Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ---------->DOF2                                                                                  <----------DOF2                          <---------AHL20(2)                                      --------->TOE2(3)                     <---------MYB52(1)                               --------->WOX13(1)                    <-------GAMYB  --------->At4g35610              <---------At4g35610                   <---------MYB46(3)                               --------->At4g35610    --------->MYB52(1) --->GT1        <-----------HVH21  <---------At4g35610          <-----------HVH21 --------->TOE1(3) -AGL15      <---------ANAC58    <-----------RAV1(2)     --------->AHL20(2)    <-----------GT1------- --AGL1      <---------ANAC58 <-----------GT1           <---------AHL20(2)    <---------AHL20(2)  ---   aaatttagtttaaaatcgtgtccgttgtttatttgccagatggcattttctattagatttaaaatatgtcagcaatctatttaactttaatgcgaacgga  6251500                                            <-----------GT1                                         <---------------AtSPL8                                         ----------->GT1                                       ---------->DOF2                             ----------->GT1                              <---------ARR11(3)                       ----------->GT1               --------->At5g28300   --------->AHL20(2)               <---------TOE1(3)    <---------AHL20(2)      --------->ARR11(3)      --------->GLK1(2)                       <---------TOE2(3)    --------->AHL20(2)      <---------ARR11(3)  --------->YAB1--------->DAG2         <---------YAB1   <---------AtLEC2  <-- ---->GT1     <---------MYB46(3)     <---------AHL20(2)      --------->YAB1    <-------TEIL--------->AHL20(1) ------>AHL20(2)<---------MYB52(1)   --------->YAB1        <---------WOX13(1) --------->AtLEC2 <-----   taaaatgagattttagcggttaacttgatcaaaatctaataaaaagttacaaactaaaatgaatgataaatgaaggttacatgcatggagaaatttttta  6251600                        --------->ICU4                      --------->YAB1                      --------->AHL20(2)                 <---------MYB59         <---------ANAC58            --------->AHL20(2)                                         <----         <---------ANAC58<---------ICU4        ---------->DOF2<---------ANAC55(2)          --------->ANAC58 --------DOF2  ------>NtERF2 ----------->GT1 <---------AHL20(2)     --------->AHL20(2)     --------->ANAC58 ------GT1  --------->At4g35610   <---------YAB1       --------->YAB1    <---------ICU4  <------ZmHOX2a(1)   ctttgtaaatgacttgctgcctaataaaaattagttatttttaatatttaaaagaaaacataatatgtaagttaataagtatgaattgtaaggaagcaaa  6251700                                     --------->ANAC55(2)                                     <---------ANAC55(2)                     ========================                                     --------->ANAC58                   <---------RVE1(1)                                     --------->ANAC46                   <---------CCA1(1)          ----------->GT1            --------->ANAC58                  <---------ARR11(3)     <---------ANAC58               <---------TOE1(2)                  --------->ARR11(3)         ---     --------->ANAC55(2)           ------>ZmHOX2a(1)                   --------->ARR14(2)      <-----     <---------ANAC58             --------->TOE1(2)                   --------->YAB1     ------------    <---------TOE2(2)             --------->TOE2(2)                ---------->DOF2   --------->ANAC46    <---------TOE1(2)          --------->GLK1(2)          <---------ANAC58   --------------->AGL15<--   <-----------GT1        ---------->DOF2                 <---------ANAC58--------->GLK1(2)    <----- -----ATHB12   ---------->DOF2<---------GLK1(2)       <----------DOF2----------->ARR10<------ZmHOX2a(1)   cattcttacgttttgaaaaaagaaaacaaaaagattcctacgtaagtatgtattctctttgcttctccacaaagatattctttgtataggacacaattta  6251800                                                <---------ARR11(3)                                               <---------AHL20(2)                                             <-----------TBP       ------------>CBF                 ==============================HOX2a_HOX2a      --------->ANAC46                  ----------->GT1                                   --------->ANAC58      --------->ANAC58                  ------>ZmHOX2a(2)      *TSS        <----------DOF2--------->ANAC58 =====================================================================MADS_MADS     <---------DAG2 ------>TOE2(3)                 <---------ATHB12--------->AHL20(1)      <---------AHL20(2)--------->ANAC46 ------GT1  ------------>CBF    ------------>CBF--------->ARR11(3)      <-----------GT1   --------->AtLEC2 >CBF --------->ANAC58    <-----------GT1<-------GAMYB         <------ZmHOX2a(1)    <----------DOF2 --------DOF2         ----------->TBP--------->YAB1           --------->ANAC46 <-----------GT1 ----AHL20(2)        ------->TEIL   <---------ATHB12  --------------->AGL15--------->TOE2(3)   