Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->ATHB51                      <---------ICU4                      --------->ATHB12                     --------->ICU4                     <---------YAB1                   --------->YAB1                  <------ZmHOX2a(2)                 --------->ARR11(3)                 <---------ARR11(3)                <------ZmHOX2a(1)            --------->LBD16                 >>>>>>>>>>>>>>>>>LFY      <---------ARR14(2)           --------->LBD16            <---------MYB46(3)      <----------DOF2           --------->ANAC46          <---------YAB1           <---------DAG2          --------->LBD16         <---------YAB1        <---------At4g35610          <---------GLK1(2)          <---------LBD16         --------->ICU4      --------->REM1(1)   --------->LBD16         <---------LBD16     <---------At4g35610    <-----------GT1   --------->ARR14(2)  <----------   ttcgcatagttccccggaggatcataattgcaactgatgatggttccaccattgttacatctcactttagcacatccgagtctcacagaatttctccaaa  6232900                                ------->MYC2                                ------->MYC4                                              --------->REM1(1)                                <-------PIF5                                              <---------ALFIN1                                ------->PIF5                                          <---------At4g35610                                <-------MYC4                                     --------->ANAC46                                ------->MYC3                                     --------->ANAC58               --------->RAP2.6(2)        <---------ANAC46                       --------->ANAC58   <               --------->ANAC58 <-------MYC2                                    <---------LBD16    --               --------->ANAC58 <-------PIF4                                  <---------ZAT14      --           ----------->HVH21    ------->PIF4                                 <-----------HVH21     --       --------->ZAT18          <-------MYC3                           --------->ANAC46 ----------->RAV1(1)       <---------ZAT14         --------->ANAC55(2)                    ------->GAMYB   --------->At4g35610    <---------ANAC46      <---------MYB52(1)    <---------REM1(1)  <---------DOF5.7(2)<------NtERF2-- -GT1  --------->ZAT14   <-------GAMYB    --------->YAB1         --------->DOF5.7(2) --------->RAP2.6(2)   cgacctgagtgtagtgaccgcaaactccgttgcacgtgtttgtatcgtagttgtagttagccttctcgttaacccacaagttcacggcagcaacaccaga  6233000             <----------DOF2           <---------DAG2                --------->LBD16        <---------ALFIN1              <---------ALFIN1      ------>NtERF2                --------->PCF2      --------->ABI4(1)         ---------->DOF2     --------->DREB2C(2)        --------->SPL7<---------HSFB2a(1)     --------->DEAR3(1)        <---------MYB52(1)                                       <---------ANAC58     --------->ANAC46         <-----------HVH21--------->TOE1(2)                     --------->ARR14(2)    --------->MYB46(3)        --------->LBD16---------->TaMYB80                      <---------ARR14(2)   <---------At5g28300       --------->ANAC46<---------KAN4(2)    <----------DOF2  ----------->ARR10   <---------ATERF1(1)      <---------LBD16  <---------------AtSPL3             <---------ANAC58 -----------HVH21           --------->LBD16  <---------------AtSPL8       <------MYB46(1) ------->ANAC58           <-----------------AGL1         <---------ZAT14  <---------MYB46(3) <------- ------->ANAC46       <---------ARR11(3)--------->O2     <---------At4g35610    <---------ANAC46    < ------->ANAC58       --------->ARR11(3)--------->ANAC46 --------->ZAT14  <------MYB83  <---------ANAC58 ------->bZIP60(2)    <-----------ARR10<---------LBD16   --------->At4g35610    <---------ANAC58 ----   caagtcaccgccactctttgccaagttctccccgtaaggcccacgggaatgtacgagtctgcagtctccttttagttggtttgcgtagttccgagcgtag  6233100                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                    --------->ARR14(2)                                ------>NtERF2                               --------->ANAC58                               --------->ANAC58                              --------->SPL7                             <---------ATERF1(1)                            <---------SPL7   <---------ANAC58                           --------->ATERF1(1)                          --------->PCF2     ------>ZmHOX2a(2)                       <---------ANAC58                    <---------AtLEC2<---------ARR14(2)                         ------>NtERF2            ---------->ID1------>NtERF2      <---------ANAC58                 <---------ATERF1(2) --SPL7 ------>ZmHOX2a(1)<---------PCF2     <------ZmHOX2a(2)    --------->AHL20(2)  <---------ANAC58 ------NtERF2  <---------ALFIN1--------->ANAC46   <---------ANAC46           <---------ANAC58 ----->At4g35610 --------->ANAC46  <---------CCA1(2)   <---------MYB46(3)    <---------ANAC58   gctgcaagtccttcgtcccactgcatggggcctacgcctatctgcgatcgtgcctggttgtgagcatttacatagtcttgctggctgtcttgagccttca  6233200                       --------->At4g35610                      --------->ALFIN1                --------->ANAC46     --------->YAB1               --------->MYB46(3)   <---------YAB1              --------->ANAC58   <---------YAB1              --------->ANAC58  <---------ARR11(3)           <----------DOF2       <---------ICU4             --------->PCF2     <---------GLK1(2)    <---------ANAC58              --------->MYB52(1)           --------->ZAT18    --------->ICU4         <---------ANAC46             --------->ICU4           <---------ZAT18------>NtERF2              <---------ANAC58             <---------ATHB51  <   