Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------ZAT14                          --------->ZAT14                 <---------LBD16               <---------ARR14(2)                                                              <-----               --------->ARR14(2)                                                         <----------DOF2           ----------------->AGL1                                                       ------>ZmHOX2a(1)     --------->LBD16      --------->ZAT18                                               =============    --------->LBD16   <---------KAN4(2)                                                 =============   <---------LBD16  <---------MYB52(1)                                                <-------------- -------->DEAR3(1) --------->LBD16                                                   ---------->ID1 ---TEIL   <-----------------AGL1                         ----------->RAV1(2)        <-----------GT1 ->LBD16  --------->MYB52(1)        ------>ZmHOX2a(1) --------->ATERF1(1)           <-----------GT1   catcgcccggattaccggttccggtatgttcactggtcctggtacaaacagatggtgtctccctggtccatacatatagtccattttttcctcttttctt  5548000                <-----------HVH21           <---------ZAT14           --------->ZAT14        ------>ZmHOX2a(1)     ------>ZmHOX2a(1)   ------>ZmHOX2a(2)  =============HOX2a_HOX2a  <------ZmHOX2a(2) --------->ARR14(2) <---------ARR14(2)                                                                         <-------- -----DOF2 <---------REM1(2)                                                                --------- =========HOX2a_HOX2a                                  <---------ARR11(3)             <-------MYC3 ========HOX2a_HOX2a                                   <---------GLK1(2)              ------->MYC3 ----------ANAC81 <<<<<<<<<WRKY18             <----------DOF2                <---------REM1(1) ------   ttggatcctcctctacactgtcaaaaacttacaaactcacaatctcatctttcaccagataatcgaatataactcaaacatgtagccatatgcatatatg  5548100       --------------->AtSPL8                                                               --------- ----------->GT1                          --------->YAB1                        --------->AHL20(1) -ARR14(2)                             --------->YAB1                 --------->YAB1  <---------At4g35610 >ARR14(2)                      --------->LBD16                    --------->YAB1<---------YAB1 ----->HVH21                  <---------LBD16          <---------AHL20(2)--------->YAB1    <------ZmHOX2a(2)   accatgtaatatgtactattgctactatcaactccggtgaacaataacaaatgttattttttttgttaataacaataacaaatatgttagccgatcatat  5548200                                 <---------ARR11(3)                                 --------->ARR11(3)                           --------->YAB1                        <---------------AGL15                        --------------->AGL15                    <---------ZAT14                    --------->ZAT18               <------ZmHOX2a(2)         <----------ID1                    <---------ZAT18               <---------YAB1  <---------------------WRI1                    --------->ZAT14              --------->ARR11(3) ----------->GT1           -------                  --------------->AtSPL8   --------->ANAC58      --------->MYB52(1)           -------                  <---------------AtSPL8   --------->ANAC58    ---------->DOF2    ----------->GT1 >YAB1   ----------->RAV1(1) ---------->DOF2     <---------ARR11(3) --------->LBD16         <--------   ttccaataagacaacatatatgtgtactataaaaagatgtttcataggcaagatcatagacacaaacaagcggagaaaacgaagaagtaaatttgcaagg  5548300                                   ------>ZmHOX2a(1)                                 ----------->RAV1(2)                                            <----                              --------->HSFB2a(1)                                             -------                              --------->At4g35610                                --------->ARR11(3)                              <---------At4g35610                                <---------ARR11(3)                              <---------HSFB2a(1)                               <---------CCA1(2)                              <---------HSFC1(2)                               <---------ARR11(3)                              <---------ZAT2                                   --------->AHL20(1)     ----------->GT1          --------->HSFC1(2)                               <---------AHL20(1) -->ANAC58              <---------LBD16     <---------ARR14(2)                 --------->ARR11(3) -->ANAC58            --------->DAG2      <------MYB46(1)                      <---------AHL20(2) -AtLEC2  <-----------GT1  <------NtERF2  <------MYB83 ------>ZmHOX2a(1) <----------DOF2  <----------DOF2   aagagagaagtttaacctctgaataaggcggaagctcctgagggaggttttggactccttcgtcttcacaaacctctttaatatatcttcttctttttct  5548400                      --------->AHL20(2)                      <---------AHL20(2)                <---------AHL20(2)                                                        --------->ATHB12                --------->AHL20(2)                                                      =============               <---------AHL20(2)                                                       <----------DOF2            --------->AHL20(2)                                                          <---------DAG2       --------->AHL20(2)   --------->ANAC55(2)                                         --------->TOE2(3)       <---------AHL20(2)   <---------ANAC55(2)                                    <---------ANAC58       <---------AHL20(1) <-----------GT1                                  <---------ATHB12   <---------AHL20(2)--------->AHL20(2)                                  --------->WOX13(1)<---------  <---------AHL20(2)<---------AHL20(2)                                 <---------------AGL15    <---- ------DOF2 <---------AHL20(2)                   <---------AHL20(2)    ------------>CBF-------------- --->ID1   <---------AHL20(2)           *TSS  ----------->GT1 <---------AHL20(2)   <---------ANAC58   tttttttattttatttatttattttaaattacatgatgtttttgtaagtagtttattttgttatttagtttatcccaatcaagtagcttgccttattgga  5548500                --------->CCA1(2)              <---------At4g35610         --------->ALFIN1        ------->MYC3        <-------MYC3       <---------TGA1a       <---------ANAC46       --------->O2       <---------O2                           <---------ANAC58       <---------ANAC58                       <---------ANAC58       --------->ALFIN1                       <---------ANAC55(2)       <---------ANAC58          --------->GLK1(2)      ------>NtERF2              --------->ARR11(3)      <------NtERF2      <---------ANAC46     <---------ANAC55(1)                    <-----------GT1    <---------RAP2.6(2)  ----------->GT1      <---------ANAC46                    <---------ARR14(2) ================bZIP_DOF--------->O2    <---------At4g35610              --------->TOE2(3) ---CBF--------->TGA1a   <---------O2    --------->At4g35610           <-----------GT1 -----GLK1(2) --------->At4g35610<---------ARR11(3)            ------->TEIL<----------DOF2 --->AGL1----------->HVH21 ----------->GT1    --------->ANAC55(2)   <---------ZAT6--------->ARR14(2)   atcttggccgcgtggcagataagagcaacgtgaaaaatctttgagcttacgtatggctcacaatgcatttgtgttacctttgcatatttgcccttcttct  5548600                                                              <---------ATHB12                                                    --------->YAB1                                                    <---------ICU4                                                   --------->ICU4                                                 --------->YAB1<-----------GT1                                               --------->AHL20(2)                     <------ZmHOX2a(2)                                     <---------ANAC58  <---------ICU4                --------->ARR11(3)                                     <---------ANAC58  --------->YAB1           --------->YAB1                <-----------GT1      <---------ANAC46 --------->ICU4        <---------AHL20(2)        <-----------GT1             ---------->ID1 <---------YAB1   <----------DOF2 --------->GLK1(1)   ctcttatatttttcagtttttccacattagtttgttttgtcgtgttcaaaataataataatcaaatcactctttttttttaatcagagatcaagactctc  5548700                                           <---------ANAC46                                          <------NtERF2                                         --------->LBD16                                         ------>NtERF2                                        --------->ANAC46                                       <---------MYB55(2)                                       --------->MYB46(3)                                       <---------LBD16                                     <---------ARR14(2)                                     --------->ARR14(2)                                     ------->TEIL                                   <---------ZAT14                                   --------->ZAT14         ==========================================                                   --------->ZAT18         --------------->AGL15                                   <---------ZAT18 ------->GAMYB                        <---------AHL20(2) --------->ZAT6                 <---------ANAC46<-----------GT1           <---------TOE2(3)         <   ttaccactgactaatcttcttaaaaactcttggtgagtgtacccgccgtataacccgcttactaaatttgtttattgacgaagagtgtatttaatctagt  5548800                                                        <---------AHL20(1)                                                        --------->AHL20(2)                                                        --------->YAB1                                                        <---------ICU4                                                        <--------ATHB1                                                       --------->ICU4                                                     --------->YAB1                                             <---------TOE2(3)                                  <----                                           <---------ICU4           --------->AHL20(2)         <-----                                           -------->HAHB4           <---------AHL20(1)         ------                                          --------->ICU4<---------AHL20(2)                  <--------                                          <---------ATHB51 --------->YAB1                   <--------ATHB1                                       <---------------AGL15  --------->YAB1                ---------                                       --------------->AGL15 <---------YAB1                 <--------                                      <-----------------AGL3--------->AHL20(2)              ---------            ----------->GT1    <---------TOE2(3)    <---------YAB1  <---------AHL20(2)     <---------ATHB12      --------->ATHB12       <---------AHL20(2)    <---------AHL20(2)        <---------ZAT6<---------ATHB51   --------->ANAC55(2)      --------->AHL20(2)     --------->AHL20(2)<---------AHL20(2)    --------->ICU4 ======================================================MADS_MADS --------->YAB1          --------->YAB1 ---------AHL20(2)   <-----------GT1  <-----------------AGL2<---------AHL20(2)    <---------YAB1-----   attttaagtgatttgtgtaaaatttacaaattttatgttatctaattatggattttaataattttaataataaaatttagtgttattaaactaataattt  5548900  Previous    Next  AGI:  At2g13360.1    Description:  AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE). Identical to Serine--glyoxylate aminotransferase (AGT1) [Arabidopsis Thaliana] (GB:Q56YA5;GB:O81248); similar to aminotransferase 1 [Cucumis melo] (GB:AAL47679.1); similar to aminotransferase 1 [Cucumis melo] (GB:AAQ56194.1); similar to aminotransferase 1 [Cucumis melo] (GB:AAQ56192.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421); contains InterPro domain Aminotransferase, class V/Cysteine desulphurase; (InterPro:IPR000192) Range:  from: 5546322    to: 5548440    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version