Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <-------GAMYB                                            <---------DEAR3(2)                                        ------>ZmHOX2a(1)                                       <---------ANAC58                                       <---------ANAC58                               <----------DOF2 ---------MYB46(3)            <---------ANAC58 --------YAB1             <---------ANAC58  <---------MYB46(3) --------WOX13(1)         <---------ANAC58 <---------ANAC46 -----YAB1            <------MYB46(1) ----------->RAV1(2)                  ---------->ID1          <- ---ANAC58            <------MYB83<---------ANAC58           --------->ARR11(3)                    == ---ANAC58       --------->ATHB12 <---------ANAC58           <---------ARR11(3)          <---------YAB1 ---ANAC46      <---------YAB1<---------ANAC58           ---------->DOF2 <-----------RAV1(1)       <-   gattgttgtctctctagtatcatttggttcttgctttcgttcctggcggtttgacttcagaaagatgtcttaattttgtggcattaccagtcttattgct  5656600             --------->HSFB2a(2)             <---------HSFB2a(2)          <----------DOF2    <-------MYC2    ------->MYC2    <-------MYC3    ------->MYC3   <---------ANAC46   ==================bZIP_DOF   <---------ANAC55(2)   <---------O2                                                <---------AtMYB61   --------->TGA1a  --------->TOE2(3)                        <----------DOF2   --------->O2   --------->ARR11(3)                --------->ZAT2                   <---------ANAC46   <---------TGA1a<---------ARR11(3)                <---------At4g35610              <---------ANAC58   --------->ANAC55(2)          --------->TOE2(3)   <---------ZAT2                   <---------ANAC58 ---------DOF2   <---------GLK1(1)                  --------->At4g35610        <----------DOF2    --- ============bZIP_DOF    <---------ZAT6           <---------WRKY12      <---------CCA1(2)   --------- ----------HVH21 --------->GLK1(1)              <-----------HVH21 <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   gcttcacgtgttcttttggaaatcttagtgagaacctctatggaacaataggtcagcttagtgctttggtctccatctcttctttttgcgagtttatctt  5656700                                                                                               <-----                                                                                              -------                                                                                              ------>NtERF2                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------         <----------DOF2                                                                    ---------        <---------------AGL15                                                               <--------        <---------DAG2                                                                      ---------        --------------->AGL15                                                               ---------       <-----------------AGL1                                   <----------DOF2            --------->LBD16       <-----------------AG                                <---------AtMYB61               <---------ATERF1(1)       ----------------->AGL1                           <----------DOF2                    ------>NtERF2     <-----------GT1                                 ------>ZmHOX2a(1)                    --------->ANAC46 ------->ID1<---------ANAC58                        <-----------------AGL1               <---------LBD16 >ARR11(3)  <---------ANAC58   ----------->GT1<------------------------ANAC81            --------->MYB46(3)   gttgtttttacctttcttggtaatttggctgtctggtttttagggattagttttcctccttttggtctttgtctctagggatttttgtttatccgccggc  5656800    <---------YAB1 -NtERF2 -->LBD16 --ATERF1(2) ->RAP2.3(3) --DEAR3(1) ->DEAR3(1) ->DREB2C(2) ->ATERF1(2)                                                                   --------->DAG2 ->RAP2.3(2)                                                  <---------ANAC55(2) >ATERF1(1)                                ----------->GT1<-----------HVH21    *TSS -LBD16  <-----------GT1                  <---------TOE2(3)   --------->ANAC55(2)    <------MYB46(1) >DEAR4(2)                           <---------YAB1 --------->DAG2            ---------->DOF2 >ORA47(2)                         --------->YAB1  ---------->DOF2 --------->YAB1    <------MYB83   ttatgtatgattttcgacttgtatgttctcgttgcaattctaataagataaaaaaaagcgagtcacatatcaaaatttcaaaaagcttggtacagttttc  5656900                                      --------->ATHB51                  --------->ANAC46                         <---------MYB52(1)                        <---------ARR14(2)                      <------------MYB.PH3(1)                      --------->ARR14(2)                     <---------At5g28300  ------------>CBF         <-----------ARR10        ---------                    --------->MYB52(1)<---------ICU4         <-----------GT1              <----------                   --------->MYB46(3)<---------YAB1          --------->MYB52(1)<---------ALFIN1     <               ------------>CBF   <-------TEIL            <---------ANAC55(2) <---------ZAT18      --   ----------->GT1 <---------ATHB12  --------->ICU4       --------->ANAC55(2) --------->ZAT18  >>>>>>   aaaacatgtaaaacatttccaataaccgttttgaaattcattatttcaataacacggtttacttaaccggttctacgtagtccacccttacccattgaca  5657000                                                          <---------ARR14(2)                                            ----------->GT1                                          ---------->DOF2 --------->ARR14(2)                                       --------->AtLEC2   <---------ARR11(3) -->HVH21                              --------->ANAC58   --------->GLK1(2) --CBF      --------->LBD16     ---------->DOF2  --------->AHL20(2)--------->AHL20(2) -----------GT1              <---------TOE2(3)*TSS    --------->YAB1--------->AHL20(2) --------->HVH21        <----------DOF2--------->ANAC58   --------->ARR11(3)           <---------LBD16 >>>>>>WRKY18    <---------AHL20(2)  <-----------RAV1(2) <---------GLK1(2) ---------->DOF2   --------   tttgacactctgtcccgatataatctcttttgacgaaagtcaggcaaagaaaaaaatgagaatcttcaaataaaaaaaaaagaagagactacggagagtc  