Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->LBD16                                       ------>ZmHOX2a(2)                                      --------->GLK1(1)                                      <---------GLK1(1)                                      <------ZmHOX2a(2)                                     <-----------ARR10                                     <---------ARR14(2)                                     --------->ARR14(2)                                     --------->ARR14(3)                                     <---------ARR14(3)                                     --------->ARR11(3)                                    <------ZmHOX2a(1)                                 <------ZmHOX2a(1)                                                  <                              <-----------RAV1(2)   --------->ARR14(2)      --------->At4g35610     -                          --------->At4g35610      <---------GLK1(2)        <---------At4g35610    --                  <-----------RAV1(2)<---------ARR11(3)                  ---------->DOF2    ---------                  <---------LBD16=============HOX2a_HOX2a ----------->RAV1(1)          ---------->DOF2   taagtatgaaataacacataccaggggcagtagcaggaggatctccagagacagaaactgcaacacaacaatttcaaaagctgattcaacaaagtgaaca  5783000                                                  --------->At4g35610                                                ------->GAMYB                                          --------->RAP2.6(2)                                     --------->SPL7                   <----------DOF2 ---------AHL20(1)                   <---------At5g28300    <------ZmHOX2a(1) -------->AHL20(1)                  --------->MYB52(1)    --------->ALFIN1 ------->AHL20(2)          ---------->DOF2----------->RAV1(1) --------->At4g35610                <--- >ZAT18                <---------YAB1--------->RAP2.6(3) <------ZmHOX2a(1)                     ------   aatatataaaaccaatatgaaatttctgataaagaaacttacggccacaacgagcagaaggaggagcagcaactttacaaacagaaggaagagaagcagc  5783100       <------ZmHOX2a(2)      <---------ARR11(3)                                                   ------->GAMYB      --------->ARR11(3)                                               ------>ZmHOX2a(1)  ---------->DOF2                       ---------->DOF2               <---------MYB59 -------DOF2----------->GT1  <---------ALFIN1                     ------>ZmHOX2a(1) --->At4g35610              --------->MYB46(3)           --------->GLK1(2)--------->MYB46(3)   tttagaaagatcaagagttaaaccaagagaaccactgttcttgaaagcctcacatagacattctggtcctgtcctaaccacagtcttaagccctgaacaa  5783200                                                                                                <----                     --------->ZAT18                                                   --------->ZAT2                   --------------->AtSPL3                                              <---------ZAT2             ----------->HVH21                                                         --------->At4g35610           <---------ANAC58                      --------->WOX13(1)                    <---------At4g35610           <---------ANAC58                   --------->ANAC58                        <-----------RAV1(1)         ------>NtERF2                   --------->ANAC58                           <---------At4g35610         --------->LBD16                 <----------ID1                           <---------ZAT14       --------->RAP2.6(3)               --------->ANAC58                         <---------ZAT18       <---------LBD16      --------->ZAT6    --------->ANAC58                    --------->ZAT14    <---------ANAC58 --------->ZAT14   --------->MYB52(1) --------->ICU4          --------->ZAT18    <---------ANAC58 <---------ZAT14 <---------MYB52(2) --------------->AGL15--------->At4g35610-----   catgttccttccggcttgacaactgtactaccactagtcacaaacgacaaacaatcagccatgtttagtatcaacgatgagcagtccactgctgcatgag  5783300                                    <---------YAB1                                <---------ARR11(3)                                --------->ARR11(3)                              ----------->ARR10                          <---------HSFB2a(2)               <---------YAB1                      <---------ALFIN1             ------->MYC3                      --------->AtMYB61            ------->MYC2                     <---------ABI4(2)             <-------MYC2       --------->LBD16--------->DEAR3(1)           <-------MYC3    <---------YAB1 <---------ZAT18      --------->DEAR3(1)  --------->HSFB2a(2)   <---------ANAC58 --------->ATHB12 --------->ZAT14     <---------LBD16 <---------MYB55(2)         <---------ANAC58 --------->YAB1   --------->ZAT18 -----At4g35610      --------->MYB46(3)         <---------ANAC46--------->ICU4<-----------RAV1(1)   - ---->At4g35610     ------>NtERF2<------ZmHOX2a(2)<---------At4g35610  *TSS<----------DOF2          <   ctctctcgccggacattagtgccaccaccgagaagatcatgagaatagttgcatatgccattgtgaatgatgagtctcttttggtgctctctagcatgct  5783400                                    <---------AHL20(2)                              <------------CBF                         <---------YAB1                      <---------AHL20(1)                                         <----------DOF2              <----------DOF2--------->ATHB51                              --------->YAB1             <---------DAG2 <---------YAB1<-----------TBP                  <--------HAHB4        <------------CBF --------->AHL20(2)                                -------->ATHB1        <---------GLK1(1)<---------AHL20(2)                                <---------ICU4 <---------AHL20(2)   --------->AHL20(2)  --------------------->WRI1       --------->ATHB12 -------->AHL20(2)    --------->AHL20(1)--------->AHL20(2)                <---------ATHB12 ---------AHL20(2)   <---------CCA1(2)  <---------AHL20(2)---------->DOF2------->TEIL      ----------   aaataaatggaattgcctttttcatatattattattgtttatttttttatatttttcgccgaaagagaagacatgaatcattactttctcagtgtgtaaa  5783500                 <---------YAB1                --------->AHL20(1)               <------MYB46(1)                <---------AHL20(1)               <------MYB83               --------->AHL20(2)                ----------->GT1               <---------AHL20(2)              <---------WOX13(1)                        <---------KAN4(2)           --------->AHL20(2)                 --------->ARR14(2)                <---------YAB1           <---------AHL20(1)                 <---------ARR14(2)              --------->AHL20(2)           <---------AHL20(2)                 <---------GLK1(2)               <---------AHL20(2) <----------DOF2<---------AHL20(2)         <---------HSFB2a(2)            --------->AHL20(2) <---------DAG2--------->YAB1              --------->HSFB2a(2)            <---------AHL20(2) ->GT1     --------->AHL20(1)      <---------MYB46(3)                    <---------AHL20(2)   atgctttatggaataaattatatttgtctaaaatcggtcgttcttccagattggtagaatatttctatgaacaaaattatttatatttgagaataaactg  5783600                                                     <---------TOE2(3)                                                  <---------YAB1                                                  <---------AHL20(2)                               --                                       --------->MYB52(1)                                         ---                                     <---------MYB52(2) ----------->GT1      --------->YAB1       ---                               --------->TOE2(3) --------->YAB1 ----------->GT1     <---------KAN4(2)            <-----------HVH21 ----------->GT1    --------->TOE2(3)          <---------YAB1       <---   aaatttcaaatttttgtcaagggaaaactgaaatgttaaactaacatctaatattaatgtgttaaatggtaagataacatcataagaatatacaaaataa  5783700                                                                                 --------->AHL20(2)                                                                                 <---------AHL20(2)                                                                                 <---------ICU4                                                                           --------->ANAC55(2)                                                                         <-----------GT1                                                                    --------->YAB1                                                                    <---------AHL20(1)                            <-----------GT1                         <--------ATHB1   <---------AHL20(2)           <---------AHL20(2)                                       --------->ATHB51--------->AHL20(2)           --------->AHL20(1) --------->ANAC55(2)                   <---------ICU4  <---------AHL20(2)           --------->AHL20(2) <---------ANAC55(2)                   --------->AHL20(2)      <---------AHL20(2)    --------->AHL20(2)                     --------->ICU4--------->ATHB51      --------->AHL20(2) --------->YAB1                            <---------ATHB12 <---------AHL20(1)     --------->AHL20(2)  <---------ICU4                            <---------ATHB51 --------->AHL20(1) ------->TOE2(3)        <---------AHL20(2)                    ------>ZmHOX2a(2)  <--------ATHB1 -------->GT1           --------->AHL20(2)                   <------ZmHOX2a(2)  <---------YAB1 ------>ANAC46        --------->TOE2(3)                     <---------ARR11(3)  --------->ICU4 ------TOE2(3) --------->AHL20(2)      ---------->ID1       --------->ARR11(3)--------->YAB1   acgtaaattaaaataaaataaaaacattaattacatattttgttgtatacaaacaaatattagatcccaataattttacataataatttatttcagtcgt  5783800                                                                      <---------AHL20(2)                                                                     <---------AHL20(2)                                                                     --------->AHL20(1)                                                                     --------->AHL20(2)                                                                     <---------AHL20(1)                                                            <-------MYC3                                                         <---------ANAC58                                                         <---------ANAC58 <---------AHL20(2)                  <---------ARR14(2)                  <---------WOX13(1) --------->AHL20(2)                  <---------GLK1(2)          <---------MYB52(1)     <---------AHL20(2)              <---------ZAT18               --------->TOE2(3)    --------->AHL20(2)              <---------LBD16              --------->ANAC55(2)----------->GT1      <---------ALFIN1                    <---------TOE2(3) ------->MYC3 <---------AHL20(2)     --------->LBD16                     <-----------GT1 <---------ANAC46<---------AHL20(1)   --------->ANAC46               <---------ZAT6    --------->ATHB12--------->AHL20(2)   <---------LBD16--------->ARR14(2)<---------YAB1 <---------YAB1<---------AHL20(2)       <-------TEIL   tttatcccgcacatagtgcggattcttatctagttagtattatttacgttattttgattgcatgtgataaattaatttttttgtagtataggttcatatt  5783900  Previous    Next  AGI:  At2g13820.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. Identical to Non-specific lipid-transfer protein-like protein At2g13820 precursor [Arabidopsis Thaliana] (GB:Q9ZQI8;GB:Q3EC14;GB:Q84WL8); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G64080.1); similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT5G64080.2); similar to xylogen protein 1 [Zinnia elegans] (GB:BAD24657.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR Range:  from: 5781228    to: 5783371    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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