Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------ANAC55(2)                     <---------ANAC46                     --------->ANAC58                                                <------ZmHOX2a(1)                     --------->ANAC55(2)                                            <------MYB46(1)                     <---------ANAC58                                               <------MYB83                     <---------ANAC58                                              --------->MYB59                     <---------ANAC55(1)                                           ----------->GT1                     ----------->GT1                                              <--------P                     --------->ANAC55(1)                                       --------->DAG2                     --------->ANAC58                                          <---------------AtSPL8            --------->ATHB12                                             <---------------AGL15            -------->HAHB4             --------->YAB1                 <---------AHL20(2)            --------->YAB1 <---------AHL20(2)                        --------->AHL20(2)            --           <---------YAB1 --------->AHL20(2)      <---------ANAC46   <---------AHL20(2) ---------->DOF2 --------YAB1   <---------------AtSPL8<---------ATHB12          <---------DAG2 <---------TOE1(3)<---- ->ICU4 --------->ICU4    --------->ICU4        <---------ANAC46<----------DOF2<---------TOE2(3)<----   taacatagaactaattataggttacgtaataaatagtctaatcaaaagttttgtgtataaatctcactttttttaatagataaggtaggaaaaagaataa  6284900                                                                                  --------->YAB1                                                                              <---------MYB55(2)                                                                       --------->ARR11(3)                                                                       <---------ARR11(3)                                                                       --------->ARR14(2)                                                                       --------->KAN4(2)                                                                      --------->KAN4(1)                                                                      <---------KAN4(1)                                                                      <----------TaMYB80                                                                      --------->HSFB2a(1)                                                                      <---------GLK1(1)                                                                      --------->GLK1(1)                                                                      <---------HSFB2a(1)                                      <------ZmHOX2a(1)              <---------KAN4(2)      ---------                                    <---------TOE1(3)                ---------->TaMYB80   --------->At4g35610                                 <---------MYB52(1)            <---------ANAC46------->GAMYB---------                             ------>ZmHOX2a(1)            <---------ICU4      <---------MYB52(2)                           ==================HOX2a_HOX2a <---------AHL20(2)   --------->MYB46(3)                           ------>ZmHOX2a(2)             --------->ICU4<---------ARR14(2)--------->GLK1(2) ------->CCA1(2)      <---------WOX13(1)    --------->GLK1(2)  <---------TOE1(1) ------->TEIL -----TOE2(3)      --------->LBD16  <---------TOE2(3)    --------->AHL20(2) --------->MYB52(1)   ---- -----YAB1       <---------LBD16<-------GAMYB       ----------->GT1<------ZmHOX2a(1) --------->YAB1   gatagaaaacacttactaaaccggattgatcctcggttaaggagaaattcggttttgaaaaaattacgaggaatatcccaacgaacataataatctgacg  6285000                                     <----------ID1                                    ----------->GT1                                   --------------->AtSPL3                                   <---------------AtSPL8            --------->AHL20(2)       <---------YAB1              --------->DAG2                    <---------AHL20(2) ------------>CBF       --------->ICU4            ---------->DOF2             <----------DOF2      ------------>CBF -->HVH21                  <----------ID1      <----------DOF2       <------------------------ANAC81 -->TGA1                 >>>>>>>>>TBF1 <-------TEIL          ------>ZmHOX2a(1)   <-----------GT1 <--- ------>DOF2        <----------ID1--------->DAG2           ------>ZmHOX2a(2)<----------DOF2      ----   aaaggagtcatttttggtcaaaacgaagaagaacaaaaaggtacaaacactttctctctgatcctttttttttaatttctttttctcaatttcaatcttc  6285100             <---------GLK1(1)             <------------CBF                                                               ---------    <---------TOE2(3)                                                                 <----------DOF2    <---------TOE1(3)                                    --------->ZAT14     <---------At4g35610 ------HSFB2a(2)                                     ------>ZmHOX2a(2)       --------->At4g35610   <- ----->HSFB2a(2)          --------->ICU4       <----------DOF2     <---------LBD16--------->GLK1(1)--   tcgattagggtttggaattgcccttggaatgttgaattttaagacttcgctttgatctgtaaactaatttcagggtctcatctgaattctttgttgattt  