK1(2)         --------->AHL20(2) <------ZmHOX2a(1)<-------TEIL <-------------   aaactcattataaaattctattgagacaatgtaaaaacaaataaataaatatataaaaaggatttgtgacaacaaatacataaagtatactgtataatgt  6311600                                             <---------AHL20(2)                                             --------->AHL20(2)                                            --------->AHL20(2)                                      ----------->GT1                                   --------->YAB1                                  <---------YAB1                                                    -  <---------ANAC58               <---------AHL20(1)                                 <---------AHL20(1)  <---------ANAC58               --------->AHL20(1)                                 --------->ARR11(3)  <---------ANAC46               --------->AHL20(2)                              --------->AHL20(2) < ->AGL15                         <---------AHL20(2)                <---------TOE2(3)--------->AHL20(1) -----AHL20(2)                  --------->YAB1       ----------->GT1       <-----------GT1<---------TOE2(3) --AGL15   <-----------GT1     <---------YAB1--------->AHL20(1)<----------DOF2<----------DOF2 -------   aattgtgtgtttataactattttctaaatctctattataatagaaaaaaaattaagagtaatttgttttatggatttttacttttatatattgagaataa  6311700                           <---------AHL20(1)                           --------->AHL20(2)                           --------->ARR11(3)                           <---------AHL20(2)                           --------->AHL20(1)                      --------->AHL20(2)                 <---------YAB1                                             <---------ANAC46              <---------AHL20(2)                      <---------AHL20(2)    <---------ANAC55(1)              --------->AHL20(2)<---------AHL20(2)   <---------AHL20(2)     --------->ANAC55(2)      ---------->DOF2 <---------AHL20(2)             --------->AHL20(2)     <---------ANAC55(2)     <---------AHL20(2)   --------->AHL20(2)     --------->AHL20(2)         <---------ANAC58     --------->AHL20(2) --------->AHL20(2)       <---------AHL20(2)         <---------ANAC58 --------->AHL20(2)--------->AHL20(2)           <---------AHL20(2)         --------->MYB52(2) -------->AHL20(2) <---------AHL20(2)        --------->AHL20(1)          <<<<<<<<<MYB98 ---------AHL20(2)--------->AHL20(2)    ----------->GT1    ----------->GT1<-----------GT1           < -->AHL20(2)<----------DOF2<---------ARR11(3)<---------ARR11(3)        <---------YAB1 <----------DOF2   atataaattaaagtcttttattaaaaaaatatattatatgcattgtatatattaattaaatgggttataagttatgttacttgtcaagcttttcttagca  6311800                                                                            <---------AHL20(2)                                   <---------AHL20(2)                      <---------AHL20(1)                             <----------DOF2                   <---------AHL20(2)                          <---------ARR11(1)       ----------->GT1         <---------ARR11(3)                          --------->ARR11(3)       <---------ZAT6         <---------CCA1(2)                <-----------GT1   <---------AHL20(2)      <-------TEIL---------->ID1   --------->CCA1(2)     <---------CCA1(2)     --------->ICU4  --------->AHL20(2)           --------- ---------TOE2(3)    <-----------HVH21      --------->AHL20(2)--------->AHL20(2) <---------YAB1   tttagatttgggaatttttcacatgtcaaatctttttttatttgaagtaattagtgtaaattcatttaatttgtccatatattttgatttagaataaagt  6311900  Previous    Next  AGI:  At2g14720.1    Description:  VSR-2 (Vacuolar sorting receptor 2); calcium ion binding. Identical to Vacuolar-sorting receptor 4 precursor (VSR4) [Arabidopsis Thaliana] (GB:Q56ZQ3;GB:O80979); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.2); similar to vacuolar sorting receptor, putative [Arabidopsis thaliana] (TAIR:AT2G14740.1); similar to ATELP/ATELP1/BP-80/BP80/BP80B/VSR-1/VSR1 (ARABIDOPSIS THALIANA EPIDERMAL GROWTH FACTOR RECEPTOR-LIKE PROTEIN), amino-terminal vacuolar sorting propeptide binding [Arabidopsis thaliana] (TAIR:AT3G52850.1); similar to Vacuolar-sorting receptor 1 precursor (BP-80) (80 kDa proaleurein-binding protei Range:  from: 6307570    to: 6311441    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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