5657100                                                            ----------->HVH21                                                           --------->LBD16                                                          <---------ANAC58                                                          <---------ANAC55(1)                                                          --------->ANAC55(2)                                                          <---------ANAC58               ------>NtERF2                                  ------>ZmHOX2a(2)       <---------ANAC55(2)            --------->LBD16                                 <------ZmHOX2a(2)        <---------ANAC46             <---------LBD16                <----------DOF2 --------->ARR14(2)     --------->GLK1(2)            --------->At4g35610 --->GT1    <----------DOF2     <---------ARR14(2)    <---------GLK1(2)          ---------->DOF2 <---   aaaaacagtgagagctttctttcatcttcagccagatcggagcaatcttctccatagattccgtgaaacgatgggaatagccaataagctccggctaagt  5657200                                                              <---------ALFIN1                                                           <-----------GT1                                                        <----------DOF2                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                         --------->LBD16             --------->ARR14(2)                     <---------ALFIN1                --------->AGP1                   --------->AtMYB61                    --------->MYB46(3)               <---------ARR14(2)            <---------ALFIN1                   ------>ZmHOX2a(1)                 --------->ARR11(3)          --------->SPL7                --------->HSFB2a(1)                  <---------AGP1            <---------SPL7               --------->ARR14(2)                    <---------ARR11(3)        <-----------HVH21               <---------ARR11(1)            --------->At4g35610            <---------At5g28300            --------->RAP2.6(2)              <---------At4g35610           <---------WRKY38(1)          --------->At4g35610      --------->ZAT14  <---------At4g35610  <-----------HVH21   --------->At4g35610 <---------LBD16     --------->MYB46(3)--------->ANAC46 --------->DEAR3(1) <---------ICU4<---------ARR14(2) <----------DOF2   <---------CCA1(2)   <------MYB46(1)      -------- ----TEIL <---------At4g35610 <---------ARR14(2)<-----------HVH21       <------MYB83 --------->MYB46(3)   tcatcatctctcagccgaatcctccaccggagaatactttactcatccgctgtcagatctttcaccacatcggaaggtcaccgtcccaccatcgttcata  5657300                          <---------TOE1(2)                       ------>ZmHOX2a(2)                                                         ----                      <---------YAB1                                                            <----               ===============HOX2a_HOX2a                                                      <-----               ------>ZmHOX2a(1)                                                          -----------              --------->ANAC46                                                           ------->TEIL           <---------ARR14(2)                                                         --------->ANAC58           --------->ARR14(2)                                                         --------->ANAC46           --------->ARR11(3)                                                 <---------ZAT6   <-----           <---------ARR11(3)       --------->ANAC58                        <---------ANAC46   ------          --------->GLK1(1)         --------->ANAC58                        <---------ANAC58   <-----   --------->ARR11(3)--------->ARR11(3)                                     <---------ANAC58  <------   <---------ARR11(3)<---------ARR11(3) <-------TEIL                      <---------YAB1 --------->GLK1(2) ->YAB1   <---------GLK1(1)<---------MYB46(3)                 <---------GLK1(2)       --------->ANAC58   aacaaggtctcgatatcctccatgatccttggttcaacaaggtacttgaaaaacttgaaactcagtttctcacattttgagtgtgaacacgaacctggat  5657400                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                        ===========================HOX2a_HOX2a                                                        ========================HOX2a_HOX2a        <-------TEIL                <---------ANAC46    ------>ZmHOX2a(2)    <---------YAB1                --------->MYB52(1)   ============================HOX2a_HOX2a -->ZmHOX2a(2)                   ----------->HVH21     =========================HOX2a_HOX2a -----At4g35610             <---------DOF5.7(2)        <------ZmHOX2a(2) ----AGP1                  --------->ARR14(2)         --------->ARR11(3) >RAV1(2)                  <---------ARR14(2)         <---------AGP1 ----ARR14(2)             --------->DOF5.7(2)         <---------ARR11(3) --->ARR14(2)            <----------DOF2              --------->AGP1 ----ARR11(3)           <---------ANAC46             <---------CCA1(2)      ------>ZmHOX2a(1)   ----- ---CCA1(2)       --------->ZAT18----------->TGA1   ----------->ARR10    ------>ZmHOX2a(1)   --------   ctgattttgattcatgttaggggactgcgtttacgatgacggagagaaatcgtttagatcttagaggtcttcttcctcctaatgttatggactctgagca  5657500  Previous    Next  AGI:  At2g13550.1    Description:  unknown protein Range:  from: 5655624    to: 5656879    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g13560.1    Description:  malate oxidoreductase, putative. similar to malate oxidoreductase, putative [Arabidopsis thaliana] (TAIR:AT4G00570.1); similar to NAD-dependent malic enzyme 62 kDa isoform, mitochondrial precursor (NAD-ME) (GB:P37221); similar to unnamed protein product [Vitis vinifera] (GB:CAO70452.1); similar to NAD-dependent malic enzyme 65 kDa isoform, mitochondrial precursor (NAD-ME) (GB:P37224); contains InterPro domain Malic oxidoreductase; (InterPro:IPR001891); contains InterPro domain Malic enzyme, NAD-binding; (InterPro:IPR012302); contains InterPro domain Malic enzyme, conserved site (InterPro:IPR015884); contains InterPro domain NAD(P)-binding; (I Range:  from: 5657046    to: 5662402    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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