Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->AHL20(2)            <---------AHL20(2)                             --------->GLK1(2)            <---------AHL20(2) --------->YAB1                                            --------->ARR14(2)        <---------AHL20(2)    --------->AHL20(2)                                         ------->TEIL        --------->AHL20(2)<---------AHL20(2)                            --------->AHL20(2)      --------->YAB1      --------->AHL20(2)                   ----------->GT1           <---------ARR14(2) -------MYB59          --------->YAB1  ------->TEIL        --------->ARR11(3) <-----------GT1 --->AHL20(2)    <-----------GT1<---------AHL20(2)   --------->YAB1     <---------AHL20(2)   tctaactaaaataaatatttaacaagaataaaataaaaatgtattttttctactacaataacatctagtaaaatataaattcacaatttcgaatctgaaa  5760000                ----------->GT1          <---------YAB1        <---------ICU4        <--------HAHB4        --------->ATHB51        -------->HAHB4        --------->YAB1        <---------AHL20(2)        -------->ATHB1                  --------->YAB1       --------->ICU4          <---------ZAT6       <---------YAB1   --------->AHL20(1)                    <----------DOF2       <---------ATHB51 <---------AHL20(1)               <---------MYB59           ---------->DOF2     --------->YAB1     <---------AHL20(2)             -------->P              --------->TOE2(3)  ---    <---------AHL20(2)  --------->AHL20(2)    ---------->DOF2 <---------DAG2   <----------DOF2 ------    --------->AHL20(2) --------->AHL20(2)     <---------AHL20(2) <---------HSFB2a(2)           <-----  --------->TOE2(3)    <---------AHL20(2)     --------->AHL20(2) --------->HSFB2a(2)      <---------TOE2(3)   aaaacattaattattatctagtaaaataaattagtcttacagtcacaataaatcacttacctcacttttagaaaaatagaactttaaaagttgagataag  5760100                                            <---------RVE1(1)                                           --------->ARR14(2)                                           <---------ARR11(3)                                         --------->LBD16                                       <---------LBD16                                      <------ZmHOX2a(2)                                     <---------ARR14(2)                                     --------->ARR14(2)                                  <---------HSFB2a(2)                                  --------->HSFB2a(2)                                 <---------LBD16                           ==========================================================================                           <-----------------AGL3           --------->ZAT2  <---------MYB59 <---------ARR14(2) <---------ANAC58           <---------ZAT2 --------->ANAC46 <-----------ARR10  <---------ANAC58 ------>GLK1(2)           <-----------------AGL1    --------->At4g35610 <---------AtLEC2 --->ANAC55(2)          <-----------GT1------>ZmHOX2a(2)   <----------DOF2    --------->At4g35610 ----ANAC55(2)   ------>NtERF2 --------->GLK1(2)  --------->YAB1<---------MYB52(1)   tatctaatggcccagcctcggcccatttacccaattctggatccggatattatcagcatcactttcgtttttttgcaagtagcagagcattctccatgtt  5760200                                ---------->DOF2                               <---------WRKY45                               <---------WRKY12                               <---------WRKY38(1)                              <<<<<<<<<<WRKY40                              <<<<<<<<<<WRKY62                              <<<<<<<<<<WRKY18                              --------->WRKY18(1)                     <---------------AGL15                     --------------->AGL15                    ----------------->AGL2                    ----------------->AGL1  <---------ANAC58                           --------->ATHB12                    ----------------->AG    <---------ANAC46                           <---------WRKY18(1)                    <-----------------AGL1  <---------ANAC55(2)       --------->YAB1  --------->WRKY38(1)                    ----------------->AGL3  <---------ANAC55(1)       ----------->GT1 --------->WRKY12                    <-----------------AG    <---------ANAC58      <---------WRKY38(1)<---------WOX13(1)       ---------->DOF2       <-----------HVH21         <---------ANAC58             <------------CBF  --------->GLK1(1) <-----------------AGL2<---------DOF5.7(2)    ------------>CBF  --------->ATHB12 ====================================MADS_MADS         <---------ANAC58           <-------TEIL   tgagaaacccaaagttccaaattccaaaattggtcaaagctcgataacgtgtgtattgcttctcttagtcaatggtgatttcgattcattgactgggttt  5760300                                                                              <----------DOF2                                                                             <-----------------AGL3                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                         --------->LBD16                      --------->YAB1                                    <---------O2              ------------>CBF         <---------ZAT6                   <---------ANAC58       <---------ANAC58          <----------DOF2                        --------->O2  <---------At4g35610       <---------ANAC58         <---------ANAC58                        <---------ANAC58      --------->STY1(2)         <---------ANAC58     *TSS               <---------ANAC46            -      <---------STY1(2)     <----------DOF2     ----------->GT1   <------ZmHOX2a(2)  XXXXXXXXXXXXXXXX   aaaaaccttgctagttctcaattctcatgactttgcttttagtcttagaagtggaaaatggaacatggatcatcccgtggctttatttggctgattctat  5760400                       --------->LBD16                     --------->At4g35610                     <---------LBD16                    --------->MYB52(1)                 <-----------HVH21              --------->LBD16             <---------HSFB2a(2)                  --------->ATHB12 -------->HSFB2a(2)<---------WRKY38(1)        <<<<<<<<<TBF1                            <----------DOF2 XXX>MIR3434 --------->HSFB2a(2)         <----------DOF2                     ---------->DOF2   ttctcgattttgtttccagagtcaccggaaaaacacaaggtttctttcttcttcatttgaattttctcattcgggtttcaaaagagagacttttttttgt  5760500                     <---------DAG2                         <----------DOF2                     <----------DOF2                    --------->MYB46(3)                 --------->MYB46(3)                --------->ANAC46     <---------At5g28300 ---------               ----------->RAV1(1)              ---------->DOF2        <-----------GT1      <--------            --------->ANAC46                <---------TOE2(3)   ---------->ID1       <---------YAB1         ---------->DOF2           ------>ZmHOX2a(2)  ----------->RAV1(1)  <---------At4g35610   ttgcaattttgtaaaggcaacaactttattcccttgatcccttgttgatgtaaaggcaacaactttgttttttttacagttgatgctctcattgctctaa  5760600                                                          --------->ANAC58                                                          --------->ANAC46                                <---------ARR11(3)        <---------ANAC55(2)                                --------->ARR14(2)        --------->ANAC55(2)                ----------->HVH21                         <---------TGA1a                --------->WRKY38(1)                       --------->ANAC58              <---------At4g35610                         --------->ANAC55(1)              <---------ANAC55(2)         <---------ZAT2  --------->TGA1a            <-----------RAV1(2) <---------ARR14(2)        <---------O2                        -------         --------->YAB1   --------->ANAC46--------->ZAT2  --------->O2 <-------TEIL    <---------ANAC58        <---------YAB1--------->AtLEC2 =============================bZIP_DOF           <---------ANAC58 ------>AGL15 --------->ANAC55(2)      ---------->DOF2  <-------------DYT1             <---------ANAC46 -------AGL15 --------->At4g35610  --------->ANAC46   <---------MYB52(2)              --------->MYB52(2)   gaagcagtttatcatcaggtgaccatacaaacaatatactccaaagctggaatgccactcacgttactccatgttcatggtttcatgttacttgcaatac  5760700                                                                                        <---------LBD16                                                                                       <---------O2                                                                                       <---------ANAC46                                                                                       <---------bZIP60(2)                                                                                       <---------ZAT2                                                                              <---------ZAT14   <----                                                                           <---------At5g28300<------                                                     <-----------GT1      <-----------GT1 <---------LBD16                                                    <---------YAB1     <----------DOF2 ----------->RAV1(2)                                          --------->ZAT2               ==========================bZIP_DOF                   <---------MYB52(1)     <---------ZAT2   <---------WOX13(1) <---------At4g35610         <-----------GT1                 <-----------RAV1(1)       --------->ANAC58    <---------TGA1a      <---------ZAT6       <----------DOF2--------->At4g35610      --------->ANAC58 ----------->HVH21 -->ICU4----------------------->TaNAC69(2)<---------At4g35610--------->ATHB12 --------->ZAT14 <------   tgaaaacagtgttactcgtctgtaagtttctttcactctctctctgctggttttataactgaatgattcaagccttttactgctcagtgacctggggagt  5760800                          --------->At4g35610                          --------->ZAT2                          <---------ZAT2                          <---------At4g35610   --------------->AtSPL3                      ---------                        <---------ALFIN1        --------------->AtSPL8                      ------->TEIL                      ----------->RAV1(1)  --------->ARR14(2)                            <---------ANAC55(2)                      <---------ALFIN1     <---------ARR14(2)                            --------->ANAC55(2) --------->GLK1(2)   <------NtERF2 <---------ZAT2                              <---------WOX13(1) -----ZAT6          ------>NtERF2  <---------At4g35610                       --------->ATHB12       - ---ANAC58   <---------ARR14(2)    --------->At4g35610                      <---------YAB1 <---------CCA1(2) ---ANAC58   --------->ARR14(2)    --------->ZAT2               --------->REM1(1)     --------->ICU4<   gctaatctatctggagaactggtgccacagcttgctcagcttccaaatttgcagtacttgtatgcttcatcttattttctgattgctaattatgtatctt  5760900  Previous    Next  AGI:  At2g13800.1    Description:  ATSERK5 (SOMATIC EMBRYOGENESIS RECEPTOR LIKE KINASE 5); ATP binding / protein kinase/ transmembrane receptor protein serine/threonine kinase. similar to SERK2 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2), kinase [Arabidopsis thaliana] (TAIR:AT1G34210.1); similar to BAK1 (BRI1-ASSOCIATED RECEPTOR KINASE), kinase [Arabidopsis thaliana] (TAIR:AT4G33430.1); similar to ATSERK4 (SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 4), protein binding / protein kinase/ transmembrane receptor protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT2G13790.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65708.1); similar to somatic embryoge Range:  from: 5760353    to: 5764321    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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