Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <-----------GT1                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------ICU4                                  <---------ICU4                                   --------->ICU4                                  -------->ATHB1                                   --------->AHL20(2)                                 <---------ATHB51                                  <---------ATHB12                                 <---------AHL20(2)                                <---------ATHB51                                 --------->AHL20(2)                                <---------AHL20(2)                                 --------->ICU4                                --------->MYB46(3)                           --------->MYB52(1)                                ----------->RAV1(1)                          ------->GAMYB                                    --------->LBD16                         <---------MYB52(2)                               --------->ANAC46                      --------->MYB46(3)                                 <---------LBD16  <----------ID1 ------ZAT6         <-----------GT1 <---------YAB1   --------->ICU4<---------AHL20(2)   <-----------GT1   agttaactaagaaaaattagtttaacaactaacaaattattaacaacatattgcaatatttgtatttgtttattttgcgcaacaaataattaacaacaaa  5596700                                                     ----------->GT1                                                 --------->AHL20(2)                   <---------YAB1                                                 <---------AHL20(2)            --------->AHL20(2)                                                 --------->AHL20(1)            <---------AHL20(2)----                        <----------ID1          <---------AHL20(2)         <---------YAB1 <---------AHL20(2)                    <---------WOX13(1)        --------->YAB1 ----------->GT1--------->YAB1--------->AHL20(2)              <---------MYB46(3) ----------->GT1--------->AHL20(2)   <---------YAB1 --------->YAB1---   atgcaaatatttgtatttgttgattaacaacaaaatggtttaaactaaaaataatttgtaatttggaaaatatgagtataataaaatcacaattaatatg  5596800                                                                                         ---------->DOF2                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               --------->LBD16                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              --------->ANAC46                          --------->YAB1                                     <---------LBD16                         --------->AHL20(2)              --------->YAB1    <---------ARR14(2)                       --------->YAB1                   <---------YAB1     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <---------ATHB12 --------->ICU4         <---------GLK1(2)       --------->ARR14(2)       - ------->GT1         --------->AHL20(2)    --------->TOE1(3)         <----------DOF2xxxxxxxxxxxxxxxxx -------->GT1       --------->YAB1         --------->TOE2(3)     <---------MYB52(1) ----------->GT1 <   agttaaatagcaaatgaatgaataaaaataaaaattaagcattaacctgaatagaattttcatagtcgtttctttagcatccgcaagagaaaaaagatgg  5596900           ---------->DOF2                      <---------AHL20(2)                             <-----       ---------->DOF2                          --------->AHL20(2)                      <---------ARR11(3) <---------YAB1                                 --------->YAB1                        <---------YAB1 x>smallRNA(i2)                         <------------CBF                         --------->ANAC58 -------->ARR11(3)                    --------->AHL20(2)                         --------->ANAC58 xxxx>smallRNA(si3)     ----------->GT1--------->ATHB12             ----------->GT1   --------->ICU4 ---------ARR11(3)    ----------->GT1 <---------AHL20(2)   ----------->GT1 ---------->DOF2     <-----   aagataatagaaagaaagatgaaatagagaaaaatttgaattaattggaattatatgagggatgaaaaatcagtgaataaagcatgccatgattttagct  5597000                                                                                              <------                                                                                            ---------                                                                                            <--------                                                                                     --------->At4g35610                                                                                     <------NtERF2                                                                                     <---------At4g35610                                                                                    <xxxxxxxxxxxxxxxx                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                                --------->ANAC46   --                                                                                <xxxxxxxxxxxxxxxxsmallRNA(i)              <xxxxxxxxxxxxxxxxsmallRNA(i)                                     <xxxxxxxxxxxxxxxxxxxxx         ----------->GT1                                               --------->ANAC58    <---------ATHB51      <---------ANAC46     ---------->DOF2                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <-------GAMYB  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    --------->ANAC58    <---------ATHB12 <---------MYB46(3)       --------->AHL20(2)                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ========================HOX2a_HOX2a                <------------CBF  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------>ZmHOX2a(2)<------ZmHOX2a(1)        <---------YAB1 ---------->DOF2     xxxxxxxxxxxxxxxxxxxxxxx ----ANAC58  --------->MYB52(2)     <---------TOE2(3)<---------WOX13(1)--------->ANAC46------------>CBF ----ANAC58<--------P     <---------AHL20(2)       --------->ATHB12<-----------GT1<xxxxxxxxxxxxxxxxsmallRNA(i)   tgatcgttgaggggttagtaggagcaaattaaagaatataggtttatttttaaagattgacaaagtattttacaagcccaacaaggcagcccaattataa  5597100                                       --------->ANAC55(2) ---YAB1                               <---------ANAC55(2)                   <---------ANAC58 >YAB1         --------->ANAC58     --------->ARR14(2)                       <---------ANAC58 -ICU4   xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                  <---------ANAC46 xxxxxxxsmallRNA(si3)               <---------ARR14(2)           <----------DOF2 -------->DOF2 --------->ANAC58     <---------ARR11(3)           <---------DAG2                  xxxx xxsmallRNA(le3)          ---------->DOF2                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)x >smallRNA(le3)--------->ANAC46     --------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <--------   caaaagtttctaagtctaagcaaaatgctaaagatgaagatacttgataactatttgtaagtttctactttagcattttgcttagacttacaaacttttg  5597200                                              <---------LBD16                                             <---------LBD16                                          <-------GAMYB                                          <xxxxxxxxxxxxxxxxsmallRNA(s)                                         <---------MYB46(3)                                