6285200                                                                --------->DAG2                                                         <---------At4g35610                                                         --------->At4g35610                                                     --------->ARR11(3)                                                     <-----------ARR10                         <-----                                                     <---------ARR14(2)                        <-----                        <---------ARR14(2)           --------->ARR14(2)          --------->AtLEC2       <---------LBD16  --------->ARR14(2)           <---------ARR11(3)          --------->ANAC46 >ATHB12               <------ZmHOX2a(1)             --------->GLK1(2)           --------->ANAC58   - --------At4g35610   <---------TOE1(3)         ----------->RAV1(1)   ----------->GT1        <-------- ------->At4g35610   <---------TOE2(3)       --------->MYB46(3)---------->DOF2   --------->ANAC58  <-   gagatgagttctgggtttttgctaaggatttgtttttatgtcttctaagcaccaaaatctgctcaaaaagtctgtaaatttccaagcaagttgtttactt  6285300                                        ------>ZmHOX2a(2)                                      --------->ARR11(3)                                      ------->TEIL                                      <---------AGP1                                <---------ATHB51                           <------ZmHOX2a(2)                         --------->At4g35610     <---------ZAT6   <---------At4g35610                                                         --- ----DAG2          --------->At4g35610<---------ARR11(3)                                         <--- -----DOF2       ------>ZmHOX2a(2)    --------->ARR14(2)          ---------->DOF2            -------- -------->YAB1 <---------ARR11(3)     <---------ARR14(2)      <-----------ARR10              <------- ---GT1  --------->ATHB12<---------At4g35610                  --------->GLK1(2)              <------- --------YAB1  --------->ARR11(3)  <---------TOE2(3)      --------->YAB1     <------ZmHOX2a(2) <-----   tttcatagtgttgatttgatcttctgcagatcaaattatggatcttaatttagatgaaaatgagaatctaaaggctcggatcaaacaacttgaacatggt  6285400                         --------->MYB111(1) -------------------->TaNAC69(2) ----TEIL                <---------MYB46(3) ------->AtSPL8         <--------P --------AtSPL3    <-----------RAV1(1)                                    ---------->DOF2 <----------DOF2 --------AtSPL8<---------------AGL15         --------->ICU4<---------HSFB2a(2)           <---------ANAC58 ----SPL7  --------->ANAC46            --------->LBD16     --------->HSFB2a(2)           <---------ANAC58   acgttttctctacaagtctctatgtggtagttatttagaccctggacatgtttataagcttatagaaatgggtttctaaagtcttacatttgcttctctg  6285500                   <---------At4g35610                   --------->At4g35610              <---------ARR14(2)         <---------ANAC46                                                                     -------     --------->HSFB2a(2)                              --------->TOE1(2)      --------->YAB1<---------     <---------HSFB2a(2) <---------MYB52(1)   <---------ATHB12        <---------YAB1       <---------DAG2   aagccttcttgaagtgtattctgctccattagtttgtcatctagtccaatctatttcatacgatagctatttcttattctcatgaccacttagcttttcc  6285600                  <-------TEIL               --------->At4g35610                         --------->TOE2(3)   <---------ANAC58              <----------DOF2        --------->YAB1   <---------ANAC58       <---------YAB1             --------->YAB1 --->ID1       <---------At4g35610                  <---------YAB1          <----------DOF2 -DOF2------>NtERF2  ---------->DOF2           <<<<<<<<<TBF1              <---------YAB1   catttccctgccttctcagatgcaaaagatgattccttttagttatttcttcttcttataatcttagaaatgagttatctttagcaaatggggatgagtt  6285700                                                       ------->TEIL                                                    <---------ANAC55(2)                                                    --------->ANAC55(2)                                                   --------------->AtSPL8                    <-------                                        --------------->AGL15                                <-------                                        <---------------AGL15                              <---------YAB1                                       <-----------------AGL2  --------->YAB1           <---------MYB52(1)                                  <---------YAB1   <---------------AtSPL3            --------->ZAT18                      <---------HSFB2a(2)          --------->MYB59     <----------DOF2 <-------GAMYB                      --------->HSFB2a(2) <----------DOF2   <---------CCA1(2)     --------->ALFIN1   aagaaacatttgaagacatcacttgtagaagttgttctcattctcttttgggttatgtacttatatcatatgtcttttgctactgtgtgcgttatgcttg  6285800  Previous    Next  AGI:  At2g14680.1    Description:  MEE13 (maternal effect embryo arrest 13). similar to CIP1 (COP1-INTERACTIVE PROTEIN 1) [Arabidopsis thaliana] (TAIR:AT5G41790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63989.1) Range:  from: 6285338    to: 6290998    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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