Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         <---------TOE2(3)                                                                     <-----------RAV1(1)                                                                <------NtERF2                                                            --------->LBD16               ------>NtERF2                                                          =======================RAV     <---------DEAR3(1)                                                          ----------->RAV1(2)      <---------WOX13(1)            --------->YAB1                                <---------LBD16<-------GAMYB  <---------LBD16    ----------->GT1          <---------ICU4              --------->MYB52(1)  <---------ANAC46 --------ALFIN1           --------->YAB1               ----------->HVH21<---------MYB46(3)--------->LBD16   cccacatcgaaaaatcaaaacttttgaataaaaatcacatcgaaatcgatctaagaactcaccggaggcatttgtggttgagtagattgctccggcgaag  5988600                                                         --------->TOE1(3)                                                         --------->TOE2(3)                                                        --------->At4g35610                                                        <---------ANAC55(2)                                                        <---------ANAC46                                                 <---------GLK1(2)                                          <---------ARR11(3)      --------->At5g28300               <         --------->ARR11(3)               --------->ARR11(3)     ----------->GT1                    -         <---------ARR11(3)           ---------->DOF2 <-----------GT1            --------------------   ttgataaccaagagcttcgaagagcgagaaattgtggtctcaaaggtctcagattgttacctgaaaacagtaacaaaaactagcttcgatagtatcgaag  5988700                                                                                             ------>ZmHOX2a(2)                                                                                          --------->ATHB12    --------->ARR11(3)                  <---------HSFB2a(2)                              <---------YAB1    <---------ARR11(3)                  --------->HSFB2a(2)                            --------->YAB1    <---------GLK1(2)                <-----------GT1                                  <---------YAB1    <---------ARR14(2)           <---------RVE1(1)                                    --------->ICU4    --------->ARR14(2)          <---------ARR11(3)                                  --------->YAB1 ---------At4g35610             <---------GLK1(2)                                  <---------YAB1   < -------->At4g35610             --------->ARR11(3)     --------->At4g35610         --------->ICU4   - ->WRI1 <---------YAB1    --------->GLK1(2)         --------->At4g35610      <---------MYB46(3)     -   tctgcagattttgattcgagtacaagagaatcgagatttttaccagaaattcgaagcagcatcgttgttgttgttgttgttgttgatgatgatgatcgga  5988800           <---------At4g35610         <---------ANAC58         <---------ANAC58   <-----------RAV1(1)                                                                              < <------MYB83 <---------At4g35610                                                                   - <---------ANAC46                                                                                  -- <------MYB46(1)<----------DOF2                                                                  <--- <---------ANAC58                                                                       --------->ALFIN1 <---------ANAC58                                                  --------->At4g35610<---------ANAC58 ---------AtMYB61                                                  <---------At4g35610<---------ANAC58 -------->MYB46(2)                                        <---------YAB1             <---------MYB46(3) -------->MYB111(2)<----------DOF2  <----------DOF2       --------->ICU4            ------>ZmHOX2a(2)   gtttggtgttgtcgtctgcttctttgtataagcgtctccttttggttttggatttgagtgatgagtgaatgctgactcgatgttgatcgggtgcgaatga  5988900                          <---------------AtSPL3                        --------->ARR14(2)                 --------->ALFIN1                ------->MYC4                ------->PIF5                <-------MYC4                <-------PIF5                <-------MYC3                ------->MYC3               --------->O2               <---------O2               --------->TGA1a               <---------TGA1a               ==========================MYC_MYB               <---------ANAC46        <------ZmHOX2a(2)               <---------PIF3(3)      --------->ARR11(3)              ------>NtERF2           --------->AGP1       <---------GLK1(1)<---------ARR14(2)    <------MYB46(1)   <---------MYB46(3)------>ZmHOX2a(2)    <------MYB83<-------MYC2      <---------MYB52(1)   --------->GLK1(2)  <--------P <---------ALFIN1 <---------At5g28300<-------TEIL                                      <-  =======================MYC_MYB <-----------HVH21    <---------GLK1(2)                      <-------TEIL ---------MYB46(3)<---------DEAR3(1)  <---------ARR11(3)                              --------->CCA1(2) -------->MYB55(2)<---------MYB46(3)  <---------AGP1  <---------ARR11(3)             --------->ARR11(3) ------->ALFIN1--------->PIF3(3) <-------GAMYB  --------->CCA1(2)                    <---------ARR11(3) ------bZIP60(2)------->MYC2  ------->TEIL  --------->YAB1<----------DOF2  --------->AtMYB61 ------->TEIL   agtggttggatttcgccacgtgggtggatatgtaccgttagatctataagattcaagattcttttgtttgactctcaccatcaccaagatatatgtacat  5989000                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                            ---------                          --------->TOE1(3)                                                 ---------                          --------->TOE2(3)                                                <---------YAB1                  <---------CCA1(1)                           <----------DOF2     --------->ARR14(2)                  <---------RVE1(1)                        --------->ARR11(3)     <---------ARR11(3)                 <---------AHL20(1)            --------->ANAC58                   <---------ARR14(2)                 <---------ARR11(3)            --------->ANAC58     <-----------RAV1(1) <---------AHL20(2)                 --------->ARR11(3)          ---------->DOF2 <-----------------AGL3     --------->AHL20(2)             ---------->DOF2  ------------>CBF --------->ANAC46 <-----------TBP   <---------ARR11(1)< --------WOX13(1)--------->AHL20(1)--------->YAB1          <---------ARR11(3)    <---------CCA1(2) --   ggttgacaaaaaaaaaaaagatatttagccttaacaattttaaaactaaaagcaagtccaagagctttttatggggctcttccaaatcttttaattataa  5989100                                                                                               ------                                                                                              -------                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                                                         --------->YAB1                                                                                        <---------YAB1                                                                                     <---------YAB1                                                                                   --------->YAB1                                                                                   <---------ICU4                                                                                   -------->ATHB1                                                                                  --------->AHL20(2)                                                                                  <---------YAB1                                                                               <---------AHL20(2) --->AHL20(2)                              <---------AHL20(2)                  --------->AHL20(1) ----AHL20(2)                             --------->AHL20(2)         <----------DOF2 --------->ICU4 ---YAB1                                  <---------AHL20(2)     --------->ZAT18  <---------AHL20(2) >YAB1                                <---------AHL20(2)         <---------ZAT18  --------->ICU4 >AHL20(2)     --------->AHL20(2) ----------->GT1               --------->ALFIN1  --------->AHL20(1) ---------AHL20(2)              <---------GLK1(2)            --------->DAG2    --------->AHL20(2) <-- ------->AHL20(2)               <------------CBF            ---------->DOF2   --------->AHL20(2) ----   attttatcaaattcaaatttaagagttttggatagattgttaaattttttttgtctaatgaaaaaagtgggcttttaaaaaaaaattattattaaaataa  5989200           <---------AHL20(1)        --------->AHL20(2)        --------->AHL20(1)        <---------AHL20(1)       <---------AHL20(2)                                    <---------ANAC55(2)   <---------YAB1                           --------->ANAC46 --------->ANAC55(2)   ----------->TBP                       --------->ARR14(2) <-------TEIL --------->YAB1                          <---------ARR14(2)--------->CCA1(2) --------->AHL20(2)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                   ------- --->YAB1  --------->AHL20(2)    <---------ICU4        <---------TOE2(3)               --------->ANAC58 -->AHL20(2)                     --------->ATHB12     ---------->DOF2                  --------->ANAC46 -------ICU4    <---------AHL20(2)<------------CBF --------->YAB1     ---------->DOF2  --------->ANAC58 ----->ICU4<---------AHL20(2)   <---------YAB1------------>CBF ----------->HVH21 --------->AHL20(2)   aaattataaatattttattttataaaactgaatagttattgcaaatacaccaattttaaagatacatgacataaaagcatatataaaatacgaaaatcga  5989300                                  >>>>>>>>>E2Fd                                  >>>>>>>>>E2Fc                                 --------->LBD16                                 ------>NtERF2                      <---------At4g35610                                                        ----                      --------->At4g35610                                                        ----             --------->AHL20(2) --------->ANAC58                                              <------ZmHOX2a(2)             <---------AHL20(2) --------->ANAC46                                             <-------         --------->ICU4         --------->ANAC58                                             --------        <---------TOE2(3)       <<<<<<<<<<E2Fa                       <----------DOF2        ---------       --------->MYB52(1)      <---------LBD16                ------>MYB83                  <-------- --------->YAB1    <---------MYB52(1)                       <---------MYB59                 --------- ---->GT1<---------YAB1--------->TOE2(3)   <---------MYB46(3) ------>MYB46(1)           xxxxxxxxxxxxx   aaatcagaataacgattaattgttagcttaattcccgccaaatgtttgttatatatgcttaaccaaattagctttcaattgtggatgtatagccagatca  5989400                                            <---------ARR14(2)                                 <-----                                            <---------ARR11(1)                                 <-----   <---------LBD16   <---------AHL20(2)     <---------ARR11(3)                             <---------ANAC58  <xxxxxxxxxxxxxxxxsmallRNA(s)----------->ARR10----------->GT1                             <-------GAMYB ----->ANAC58       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  <---------ANAC58 ----->ANAC58       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                  <---------MYB46(3) --ARR11(3)         --------->YAB1          --------->ARR14(2)                           <---------YAB1 ->ARR11(3)    ------>NtERF2 ------>NtERF2 <---------GLK1(1)                      <---------WOX13(1) >At4g35610   --------->RAP2.6(2)          --------->GLK1(1)                      <--------P   ------ -At4g35610 <---------At4g35610      ---------->DOF2                    ---------->DOF2  <---------TOE2(3) >bZIP60(2) --------->At4g35610  --------->CCA1(2)           <---------GLK1(1)   <-------GAMYB <----- xxxxxxx>smallRNA(le3)      --------->LBD16<---------CCA1(2) --------->GLK1(1)  <---------MYB46(3)   cgaactcgggctcgagcggccataatattgccgagatttgaaagcatatctgtaaaatagttgaaatccatttgtaaagagctggttgattttggttgtg  5989500  Previous    Next  AGI:  At2g14170.1    Description:  ALDH6B2 (Aldehyde dehydrogenase 6B2); 3-chloroallyl aldehyde dehydrogenase. Identical to Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial precursor (ALDH6B2) [Arabidopsis Thaliana] (GB:Q0WM29;GB:Q9SI43); similar to ALDH2C4 (REDUCED EPIDERMAL FLUORESCENCE1), 3-chloroallyl aldehyde dehydrogenase/ aldehyde dehydrogenase (NAD) [Arabidopsis thaliana] (TAIR:AT3G24503.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67866.1); similar to unknown [Populus trichocarpa] (GB:ABK95002.1); similar to Aldehyde dehydrogenase [Medicago truncatula] (GB:ABD28558.2); contains InterPro domain Methylmalonate-semialdehyde dehydrog Range:  from: 5984438    to: 5988981    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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