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                        <---------ANAC46                                        <---------ANAC58                                        <---------ANAC58                                        <---------RAP2.6(2)                                       xxxxxxxxxxxxxxxx>smallRNA(i)                                     xxxxxxxxxxxxxxxx>smallRNA(s)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                    <-------GAMYB                                   <---------MYB46(3)                                  <---------ANAC58                                  <---------RAP2.6(2)                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                  <---------ANAC46                                ------------>AtMYB77                                <xxxxxxxxxxxxxxxxsmallRNA(s)                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                      xxxxxxxxxxxxxxxx>smallRNA(s)                      <---------ANAC58                      --------->ANAC46------------>AtMYB77   --------->At4g35610              ----------->GT1 <-------GAMYB  <xxxxxxxxxxxxxxxxsmallRNA(i)                           -          --------->ATHB12 <---------At4g35610<---------ANAC58          <---------RAP2.6(2)         -          <---------WRKY18(1) xxxxxxxxxxxxxxxx>smallRNA(i)   <---------At4g35610                  <--         ----------->HVH21 --------->At4g35610<---------ANAC58          <---------ANAC58          <--        <----------DOF2    <------NtERF2xxxxxxxxxxxxxxxx>smallRNA(i)   <---------LBD16        xxxxxxx       <---------ANAC58   ------------>AtMYB77<---------ANAC46  ------>NtERF2                 xxxxxxx xxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ANAC58        ---------->DOF2                  <xxxxxxxxx xxxxxxxxxxxxxxx>smallRNA(i) <---------MYB46(3)--------->LBD16 --------->ZAT18      <---------MYB52(1) --DOF2<---------ANAC58  <---------DEAR3(1) <xxxxxxxxxxxxxxxxsmallRNA(i)<---------ANAC46 <-----------GT1   catattagggcttgactggtttaaacggcagcggttgcggttgcggttgcgggagtttgcgaaagcggacaattgcggtttcaagcgttatttagcattt  5597300                                            <-----------GT1                                        xxxxxxxxxxxxxxxx>smallRNA(s)                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                    --------->LBD16                                   <---------ANAC58               --------->At5g28300 <---------ANAC58   ------>MYB46(1)                 <---------LBD16                                              <----   ------>MYB83----------->GT1     <---------ANAC46                                          <------- ------->ZAP1 <---------MYB46(3)  xxxxxxxxxxxxxxxx>smallRNA(i)                               -------- -------->DEAR3(2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        <---------MYB59 ---------GT1 ----------->GT1     <---------LBD16      --------->WOX13(1)              -------------- -------WRKY18(1)        <---------ANAC58 --------->CCA1(2)                --------->At5g28300  ----- xxxxxxxxx>smallRNA(i)   <---------ANAC58xxxxxxxxxxxxxxxx>smallRNA(i)     ----------->GT1 ------>MYB83 xxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxx>smallRNA(s)               <---------MYB46(3) -------- xxxxxxxxxxxxxxsmallRNA(se3) --------->ALFIN1      ----------->GT1       <---------ANAC46 ------>MYB46(1)   tgaccgactggtttagcggttaaaaatgggtgtgtttgcgggagatttacgactggttaatcagcgagtacaatagcggttaaaccattaccaaattttt  5597400                                                                                                    -                                                                                                    <                                                                                                    <                                                      ----------->GT1                              <-                                                     --------->DAG2                                --      <---------YAB1                                ---------->DOF2                              ---- --------->AHL20(1)                             <---------YAB1                                   <--- <---------AHL20(1)                           -------->HAHB4                                    ----- -----AHL20(2)                                <---------ICU4                                    <---- --AHL20(2)                                   --------->YAB1                                    <---- ->AHL20(2)                                --------->YAB1                      --------->ICU4   ----- --->AG                                    <--------HAHB4              --------->TOE2(2)      ------- ---->AHL20(2)                            <---------YAB1               --------->TOE1(2)  --------->TOE1(3) ->AHL20(1)                   <----------ID1 --------->ICU4           --------->YAB1      --------->TOE2(3)   taatatatatgattttaaaacaaaaactaaaaacaccaaaaactataattatgaaaaagtataaatttttaaacataagaaatgatcaaaaaccataaat  5597500                                            ----------->GT1                                        <---------YAB1                                        <---------TOE2(3)                                       --------->YAB1                                       <---------AHL20(2)                                       --------->AHL20(2)                                     <---------YAB1                                   -------->HAHB4                                   <---------ICU4                                   --------->ATHB51      --------->ANAC58             -------->ATHB1      --------->ANAC58             <--------HAHB4      ----------->GT1              --------->YAB1 ------->HAHB4                     <---------AHL20(2) ---------ICU4                    <---------ATHB51 ---------AHL20(2)                <---------YAB1                              <---------ARR11(3)   -- --------YAB1                   --------->YAB1                                --------->ARR11(3)   <- ------->ICU4                  --------->AHL20(2)                  <---------AHL20(2)             <-- ----->YAB1                    <---------AHL20(2)                  --------->AHL20(2)         ------- ------ICU4                    <---------ATHB51             <---------At4g35610           ----------- ---->ICU4                    --------->AHL20(2)            --------->At4g35610<---------AHL20(2)<--- -----ATHB51 --------->AHL20(2)--------->ICU4         <---------TOE2(3)       --------->AHL20(1) <--- -----AHL20(2)  <---------TOE2(3) --------->ICU4      <---------TOE1(3)       <---------AHL20(1) <--- ---->AHL20(2)<---------AHL20(2)<---------ICU4       ---------->DOF2          <---------AHL20(2) ---- -->YAB1--------->AHL20(2)    <---------AHL20(1)    <---------AHL20(2)        --------->AHL20(2) ----   aattattcaagtaaattttatgttgaaaacaaaataattattaatattgaaaatttaaagttagatgaaataaatgtgaatatatttaagacttgataat  5597600  Previous    Next  AGI:  At2g13430.1    Description:  unknown protein Range:  from: 5597134    to: 5598504    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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