agggaacaacaagagcacccacaagtgctgccaagattattagaattcgagagtagcttgtgactttcatttttcttagttgaaataatggctatttcca  6233300                                                                                   --------->AHL20(2)                                                                            ----------------->AGL1                                                                        <---------ANAC58                                                                        <---------ANAC58   ----------                                                                 <---------ANAC58  <---------AHL20(2)                                       <-----------TBP           <---------ANAC58 --------->AHL20(2)             <---------YAB1            --------->AHL20(2)     <----------DOF2   --------->YAB1        <---------ZAT6          <---------ICU4             --------->ARR11(3)  --------->ICU4      *TSS   --------->ICU4    --------->ICU4              <---------ARR11(3)<---------------AGL15 ----------DOF2--------->ARR11(3)<------------CBF--------->CCA1(2) <---------MYB52(1) --------->AHL20(2)   agctttgtttgtgttatgattttggggtttgtaaacattgtttatatagagatttgaaaactatctttcgttttgtttgccataataaataaacaaagtc  6233400                                                                                                  ---                                                                        ----------->RAV1(1)    ------                                                                        ------>MYB46(1)       <------                                                                     --------->ANAC46   --------->STY1(2)                 <----------DOF2                             --------->AHL20(2)         <---------STY1(2)           <-----------GT1                                ----------->GT1     <---------AHL20(2)  <--          <-----------GT1                        <------ZmHOX2a(1) <-----------GT1    <--------P<----         --------->AHL20(2)             <----------DOF2 <------ZmHOX2a(1)    --------->AHL20(2)<----- >DOF2   <---------AHL20(2)            <---------DAG2--------->CCA1(2)  ------>MYB83 <---------MYB52(1)   ttgctgaacatttaaacctcttttatgggtttaatctttcacctttggataggagataggagataaaataaacccaacatttaatacggtagctagtcgg  6233500                                                                                            ------->GAMYB       >>>>>>>>>MYB98                                                                <---------AHL20(1)     ----------->HVH21                                                  --------------->AtSPL8 ------>ARR14(2)                                                        <---------------AtSPL8 ------ --->HSFB2a(2)                                                         ---------->DOF2   <-----------GT1 ---LBD16                                                         --------->TOE1(2)  --------->AHL20(1) -------ARR14(2)                                                  --------->TOE2(2) --------->AHL20(2) --NtERF2                                                        --------->YAB1   --------->AHL20(2) ----HSFB2a(2)                  <---------CCA1(2)         ---------->DOF2    ----------------->AGL3   gaaccccctaacccataggtctaaatttcttctcacatcttcatatgaaaacaatttttaaaaagaaacataagaaagtaccaaaaatatataacagcct  6233600                                                                             ------>MYB46(1)                                                                             ------>MYB83                                                                           ------->GAMYB  <---------AHL20(2)                                                                           --------->AtMYB61                                                                           <---------MYB59<---------YAB1                                                                <---------MYB59         --------->YAB1                                                              --------->ARR11(3)       <---------YAB1                           <---------GLK1(2)                  <---------ARR11(3)      --------->AHL20(2)        --------->MYB46(3) <---------ARR11(3)                <---------GLK1(1)    ------>MYB83      ------------------------>ANAC81                        --------->GLK1(1)    ------>MYB46(1) --->TOE2(3)      <---------AHL20(2)              --------->RAP2.6(3)     --------->MYB46(3) --------   aaacaaaataacaaacaaatttaaaccaagattatcgaaatttttggttcaattcggcaagggatatctaactacaaccaaaccaaatttttataatttt  6233700                      --------->ZAT14               --------->ARR14(3)               <---------ARR14(2)     --------->GLK1(1)               <---------GLK1(2)      <---------GLK1(1)                                        ------               <---------ARR14(3)    <---------ARR14(2)                                        ------               <---------ARR11(3)    --------->ARR14(2)    --------->MYB52(1)            <---------ANAC46               --------->ARR11(3)<---------LBD16      --------->AHL20(2)--------->AHL20(2)     ------ ->ICU4      ----------->ARR10 --------->ZAT6 <----------DOF2       <-------TEIL    <---------ICU4  <   gaatttagttaagcgaagattttgttcagtctaactctggatacccttctttcaaattgaataactgaagttcataaattttgtgaacatgacttataag  6233800  Previous    Next  AGI:  At2g14580.1    Description:  ATPRB1 (Arabidopsis thaliana basic pathogenesis-related protein 1). similar to PR1 (PATHOGENESIS-RELATED GENE 1) [Arabidopsis thaliana] (TAIR:AT2G14610.1); similar to pathogenesis related protein 1 [Eutrema wasabi] (GB:BAF03626.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283); contains InterPro domain SCP-like extracellular (InterPro:IPR014044) Range:  from: 6232617    to: 6233306    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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