Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------MYB111(1)                                                    --------->ATHB12                                                    <---------ICU4       <-------GAMYB                               <---------YAB1      --------->MYB52(2)                           --------->ICU4      <---------ANAC58                           --------->YAB1      <---------ANAC58                          --------->ICU4   --------->MYB46(3) ------>TEIL                                    <---------YAB1 --------->MYB52(1) --------CCA1(2)                              --------->YAB1 <---------MYB52(2) ---MYB.PH3(2)               ---------->DOF2 --------->ICU4  <---------MYB46(2)  <-----------GT1   tgaatctttcgttgccctactcaaattcaaacaaagctcaattcagaatgatgatgattactaactaacaaatggtttttgagttacaagtttaaaactt  6050700                                                                                        <---------ICU4                                                                                 <---------YAB1    --                                                                              <------ZmHOX2a(2)    --                 ---------->DOF2                                             --------->ARR11(3)    <-               ------>ZmHOX2a(1)                                             <---------ARR11(3)    <-              --------->TOE1(3)                                           <---------TOE2(3)        --              --------->TOE2(3)                                     <---------TOE1(3)   --------->ATHB12           --------->ARR14(2)                                       <---------TOE2(3)   --------->YAB1           <---------ARR14(2)                                       <---------YAB1     <---------YAB1           --------->ARR11(3)                                   --------->At4g35610    --------->ICU4        --------->CCA1(2)                                     <------ZmHOX2a(1)--------->YAB1    <---       <---------ARR11(3)                                     =======================HOX2a_HOX2a <---       --------->ARR11(3)     ----------->GT1              <---------STY1(1)<------ZmHOX2a(1)   <----     <---------YAB1       <---------AHL20(2)              --------->TOE1(2) --------->YAB1<---------YAB1     <---------TOE2(3)   --------->AHL20(2)           --------->GLK1(1)   <---------TOE1(3)   -------   tcacattaagatatatcctcaaaggcataaaattgtaaaattagactaattcacagaaaccctaggagctaagattaaggatcatgagaatgattagtga  6050800 ----------->HVH21 ------->TGA1a ------->ANAC55(2) --------O2 --------ANAC55(2)                                                              <---------TOE1(3) ------->O2                                                                     <---------YAB1 ------bZIP60(2)                                                                <---------TOE2(3) ------ANAC46               --------->At4g35610       <---------LBD16        <---------YAB1 -------------------TaNAC69(2)                        --------->TOE1(2)<---------YAB1           ----- ---->HVH21                 <---------At4g35610      <---------O2      <---------TOE2(3)   ----------   catgtgaccacaaaatacttataagcttgtagcagagagagagagatagagagagacctgggaataagagattgagattgttatggtttgaaggaaagaa  6050900                                                                                                <----                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                          --------->CCA1(2)                                                                                        --------->CCA1(2)                                                                                   ==================                   ---------->DOF2          <-------TEIL                           ---------->DOF2<--                ------>NtERF2         <------ZmHOX2a(2)                            ==================        --------->ANAC58             --------->ARR11(3)                           <---------AHL20(2)- ---->GLK1(2)  <----------ID1     --------->ANAC58     <-----------GT1            --------->AHL20(2)< >DOF2  --------->ANAC58          --------->ANAC58    ----------->HVH21        --------->YAB1 -------   tcgaacacagaagcaaggggccaaagagaacgatgcaaggatcaagttcatagtatttgacccgtttcagcaatttctcagtaataaaagagacacgcgt  6051000   --------->TOE1(3)   --------->TOE2(3)  <-----------------AGL3  ------>ZmHOX2a(2)  =================================================================================================== <------ZmHOX2a(2) --NtERF2 ------HVH21 ---TGA1a -->TGA1a >ANAC58 >ANAC58 -TGA1a >TGA1a >ANAC46 -ANAC55(2)                                                                                         < >ANAC55(2)                           --------->AtMYB61                                           === -O2                                  <---------ALFIN1             ----------->HVH21              <-- >O2------>ZmHOX2a(1)                --------->MYB46(3)      --------->ARR11(3)             <-------- ===bZIP_DOF     ------>MYB46(1)    >>>>>>>>>>>>>>>>>LFY*TSS <---------ARR11(3)             --------- -------DEAR3(2) ------>MYB83      --------->ANAC46    <-----------GT1   ------->MYC3 <---------HSFB2a(2) =bZIP_DOF  <-----------GT1     <-----------GT1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <-------- -------->ARR14(2)          <---------GLK1(2)       ------->TEIL  xxxxxxxxxxxxxxxx>smallRNA(i)------- ---------ARR14(2)          <---------ARR11(3)      <---------ARR14(2)   <-------MYC3 --------->HSFB2a(2) -->O2  <---------WOX13(1)  --------->ARR11(3)      --------->ARR14(2)<-----------------AGL1---------   cggatccttaattgataccaatcgggtcgagatttttccaccactgtttcaacgtattttcaagataatttgacacgtttaggcatttttagaaaatctt  6051100                                                      <---------ZAT18                                                    <---------TOE2(3)                                                    --------->ANAC46                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                <----------DOF2                                              <---------------AGL15                                              --------------->AGL15                                       <---------ARR11(3) =============MADS_MADS                --------->AHL20(1) ---------AHL20(2)                     <---------AHL20(1) ==============================MADS_MADS   <-----------GT1 -------------AGL15                    --------->ARR11(3) -ARR11(3)                           <---------ARR11(3) >GLK1(2)                            --------->AHL20(1)          <------ZmHOX2a(1) ---ARR10             --------->MYB59<---------AHL20(1)   <----------DOF2 -->TOE2(3)    --------------->AGL15 --------->ARR11(3)   <---------DAG2          <-----------GT1 >ARR11(3)     ===============================================MADS_MADS<-----------GT1   <---------AHL20(2)   atttttttggaaatgttctaatattaggcatttttaaaaaatatttttcgatttaaggcactttataggaaataaacattttttctactatttttttttt  6051200                                                                              ------>ZmHOX2a(1)                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                           <------ZmHOX2a(2)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                          <---------ARR11(3)                                                                          --------->ARR14(2)                                                                          <---------ARR14(2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                     xxxxxxxxxxxxxxxx>smallRNA(i)                                                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                 ------>ZmHOX2a(1)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 =================HOX2a_HOX2a    ----                                                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)-----                                                           <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <----                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <-------         <-----------GT1                              <---------ANAC58  --------->ANAC46<---------AHL20(2)     <---------AHL20(2)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------   <---------RVE1(1)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->AHL20(2)  <---------GLK1(2)--------->AHL20(2)              <----------DOF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ARR11(3)               <---------AHL20(2) <---------ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->ARR11(3)        <---------TOE2(3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->AHL20(2)   cttagatttttttactctcaattcaatatttatgtttttaattctcaatttctctttcttgttattcctcttccacgatccttacccaaaataaataaaa  6051300                                                             xxxxxxxxxxxxxxxx>smallRNA(i)                                                           --------->ANAC46                                                           --------->ANAC58                                                           --------->TGA1a                                                           --------->O2                                                           --------->bZIP60(2)                                                           --------->ANAC58                                                           <---------O2                                                           <---------TGA1a                                                           =======================bZIP_DOF   xxxxxxxxxxxxxxxx>smallRNA(i)               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) >smallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ----->RVE1(1)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         --------->HSFB2a(1) ---->ARR11(3)                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            <---------HSFC1(2) -----ARR11(3)                    --------->ATHB12       <---------ALFIN1         --------->HSFC1(2)x --AHL20(2)                      --------->ICU4    ==================bZIP_DOF     <---------HSFB2a(1) ->AHL20(2)                      <---------YAB1    <----------DOF2     <----------DOF2             xx   tctctctctctctccctctctctctctctctcttcatgatttgtagcgcctctctttctccacgtctccataacttttgagagaagtttcttaaacaatt  6051400                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         ---------->DOF2                   <xxxxxxxxxxxxxxxxsmallRNA(s)                     <------MYB83                        <---------AtMYB61                     <------MYB46(1)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     ----------->GT1                  --------->ALFIN1               <------ZmHOX2a(1)                   <---------AtMYB61            <---------LBD16                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <-----      xxxxxxxxxxxxxxxx>smallRNA(i)          --------->ARR11(3)                                <------   xxxxxxxxxxxxxxxx>smallRNA(i)             <---------ARR11(3)                                ------- ------>ZmHOX2a(2)  --------->MYB59       --------->DAG2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <------ =====================HOX2a_HOX2a        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         ------->GAMYB xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            --------->MYB46(3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxx>smallRNA(s)     ----------->GT1<---------MYB52(2)   cgatctcgattatctcaggaatttggtaaaagttttatgtccataaggtcttggaggtggaggtctctacaaactgtaagaaaaatcaacaaacaatttt  6051500                                                                                                <----                                                                                                xxxxx                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              -------                                     --------->YAB1                                           -------                                   --------->AtLEC2                                          <-------           <-----------GT1  --------->AHL20(1)                                               --------        --------->YAB1      --------->ARR11(3)           <---------YAB1                      <-------        <---------ICU4      <---------ARR11(3)         --------->AHL20(2)                    -------- ----AHL20(2)              --------->AHL20(2)          <---------AHL20(2)          --------->YAB1 ---AHL20(2)           <---------AHL20(2)             --------->AHL20(2)           <---------ICU4 -->AHL20(2)           --------->AHL20(2)           <---------ICU4     <-----------GT1--------->MYB52(1) ---AHL20(1)      <-------TEIL<-----------GT1<----------DOF2 <-------TEIL      <-------TEIL ---------   tttgtgtccataataacgagttcatttaaatatatccattcagaaaacttttactaattaatattcattctatataccaagtccataataacagaagatt  6051600  Previous    Next  AGI:  At2g14260.1    Description:  PIP (proline iminopeptidase); prolyl aminopeptidase. Identical to Proline iminopeptidase (PIP) [Arabidopsis Thaliana] (GB:P93732;GB:Q93Y05;GB:Q9SKJ3); similar to unnamed protein product [Vitis vinifera] (GB:CAO49803.1); contains InterPro domain Peptidase S33, prolyl aminopeptidase; (InterPro:IPR002410); contains InterPro domain Alpha/beta hydrolase; (InterPro:IPR003089); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073); contains InterPro domain Peptidase S33, proline iminopeptidase 1; (InterPro:IPR005944) Range:  from: 6048335    to: 6051056    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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