ctttaaacacacaatacaatatgtatatatactaatcaatgatcgttatatatattctttgtataggacacaatttactttaaacacttttcatgcaata  6251900                                                                  <---------ICU4                                                                  --------->YAB1                        ------>ZmHOX2a(2)                --------->ARR11(3)                        ----------->GT1           --------->TOE1(3)           <---------AHL20(2)                     --------->YAB1               --------->TOE2(3)          <---------ATHB12                <---------ATHB12            --------->ANAC58     <---------AHL20(2)          <-----------GT1<-------GAMYB      --------->ANAC58     <---------ATHB51     ------->TEIL   <---------ATHB12     <---------SPL7  <---------ARR11(3)--------->YAB1         <--   caatatgtatatatactaatcaatgatcgttatatatgtccatcgtactcaacctcaaacatcttaaataatgactctaataaatcgctcaaaaccattt  6252000                                                   <---------HSFC1(2)                    <---------ICU4                 --------->HSFC1(2)        <---------TOE2(2)                         --------->ANAC58       --------->ARR11(3)        <---------TOE1(2)           <---------YAB1--------->ANAC58       <---------ARR11(3)    --------->HSFB2a(2)           --------------->AGL15            <-----------RAV1(2)        -------    <---------HSFB2a(2)          <-----------------AGL2   <---------MYB52(1)     ---------->DOF2 <--- ---------GT1       --------->YAB1<---------------AGL15  <-------GAMYB<------ZmHOX2a(1)   <----------DOF2   gtacttctcgtaggcttctcaattatctcaagtttgctattatgggtctcacaagcttccgttgtttcatcaggagattttaacaaagacttctttgtga  6252100               --------->DOF5.7(2)              --------->TOE1(3)              --------->TOE2(3)             --------->ANAC58             --------->ANAC46             --------->O2      <---------AtMYB61             --------->ANAC58<---------ICU4                          <---------MYB52(1)        ------>MYB83         --------->YAB1                         ----------->GT1        ------>MYB46(1)      <--------ATHB1                     --------->ARR14(2)        -------->P <---------ALFIN1                            <---------GLK1(2)       ------>ZmHOX2a(1)    --------->ICU4     --------->TOE1(3)<---------ARR14(2) ---->HVH21<---------ALFIN1 <---------ATHB12   --------->TOE2(3)--------->GLK1(2) ------bZIP60(2) <---------DOF5.7(2)  <------ZmHOX2a(2)   <------ZmHOX2a(2)                      ----   catggtctcctacccacgttaacacctccaatgatggtcgatcaagaacccttaaactcgatcaagaatctggtattttcatatatatgtccaaatgtcc  6252200                                             --------->HSFC1(2)            --------->LBD16                  --------->HSFB2a(1)           --------------->AGL15             <---------HSFB2a(1)                                 <---          <---------LBD16                  <------ZmHOX2a(1)                                    -----          ----------------->AGL1   --------->YAB1            --------->AtLEC2            --------->CCA1(2)        <-----------GT1         --------->YAB1    <----------DOF2                       --------->ARR11(1) -->ZmHOX2a(1)                 <---------YAB1<---------HSFC1(2)                ------>NtERF2    <----   tcgttatatttttccgcattgagaacttatgttttgataatattaggagcttctttttcttccattcagacgttcttgttcggccaaatagatatgaaga  6252300                                 <--------P                      --------->ANAC58                      --------->ANAC46          <---------------------WRI1<---------ANAC46         --------->LBD16        <-------GAMYB  --------->ANAC58         <---------LBD16       <---------MYB46(3)        <---------ANAC46      --------->ALFIN1 --------->ANAC58                                    <-        <---------ANAC58 --------->ARR14(2)--------->ANAC55(2)                                     --        <---------ANAC58 <---------ARR14(2)<---------YAB1                                         --- ---ZmHOX2a(2)        --------->ANAC58     <---------ANAC55(2)                                    <-- ---->ARR11(3)  --------->ARR11(3)  <---------ANAC58                           <--------P       ----- -----ARR11(3)  <---------ARR11(3)  <---------ANAC58                     --------->MYB52(1) ------->TEIL   tcaaacttatccgtggaagttctcaaggaaccgtggttgcttattatgtaagaaaccgtctctatctcttcatcttaacgggttgatgtgaatgaatctc  6252400  Previous    Next  AGI:  At2g14620.1    Description:  xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative. Identical to Probable xyloglucan endotransglucosylase/hydrolase protein 10 precursor (XTH10) [Arabidopsis Thaliana] (GB:Q9ZVK1); similar to xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putative [Arabidopsis thaliana] (TAIR:AT5G65730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49843.1); contains InterPro domain Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320); contains InterPro domain Xyloglucan endotr Range:  from: 6251863    to: 6253315    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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