Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->YAB1                                                           <------ZmHOX2a(2)                                                          --------->ARR11(3)                                             <---------ICU4<---------YAB1                        ----                     --------->TOE2(3)    --------->ANAC46<---------ARR11(3)  <---------TOE2(3)  ----            <---------ICU4                --------->ANAC55(2) <---------YAB1  <---------YAB1   <-----         --------->bZIP60(1)   <---------ANAC58      <---------O2      <-----------------AGL3  <-----         <---------bZIP60(1)   <---------ANAC58      --------->O2     <---------At4g35610      ------ <---------AtLEC2   --------->ATHB12  <-----------HVH21  <------ZmHOX2a(1) <---------YAB1    <-------   tatgcatgatcacatcattacttcattagtatggcttctcgttcacataattcccacgaggatcatagttgcaactgattatggttccaccattgttaca  6249100                                                                                    --------->ZAT14                                                                                   <---------ANAC46                                                                                  <------NtERF2                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                         ------->PIF4                                                                         <-------PIF4                                                                         ------->MYC2                                                                         ------->MYC3                                                                         ------->MYC4                                                --------->ZAT18          <-------MYC4   <----------DOF2                              --------->ZAT14          ------->PIF5 ----->ANAC46                                   <---------ZAT14          <-------MYC2 ----->bZIP60(2)                             <---------ANAC46            <-------PIF5 ------GT1                  <----------DOF2  <---------ANAC58            <-------MYC3    <---------REM1(1) ----ALFIN1<---------ARR14(2)                <---------ANAC58           --------->ANAC55(2) --->REM1(1)   --------->LBD16      --------->ANAC46                   ------------>OsbHLH66 ----GT1   --------->ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR2934             <------------OsbHLH66   cctcactttggcacatccgagtctcactgactttctccaaacaacttgagtgtagtgaccacaaactccattgcacgtgttcgcagcgtagttgtagtta  6249200                                ------>NtERF2                               --------->ANAC46                               --------->ANAC58                               --------->ANAC58                              --------->ATERF1(1)                             <---------ATERF1(1)                                ----------->RAV1(1)                            --------->ARR14(2)                                 <---------ALFIN1                            <---------ARR14(2)        <-----------RAV1(2)   --------->PCF2                          <---------ATERF1(1)     -------->P               <-----------TCP11(1)                          --------->LBD16        <---------ALFIN1        --------->SPL7                         <---------ANAC46 ----------->HVH21              ---------->DOF2                         <---------DEAR3(1) <---------At5g28300         <---------MYB52(1)                      --------->ANAC46   <-----------HVH21             <-----------HVH21                     <---------At5g28300--------->ANAC58               --------->LBD16               ------->MYC3--------->ATERF1(1)--------->ANAC46        --------->ANAC46               <-------MYC3<------NtERF2--------->ANAC46             <---------LBD16              <--           ------->GAMYB<---------LBD16 --------->ANAC58             --------->LBD16              ---         -------->P  <---------LBD16    --------->bZIP60(2)        <-----------------AGL1         <--   gccttctcgctaacccacatgttcacggcggagacgccagacaagtcaccgctaccccaggctaagttttccccgtaaggcccaccagagtgtatgagtc  6249300                                                                             ------>MYB83                                                                             -------->P                                                                            --------->MYB55(1)                                                                         ------>NtERF2                                                                        --------->ANAC58                                                                        --------->ANAC58                                                                       ------>MYB46(1)                              --------->LBD16                          ------>MYB83                         --------->ZAT2                              --------->AtMYB61                         <---------ZAT2                              <---------SPL7    <-------PIF5 --------->At4g35610     --------->At4g35610                         --------->TOE1(2) ------->PIF5 <---------At4g35610     <---------At4g35610              --------->ANAC46 --------->DEAR3(1) <-------GAMYB          ----------->ARR10     ------->GAMYB        --------->PCF2    ------>ZmHOX2a(1) -------ZAT14        <---------ANAC58    --------->At4g35610      <---------PCF2<---------At4g35610 ------>ZAT14        <---------ANAC58    <------NtERF2  <---------ALFIN1--------->ANAC46   <---------ANAC46 -------At4g35610  <---------ANAC46      <---------At4g35610 <---------AtLEC2------>MYB46(1)   tgcagttgcctcttagttgttctgcgtagctccgagcataggctgcaaccctctcgtcccactgcatgggacctacgcctaccgctcctcgtgcctggtt  6249400                   <---------ZAT18            --------->GLK1(2)                                  <---------ARR11(3)            --------->ARR11(3)   <----------DOF2          -------->P ---------->DOF2     <---------MYB52(1)        <---------At4g35610        ------>MYB46(1)     --------->AHL20(2) ------->TEIL      --------->ZAT18   <---------LBD16      ------>MYB83     ----------->GT1      -----   gtgaacccttagataatcttgtgggctatcttgagctttcgagggaagaacaagagcacctacaagagctacaaagacgattaaaaatcgagaatagcca  6249500                                           --------->ARR11(3)                               <-----------RAV1(1)                              <---------YAB1 *TSS                                               <----                           <---------YAB1--------->ICU4            <-----------TBP           <-------    <-------TEIL        --------->ICU4   <---------YAB1     <---------ICU4   --------->CCA1(2)------- ------>GT1           <---------ICU4<---------ZAT6   <-------TEIL<---------ANAC46         <---------AHL20(2)   gtaaaattcatttttctaagttgataatggttattgttgtgttatgattttggggttcgtaaacatcgcttatatagagatttgaaaactatttttttct  6249600                              ----------->GT1                        --------->ANAC55(2)                       <---------TOE1(2)                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                                  <---------ICU4 ------DOF2       --------->ARR11(3)            ------->MYC3          --------->ATHB12 ----GT1          <---------AGP1                <-------MYC3         <-------TEIL --->ID1          <---------ARR11(3) <-------TEIL--------->ALFIN1 --------->ICU4       <---------ATHB12   ttttttttttgttaactatagatctcacgtttttgtaaatacatggtccatgtgtgagtattttagtaatattcattgcaattgtccaaatgaatagaag  6249700                                                                   <--------P                                                              <---------ARR14(2)                                                              --------->ARR14(2)                                                           <---------ANAC55(2)             --------->AHL20(2)                                                ------>ZmHOX2a(1) <---------MYB52(1)       <---------AHL20(2)                                               --------------->AGL15   <----------DOF2   <---------AHL20(2)              <---------AHL20(2)     --------->ANAC46      --------->ANAC55(2)        --------->ARR11(3)    <---------ANAC58            ------>ZmHOX2a(1)          <---------ANAC58           --------->AHL20(1)    <---------ANAC58  --------->WOX13(1)     ---------->ID1<---------ANAC46           <---------AHL20(1)    --------->ANAC55(2)      ---------->ID1 <-----------GT1<---------ANAC58           <---------ARR11(3)   ttgttttcgtaactatttttttgtcaatcttgtccttacacacatttttcctaatattgtttcgtatcggtagctttgccattgttgatatattttttta  6249800                                                                          <---------ANAC46                                                                    <---------MYB52(1)             <-                                                                   <-------GAMYB             <-------               --------->TOE2(3)         ----------->GT1           <---------At4g35610       --------           --------->ARR14(2)    <---------TOE2(3)            --------->WOX13(1)      <-----------GT1   gtatatatgtaagtataccctaaatgaagtttattaagaaacattgtatatagttgtttcatgtcattcagttgttttgtgttttttttttcttcatgat  6249900                                                                       ------>ZmHOX2a(1)                                                                       ----------->GT1                                                                <---------ARR11(3)                                                                --------->ARR11(3)                                                               <---------CCA1(1)                                               --------->YAB1  <---------GLK1(1)                                             --------->AtLEC2  <---------RVE1(1)                                      <-----------GT1          --------->CCA1(1)   <---------AHL20(2)             --------->AHL20(1)           --------->RVE1(1)                 ---- --------YAB1                     <---------AHL20(1)           --------->GLK1(1)              <------ --YAB1                           --------->AHL20(2)          <---------ARR11(3)              ------- ->ICU4                          <---------CCA1(2)            --------->ARR11(3)   ----------->GT1   tctaatttaagtcttctatttcaaatttgaatttcatatattacttcattcaaaatgttttgaagatatcttcctgtaaataatacagaaaaatcgtatc  6250000  Previous    Next  AGI:  At2g14610.1    Description:  PR1 (PATHOGENESIS-RELATED GENE 1). Identical to Pathogenesis-related protein 1 precursor [Arabidopsis Thaliana] (GB:P33154); similar to ATPRB1 (Arabidopsis thaliana basic pathogenesis-related protein 1) [Arabidopsis thaliana] (TAIR:AT2G14580.1); similar to pathogenesis related protein 1 [Eutrema wasabi] (GB:BAF03626.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283); contains InterPro domain SCP-like extracellular (InterPro:IPR014044) Range:  from: 6248786    to: 6249545    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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