Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ZAT2                                                                         <---------At4g35610                                       <---------DAG2               --------->ANAC46--------->ANAC58                                       <----------DOF2              --------->ANAC58--------->ANAC58 ----->LBD16             ---------->DOF2      ----------->HVH21     --------->ANAC58--------->ANAC46- ->DEAR3(1)         --------->ZAT6  ------>ZmHOX2a(1)  <---------CCA1(2) <---------ZAT2            <-   gaaaacgtttctcccattcttctcactaaaagtcattcctacttttctctgactctcatttctcaacttcacccaagctgattcacacacaattcaaaaa  6292700                                                                                 ------->GAMYB                      ----------->RAV1(1)                                   <------ZmHOX2a(2)                     --------->MYB46(3)     --------->HSFB2a(2)            --------->ARR11(3)                     --------->REM1(1)    -------->P                       <-----------ARR10                   ----------->RAV1(1) <---------ANAC58                    <---------ARR11(3)                --------->ANAC46       <---------ANAC58                --------->LBD16           <---------ZAT14     ----------->RAV1(1)            <-----------GT1  --------->At4g35610           --------->ZAT14   --------->MYB46(3)         ------->TEIL  --------->LBD16 -------->YAB1  --------->ANAC58------>MYB83<---------HSFB2a(2)      --------->HSFB2a(2) --------YAB1   --------->ANAC58------>MYB46(1)      <---------ANAC46<---------HSFB2a(2)          <--   catcataacttactacacaagcaacaacaaaaccaacattttcttaccagaagtgatgtatatgtttccttcccgaagatcaactccctctactacattt  6292800                                                             <---------ANAC46                                                     ------------>AtMYB77                                                <---------MYB52(1)                                               --------->LBD16                                             <-----------------AGL1  <---------ATERF1(1)                                           --------->DEAR3(1)<---------ANAC58                                        --------->REM1(1)  <---------MYB46(3)                    =========================HOX2a_HOX2a  <---------MYB52(1)                    ------>ZmHOX2a(2)   <---------ALFIN1 <---------At4g35610                  --------->ARR11(3)  ------>ZmHOX2a(1)  <-------GAMYB--------->ATERF1(1)--------->YAB1                  <---------ARR11(3)  <-----------HVH21 <---------MYB46(3)          <---------DAG2 -------YAB1  <-------GAMYB  <----------DOF2 <---------LBD16 <---------ANAC58       <----------DOF2   ctgattccaccattttcgttgatcttcaattctttgactccttcacctccggtattggcagttgtttgtggaggctccatgaggcactttctcatgacat  6292900                                                                                                   <-                                                                                                   ==                                                                                                   ==                           <---------TOE2(3)                                                     <---                 <---------ANAC58                                                                <---                 <---------ANAC58                             <----------DOF2                  <-----            <---------ICU4--------->AHL20(2)     <---------AHL20(2)    <-----------GT1         ------      <-------TEIL        --------->YAB1      ------->TEIL ---------->ID1                     <------   tacatagattcaaaacattgcattccattaatatttgtaagtgaaatgtatttatagatttgttctttttgttatacctctgattttagagactggtcgt  6293000             >>>>>>>>>>ABI3             >>>>>>>>>>FUS3            --------->ANAC58            --------->ANAC58         <-------TEIL         ------>ZmHOX2a(2)        <------ZmHOX2a(2)        =====================HOX2a_HOX2a       --------->ARR14(2)       <---------ARR14(2)      <------ZmHOX2a(1) -----ZmHOX2a(1) ==============HOX2a_HOX2a ===============HOX2a_HOX2a                          --------->ANAC58 ------TOE1(2)        ------>ZmHOX2a(1)              --------->ANAC58            ------->TEIL       - ------TOE2(2)      ----------->RAV1(2)             --------->DAG2   --------->ANAC58           <---- ----SPL7====================HOX2a_HOX2a           ---------->DOF2   --------->ANAC58           <---- --->TOE1(2)--------->AtLEC2               --------->CCA1(2)        --------->DAG2          <-------- ---MYB46(3)--------->ANAC46      >>>>>>>>>TBF1  <------ZmHOX2a(1) ---------->DOF2         <---------ICU4   aggagaaaggatccatgcaaattcctgaaccaagaagaagaagagagatgaggaaaagcaccaagtggaaaaagccatagttgaatcttttcatcttttc  6293100                                                                                                  ---                                     *TSS                                                         ---                                 --------->CCA1(2)                                        <---------AHL20(2)                                --------->ARR11(3)                                       --------->AHL20(2)                                <---------ARR11(3)                              --------->ANAC55(2)                        ------>ZmHOX2a(1)                   <---------KAN4(1)   <---------ANAC55(2)   <---------YAB1      --------->TOE2(3)                    --------->KAN4(1)   ----------->GT1  <--- ---------->HVH21   <---------ARR14(2)                     <---------KAN4(2)  --------->ICU4     ---- -----ANAC58        --------->ARR11(3)        <---------HSFC1(2)       --------->YAB1    --------->YAB1 -----ANAC58        <---------ARR11(3)        --------->HSFC1(2)      <---------YAB1    <---------YAB1 --DOF2             --------->ARR14(2)        --------->HSFB2a(1)   --------->YAB1   --------->ICU4 -   ttgtgacaattgagaactcaaaaatcctcaatgagatatgtatgacgacccttcttgtgggattaatccattatcatgaaataagtaactattatatagc  6293200            ------->TEIL         <---------ANAC46         <---------ANAC55(2)         --------->ANAC55(2)        <-------TEIL    <---------------AtSPL8         -------->HAHB4    --------->DAG2                 <---------ICU4    <---------------AtSPL3         --------->YAB1                                 ----------->GT1  ---------->DOF2                 --------->ICU4                           --------------->AGL15 ------>ANAC58                    <---------ATHB51                         <----------DOF2 ------>ANAC58                  --------->YAB1                             <---------------AGL15 ------ZAT18<---------ARR14(2) <---------YAB1         <---------YAB1       ========================== ----->ZAT18--------->ARR14(2)<---------AHL20(2)    --------->YAB1       <---------YAB1 -------->ANAC46<-------TEIL  --------->AHL20(2)--------->ICU4         <---------CCA1(2)<-----------GT1   acacaaaaggtacgtatatacatatttcttattttaataatgccagtggaataagtataattttcaaattttcttatctttatattgtatatactgtata  6293300                                                    --------------->AGL15                                                 --------->ANAC58                                                 --------->ANAC46                                           <---------AHL20(2)                                           --------->YAB1                                           --------->AHL20(2)                                          <---------YAB1                                        --------->YAB1                                       <---------AHL20(2)                                       <---------YAB1                                       --------->AHL20(2)                                      <---------AHL20(2)                     --------->YAB1   <---------AHL20(1)                   <---------YAB1     --------->AHL20(1)                  ----------->GT1                 --------->YAB1       --------->AHL20(2)  --------->HSFB2a(2)                 <--------HAHB4     <---------YAB1  <---------------AGL15<---------TOE1(3)       ----        <---------TOE2(3)          --------->AHL20(2)     <---------HSFB2a(2)                 -------       ---------->DOF2 --------->ZAT6--------->YAB1<-----------------AGL3<---------TOE2(3)------->TEIL --------->ICU4 <---------YAB1  --------->TOE2(3)--------->ANAC58   <---------TOE2(3)    <---------AtLEC2 ===================================================================MADS_MADS     --------->YAB1<----   gcaatgttttaaagttctattattaatactataacattaatataattatataagctatttttagaacaccaaggtaaggtttttttataatgcatgtagt  6293400                                                         <---------ZAT6          <---------HSFB2a(2)                       <-----------GT1       <---------ANAC58                    --------->HSFB2a(2)             <---------YAB1                  <---------ANAC58          ---------->ID1 ----->YAB1  <---------AHL20(2)              <---------ANAC46   <---------AHL20(2) ---->GT1--------->AHL20(2)  <-------TEIL <----------DOF2----------->GT1 <----------DOF2            < -----ZAT6   --------->AHL20(2)--------->TOE2(3)     ---------->DOF2  <-----------GT1         <------   gataacttcatatatataattgtttttaatatacattagagaaactttcgtgtctcaaagtgttattttttttttctttttttctaaaactgtattttac  6293500               <---------ATHB12           ----------->GT1       <---------ATHB12             --------->DAG2             <---------ARR14(2)              <-----     --------->WOX13(1)      --------->TOE1(3)       <----------DOF2     <-------TEIL          ------   <---------YAB1            --------->TOE2(3)       --------------->AGL15                     <----- ---------AHL20(2)      --------->YAB1   ----------->GT1       --------->ARR14(2)             ------- -----GT1     <---------TOE2(3)    ---------->DOF2   <---------------AGL15  <---------At4g35610------   atataatcaatgaactaatgaagaaataataccttagtaaaggggggaaaatatacttttaatcgaaactgcaaatacatctcacgagaaaacacattaa  6293600  Previous    Next  AGI:  At2g14690.1    Description:  endo-1,4-beta-xylanase/ hydrolase, hydrolyzing O-glycosyl compounds. similar to glycosyl hydrolase family 10 protein [Arabidopsis thaliana] (TAIR:AT4G33820.1); similar to glycosyl hydrolase family 10 protein [Arabidopsis thaliana] (TAIR:AT4G33810.1); similar to endoxylanase [Carica papaya] (GB:AAN10199.1); contains InterPro domain Glycoside hydrolase, family 10; (InterPro:IPR001000); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 6290883    to: 6293137    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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