Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------ARR14(2)                                                   --------->ARR14(2)                                                 --------->At5g28300                 <---------YAB1                 --------->ANAC46               --------->YAB1                   --------->TOE2(3)                           <--------         --------->ZAT6                         --------->TOE1(3)                          ----------       <-----------GT1                        <---------At5g28300                     <---------YAB1  --------->AHL20(1)                         <-----------GT1                    <---------TOE2(3)  <---------AHL20(1)                     ------->TEIL       <-----------GT1     <---------TOE1(3) <---------CCA1(2)               --------->At5g28300 <------------MYB.PH3(1)    <---------YAB1      - ------GT1    <---------YAB1 --------->MYB52(1) ------->GAMYB           --------->MYB52(1)--------->AHL20(2)   cttatatattaactctattatagttatcaaataactgtaaatgtatttaaccgtaactgttttaactgcatatataacggttaagattacgattaaagaa  6305400                                                               ------->GAMYB                                                               --------->ANAC46                                                               --------->TOE2(3)                                                             <---------At5g28300                                                            --------->MYB52(1)                                                      --------->TOE1(3)                                                      --------->ANAC46                                        >>>>>>>>>GT-1 --------->TOE2(3)                 <-------GAMYB          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <---------MYB46(3)    <-------GAMYB<xxxxxxxxxxxxxxxxsmallRNA(i)           ----------->RAV1(2)        xxxxxxxxxxxxxxxx>smallRNA(i)         <---------ARR14(2)          --------->MYB55(2)     <-----------GT1        <---------MYB52(1)           ----------->GT1  ----------->GT1      --------->ANAC46        <---------ARR14(2)   --------->ARR14(2)      --------->TOE1(3)       --------->ARR14(2)   <---------ARR14(2)<---------ICU4      ------->GAMYB          ----------->HVH21     --------->MYB52(1)--------->YAB1               ---    <---------At5g28300    --------->TOE2(3)    --------->TOE2(3)   <---------ATHB12              ---   <-----------GT1 >>>>>>>>>GT-1     <---------MYB46(3)--------->At5g28300                  <-------- -TOE2(3)--------->ARR14(2)--------->TOE1(3)    --------->TOE1(3)   --------->ICU4          --------- >DOF2--------->TOE2(3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->TOE1(3)<---------MYB59   --- -------->YAB1  ----------->GT1    <---------MYB52(1) ------->GAMYB <---------YAB1--------->MYB52(1)   aattataaccgtaacctgtggttaataaaccgtaaccggtggttaataaaccgtaaccgtaataaccgtaatcatagtcatgcctaactaatagaattcc  6305500                                     --------->ARR11(3)                                     <---------ARR11(3) --------->MYB52(1)                 --------->RVE1(1) ------>ANAC46                      --------->CCA1(1)                          <---------CCA1(2)  <-- ------>ANAC58               ----------->RAV1(1)                        <---------CCA1(2)         --- -GLK1(1)                   <----------ID1                            <---------CCA1(2)           <-- >GLK1(1)                 --------->ANAC46          ---------->DOF2 <---------ANAC58              --- ------>ANAC58            --------->AtLEC2      --------->TOE2(3)   <---------ANAC58        ---------   aagtaactggatttagaacttataatctatgcaacaaaatatcatctatacattaaaagagagttttgatgcttatctctcaaatctattgttttcatat  6305600                          ---------->DOF2                   --------->ATHB51                   <---------ICU4                   -------->ATHB1                   <---------AHL20(2)                   -------->HAHB4               --------->AHL20(2)    <---------YAB1 --------->YAB1                            <------ZmHOX2a(1)   <---------AHL20(2)   <---------YAB1               <---------------AGL15   <---------AHL20(1)<---------YAB1                 --------->TOE2(3) <---------YAB1<---------AHL20(2)                   --------->YAB1 -------AHL20(1)   <--------HAHB4                 <---------ARR14(2) ------>AHL20(1)  --------->ICU4                  <---------ARR11(3) -------AHL20(2)  <---------ATHB51                --------->ARR11(3)          --------->AHL20(2) ------>AHL20(2)  <---------YAB1                  <-----------ARR10     ----------->GT1 >YAB1 <-----------GT1--------->YAB1             --------->RVE1(1)  --------->ARR11(3)   tttattatttttcatttttaattattataaaagaaaacaaaaactatttgaatatcttaattaggagatttatcttgaaaaaaaatcgaaatggtataga  6305700                                                             ----------->GT1                                                             *TSS                                                           <---------ANAC58                                                           <---------ANAC46                                                           <---------ANAC58                                                          ------->TEIL                                                          <-------TEIL                 <---------YAB1                         --------->TOE1(2)              <---------YAB1                            --------->TOE2(2)              <---------AHL20(2)                        <---------SPL7             <---------AHL20(2)                        <---------ANAC58             <---------AHL20(1)                       --------------->AtSPL3             --------->AHL20(2)              <---------AHL20(1)             --------->AHL20(1)              --------->ARR11(3)          --------->AHL20(2)                 <---------ARR11(3)       <---------AHL20(2)          <---------AHL20(2)                 --------->AHL20(1)       --------->AHL20(2)          --------->YAB1            <---------YAB1    <---------------AtSPL8       --------->YAB1             <---------ZAT6      <---------------AtSPL3     --------->AHL20(2)       ------>ZmHOX2a(1)   --------->YAB1     --------->AHL20(2)     --------->AHL20(1)      --------->TOE2(3) <------------CBF   --------->ICU4               <-----    --------->YAB1      <<<<<<<<<MYB2    --------->YAB1<---------ANAC58 <---------TOE2(3) <------ZmHOX2a(1)   aaacaaaaataataatataattcttggttttccttagtattattcaaaatattgataacgtacgtgtaaaaattaatgaaattggaaatagaggacgtct  6305800                         <---------ICU4                         --------->YAB1                   <---------YAB1                         -------->HAHB4                 <---------AHL20(2)                        --------->ICU4                  --------->AHL20(2)                        <---------ATHB12               <---------AHL20(1)               <---------ANAC55(1)                     --------->AHL20(2)               <---------ANAC55(2)                     <---------AHL20(2)                        ----               --------->ANAC55(2)                     --------->AHL20(1)                      ------               <---------ANAC58                      ------->TEIL                 ----------->HVH21          <---------------AtSPL8            <---------ANAC58                    --------->At4g35610          <---------------AtSPL3            <---------ANAC58             --------->AHL20(2)  -------- ----ANAC46    <---------ANAC58             <---------ANAC46      <---------MYB46(3)     <---------YAB1   tgtacaatagggatagtacgtgtctaatgatcacctagacatttttgcgtagatgaatttatttttgtttgttcattatatccactgacatatgatataa  6305900                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                          <-----------GT1                                                   ---------                    <---------MYB46(3)                                                      ---------                    <------MYB83        --------->CCA1(2)               <-----------RAV1(2)------->TEIL                    <------MYB46(1)    <---------AHL20(2)               <---------LBD16  <---------ZAT18                <-----------RAV1(1)    <---------AHL20(1)        --------->TOE1(3)  ---------->DOF2 ----->ZAT6  <---------AHL20(2)        --------->AHL20(1)        --------->TOE2(3)  ================= --->YAB1   <---------AHL20(2)    --------->AHL20(2)     --------->ANAC58  <------ZmHOX2a(1)========= ->AHL20(2) --------->AHL20(2)  <----------DOF2          --------->ANAC58 --------->LBD16--------->ZAT18   tactacttaacaaattaaatgttggtttttactccttttaatatatgagagaagaaactaagcaaaaccctaattcaggagaaacagatagcgcacctga  6306000                                                                     --------->PCF2                                                                 <---------ANAC58                                                                 <---------O2     ----------->GT1  --------->At4g35610                        <---------TGA1a    --------->DAG2    <---------At4g35610                        --------->TGA1a  ---------->DOF2    --------->ARR14(2)                 --------->ARR11(3) ->TOE1(2)           --------->GLK1(2)                  --------->ARR14(2) >TGA1a              <---------ARR14(2)         <---------WOX13(1)  <-----------HVH21 -->RAV1(2)       <---------ANAC58         <---------At4g35610   --------->O2 -ZAT2            <---------ANAC46         <-------GAMYB<---------GLK1(2)      XXXXXXXXXXXXXXXXXXXX>MIR837-5P -At4g35610       <---------ANAC58         ================================MYC_MYB >At4g35610    --------->ALFIN1   ------>MYB83--------->ATHB12   <---------ANAC58 >ZAT2  ---------->DOF2        --------->HSFB2a(1)      <---------ARR14(2)    <---------CCA1(2)  ---- =bZIP_DOF   --------->CCA1(2) <---------HSFB2a(1)      <---------ARR11(3) --------->TOE2(3)     <--- ============bZIP_DOF------->TEIL ------>MYB46(1)     ----------->ARR10 <---------ALFIN1 --------->MYB52(2)   gaaaaaaaggtaaagagatggcgcatctgaaaaaccttccatgggagttgattgaagagatactctctcgtgtcccacctaaatctctcgttcgcttcag  6306100                                                              <---------bZIP60(2)      <---------ARR14(2)                                                              <---------ANAC58         --------->ARR14(2)                                                    --------->AtMYB61                 ------>MYB46(1)                                                    ------->GAMYB                     ------>MYB83                               ------>NtERF2       --------->MYB46(3)             -------->P  <------                              --------->ANAC46    -------->P<---------TGA2(2)     --------->ANAC58                  --------->ANAC58               ------->GAMYB<---------ANAC58    --------->ANAC58                  --------->ANAC58              <---------MYB55(2) <---------ANAC58 ------->GAMYB<---     ----------->GT1   <----------DOF2          <---------MYB111(2)<---------ANAC46 --------->AtMYB61 ----->ARR14(2)   --------->HSFB2a(1)           --------->MYB46(3) <---------ANAC58--------->MYB46(3) ------ARR14(2)   <---------HSFB2a(1)    <-------TEIL      ----------->TGA1--------->TOE2(3)  -------   aaccgtatcgaaacaatggaacgctcttttcgacgacaagacgttcatcaacaaccacaagatgacgtttcgttttatcttagcaaccaaatccaagatt  6306200                              <---------ANAC55(2)                              <---------ANAC58                              <---------ANAC46                              --------->TGA1a                              <---------ANAC58                              --------->ANAC55(2)                              <---------TGA1a                             <-------TEIL                           <---------SPL7                                                      ------                   ----------->HVH21                                                     <---------WOX13(1)                  --------->LBD16                                                       <---------ANAC58      --------->ANAC58   <---------------AtSPL3               --------->GLK1(2)         <---------ANAC58      --------->ANAC58   <---------ZAT6              <---------TOE1(2)                 --------->ATHB12 --------->MYB59 --------->ANAC55(2)         --------->ANAC55(2)--------->ATHB12     <--------P<----- ---ARR11(3)     <---------ANAC46         <---------MYB52(1) <---------GLK1(2)       <---------WOX13(1) ------AHL20(2)  <---------ANAC55(2) <-----------GT1 --------->LBD16                <-------GAMYB -->ARR11(3)  <------ZmHOX2a(2)   --------->MYB52(2)<-----------RAV1(2)       --------->ARR11(3)    <   tattcggtaagcatcgatcccgtgatagtggtacgtgagttacccttaggtattccaggtttagaatctttggaacttaataacttggttgattgcaatg  6306300  Previous    Next  AGI:  At2g14710.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G16580.1); similar to unknown [Arabidopsis lyrata] (GB:AAL65603.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 6305761    to: 6307232    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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