Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           --------->ANAC58                                                                                         --------->ANAC58                                                                                     <-----------GT1                                      <---------MYB52(1)                       --------->ARR11(3)                                     <-------GAMYB                             <---------ARR11(3)                                  <---------At5g28300                         --------->YAB1 <---------ZAT6                   <---------DOF5.7(2)                        <---------YAB1 --ZAT14                        --------->DOF5.7(2)                          <---------TOE2(3)------- ->ZAT18                       <----------DOF2                           --------->YAB1  --------->ANAC46 ->ZAT14        --------->YAB1<---------ANAC58                           --------->TOE1(3)    ------- --ZAT18--------->ALFIN1      <---------ANAC58           --------->YAB1  --------->TOE2(3)  ---------   ttagtgttaagtggcgaaacatcatcgaattggcgttaccgttgtgatgcacaatctaatcagagcaatagctaatcttaagataattcaccagcaaagc  5797800                    <---------YAB1                    ------>ZmHOX2a(1)                  ----------->RAV1(2)             ==============HOX2a_HOX2a             ------>ZmHOX2a(2)            ===============HOX2a_HOX2a            <------ZmHOX2a(2)           --------->ARR14(3)           <-----------ARR10           <---------ARR14(3)           <---------GLK1(2)           --------->ARR11(3)           <---------ARR14(2)                      ------->GAMYB           <---------ARR11(3)       <---------AHL20(2)           --------->ARR14(2)      --------->AHL20(2)     <---------YAB1       <----------DOF2      <-----------HVH21         --------->TOE2(3)  >>>>>>>>>>>>>>>>>LFY    <---------ALFIN1 -->ANAC58 --------->AGP1<-----------GT1        <-----------GT1           --------->ANAC46 -->ANAC58<---------CCA1(2)     --------->TOE1(3)-------->P               --------->ANAC58 ->DOF2  ----------->ARR10   --------->ANAC46 <---------MYB52(2)          --------->ANAC58   aaaacccagttcagatcttctcctgattcacaaaccataaaatttgaaactaaccccattgttataagccctctccacgacctttgaaggtgatagaaac  5797900                                                                                       --------->At4g35610                                                                                ---------->DOF2                                                                              <------NtERF2  <------ZmHOX2a(1)                                --------->YAB1                               ------>NtERF2--------->At4g35610                         --------->At4g35610                                <---------ATERF1(2)                         <---------At4g35610  <---------ALFIN1              --------->ATERF1(2)                --------->YAB1  --------->ANAC46 <---------ARR11(3)  <---------TOE2(3) <---------At4g35610     ------>NtERF2      ------->TEIL  <----------DOF2  --------->HSFB2a(2) --------->RAP2.6(3)     <-   ccatcgctgcgatttgaatgagaatgaagctcaaacacaactttctctccacatcttagagaaccagaattgatgttgacggcaaagtcatcagaggaag  5798000                  --------->TOE1(2)           ---------->DOF2                          --------->ZAT6                  --------->TOE2(2)    <---------WOX13(1) <---------WOX13(1)        <-----------GT1                  --------->TOE2(3)  <---------MYB46(3) --------->ATHB12      ------>ZmHOX2a(1)     --------->CCA1(2)               --------->ATHB12  <---------YAB1   --------->At4g35610 -----ZmHOX2a(1)------->TEIL    <---------ATHB12     <---------At4g35610<---------At4g35610   aggagagagatggagaagaacctaagatgagccaatcggtgattgacttaaaggcttctgattgctcagtggtcatcttcctcttgttaccagtactacg  5798100                           <-----------TGA1                                                         <                           <-----------HVH21                                                      <--              <---------At4g35610                                                               <----  <<<<<<<<<TBF1 <----------DOF2     <-----------RAV1(1)   ----------->GT1 <------ZmHOX2a(1)----------   cttcttcttcttgttccgcttcttcttatcgtcagccattgttggagattgtgagggaagaggtatcaaatttggaggatgagtttttgaggtctgaccg  5798200                                                                                     ---------->DOF2       ----------->HVH21                                                           --------->MYB46(3)    --------->DAG2                                     <------------CBF          ----------->RAV1(1) ------NtERF2            ----------->GT1             <---------YAB1         ------>MYB83 -------DEAR3(1)     ---------->DOF2           <---------AHL20(2)           --------->ANAC58 -------HVH21     --------->ANAC58             --------->AHL20(2)           --------->ANAC58 ->HVH21*TSS      --------->ANAC58       ----------->GT1                    ------>MYB46(1)   tcggagaaggtgacagtgagacgaaaagagtagaaatttgaaatggtttttaatttctattgggcctgaaaacaaaccaagcccaacaaaagaaaatttt  5798300                                                                      --------->YAB1                                                                   --------->YAB1                                                                  <---------AHL20(2)      --------->YAB1                                             --------->AHL20(2)      <---------ICU4                                             <---------AHL20(2)               <--     <---------YAB1                                          <---------DAG2                  <-------   --------->YAB1                                         <-----------GT1                <----------DOF2  --------->ICU4         --------->TOE2(3)<---------AHL20(2) <----------DOF2   <----------DOF2-------   ggcgataatcataactagaaacaatagcctaaatatgtgttgatttttttaaaaacaaattcacttttttaataacaaatgctttctctctcttttttct  5798400         <-------GAMYB                                               ----------->RAV1(1)       --------->MYB59                                            ----------->RAV1(1)           ----- --------DOF2                     ----------->HVH21        <---------ANAC58                --------->ANAC55(2) ----GT1<------MYB83 <---------AtLEC2                      <---------ANAC46            <----------DOF2 --->ID1<------MYB46(1)   <----------DOF2--------->YAB1    <---------ANAC58    --------->ICU4   <----   ctttaaaatttggttgtatttctgcatgcttttattctgacactgatactctacctatttggcttgagcaacaacattgtaatgactctctttaagtaat  5798500                  ----------->GT1                  <----------ID1                ---------->DOF2            <------NtERF2           --------->HSFB2a(2)           <---------HSFB2a(2)          <---------ANAC46       --------->MYB52(2)                                                                     <------       <---------MYB46(3)                                                                     -------  <---------TOE2(3)                                                                   <---------CCA1(2) --------->MYB52(1)                             <-----------GT1                     <---------ANAC58 ---->ICU4--------->ETT(1)             ---------->DOF2                              <---------ANAC58 -----YAB1<---------LBD16          --------->YAB1         --------->AtLEC2     <-----------RAV1(1)   gaataacgtttgtcgggaaaaagaaaaattcagacaatagtaaaagtttatttcccttcgatgcacagtccgaatgttattttggtgcttatctttcccc  5798600                                                <--------P   ----------->GT1                   ------                                               <-------GAMYB <------MYB83                   ------->GAMYB                                              --------->ATHB12                              <--------                                  <----------DOF2            <------MYB46(1)             <---------DOF5.7(2)                                 ------>ZmHOX2a(2)          --------->MYB59             --------->WRKY38(1)                                <------ZmHOX2a(2) <------MYB46(1)                       --------->WRKY12                               <---------ARR11(3) <------MYB83                       <---------ANAC46      ----------->GT1          --------->ARR11(3)<---------DEAR3(1)               --------->ANAC46 ---------AGL15       --------->At4g35610     <---------MYB46(3)                --------->MYB52(1) -------->AGL15       --------->GLK1(1)      <---------AtMYB61         ----------->GT1 --------->DOF5.7(2)   atttagtcgggtttatcatctagcatctccagcgatctttagtggagatggttggctcatgttcggtaacatcgggtttaataaacggcgttaaccgaat  5798700  Previous    Next  AGI:  At2g13840.1    Description:  PHP domain-containing protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO49685.1); contains InterPro domain PHP, C-terminal; (InterPro:IPR004013); contains InterPro domain Polymerase and histidinol phosphatase, N-terminal; (InterPro:IPR003141); contains InterPro domain Polymerase and histidinol phosphatase-like; (InterPro:IPR016195); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 5795634    to: 5798208    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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