Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->LBD16                                                     --------->ZAT14                      xxxxxxxxxxx                                                    ======================================MYC_MYB                                                    ------->GAMYB                         xxxxxxxxxxx                                       <---------HSFB2a(1)                               xxxxxxxxxxxx                                       --------->HSFB2a(1)                             <------NtERF2                                       --------->HSFC1(2)                              xxxxxxxxxxxxxx                                       <---------HSFC1(2) --------->ZAT14   <---------ALFIN1                                     <xxxxxxxxxxxxxxxxsmallRNA(i)         --------->LBD16--------->ZAT2                                     --------->ARR14(2)   <---------ZAT14 ------>NtERF2xxxxxxxxxxxxxx                                     <---------ARR14(2)--------->DEAR3(1)--------->ANAC58----------->RAV1(2)                                <xxxxxxxxxxxxxxxxsmallRNA(i)<---------At4g35610 <---------TGA1a                             xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------At4g35610   <---------ANAC58                             xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      --------->DEAR3(1)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         --------->ANAC58<---------ZAT2                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->ZAT2   --------->TGA1a -----                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------ZAT2   --------->O2xxxxxxxxx                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->At4g35610   <---------ANAC58               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)--------->MYB46(3)    --------->ANAC46xxxxxxxxxxxx              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  -------->P------>ZmHOX2a(1)  <xxxxxxxxxxxxxxxxxxxxx          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  --------->MYB46(3)    --------->AtMYB61xxxxxxxxxxxxxx          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------At4g35610  ------->TEIL<---------O2<xxxxxxxx          <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    --------->At4g35610<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->At4g35610  ------>ZmHOX2a(1)     --------->ANAC46<-----------RAV1(1)    <---------ANAC46   ------>ZmHOX2a(1)   --------->TOE2(3)    ------>ZmHOX2a(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) < --------ARR14(2)  --------->YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)--------->DEAR3(1)<xxxxxxxxxxxx ------->ARR14(2) <---------ATHB12xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------ALFIN1<xxxxxxxxxxxxxx >NtERF2 <---------At4g35610<xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <----- -At4g35610  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)========================================MYC_MYB  <- >At4g35610 --------->At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)<---------ALFIN1 <------NtERF2 <<<   caatcctctgcaactgctccatcatcctcaaataagatggaacctcctcagcaaccgcagtcctctgctgcacctccgccactcgtggcgcaactggagc  5237700                                                                                             --------                                                                                            ---------                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                          ------>NtERF2                                                                                         --------->DEAR3(1)                                                                                         <---------ALFIN1                                                                                        <------NtERF2                                                                                        --------->ATERF1(1)                                                                                        <xxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <---------RAP2.3(1)                                                                                       <---------ATERF1(1)                                                                                       xxxxxxxxxxxxxx             ===========================RAV                                           <xxxxxxxxxxxxxx             ----------->RAV1(2)                                                      <xxxxxxxxxxxxxx            ------>NtERF2                                                             <---------DEAR3(1)           --------->ANAC58                                                          --------->ATERF1(1)           --------->ANAC46                                                          --------->At4g35610           --------->ANAC58                                                          <---------At4g35610         <---------ALFIN1                                                            <---------LBD16       --------->SPL7                                                                <------NtERF2 xxxxxxxxxxx>smallRNA(se3)                                                          <---------ATERF1(1) xxxxxxxxxxxx>smallRNA(se3)                               ------>MYB46(1)           <---------RAP2.3(1) xxxxxxxxxxx>smallRNA(fl3)                                ------>MYB83              <---------ERF1 xxxxxxxxx>smallRNA(si3)                           <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------DEAR3(1) xxxxxxxxx>smallRNA(fl3)                          >>>>>>>>>E2Fc                   <---------At4g35610 ---->ATERF1(1)                                   >>>>>>>>>E2Fd                   <---------ZAT2 xxxxxxx>smallRNA(i)               <-----------HVH21      -------->P              ----------->RAV1(2) xxxxxxxxx>smallRNA(fl3)          ------->GAMYB  ------>NtERF2                   ------>NtERF2 xsmallRNA(fl3)                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <---------ATERF1(1) xxxxxxxxx>smallRNA(se3)      <---------MYB55(2) --------->LBD16                 --------->LBD16 xxxxxxxxsmallRNA(i)          --------->MYB46(3) <------NtERF2 <---------HSFB2a(2)--------->ZAT2 ---------ALFIN1            ----------->RAV1(1) --------->ANAC58               <---------LBD16 xxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->AtMYB61     ------>ZmHOX2a(1) xxsmallRNA(i)         --------->At4g35610      --------->ANAC46            --------->ATERF1(1) ----ATERF1(1)       --------->MYB46(3)         --------->ANAC58    ----------->RAV1(2)------>NtERF2 --------ZAT14       <------------MYB.PH3(1)   <---------LBD16 --------->HSFB2a(2)<xxxxxxxxxxxxxxxxsmallRNA(i) <<<<<<<<<<<<<<LFY --------->ARR14(2)    --------->ZAT2--------->MYB46(3)  <---------ATERF1(1) <-----   ctccactggtaccacgcctggtaaccgctccaacaactgtctcagcatgcccgccaaaccaacctctagagcctgggctcctccggctgcggcacccatc  5237800                                                                  =================RAV                                                                  --------->At4g35610                                                                  <---------At4g35610                                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                 ------>NtERF2                                                               <---------LBD16                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                           <---------ALFIN1                                                          --------->MYB46(3)                                                          <------NtERF2                                                        --------->RAP2.3(3)      --------->RAP2.6(3)                                                        --------->RAP2.6(2)     --------->ARR14(2)                                                        --------->PCF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      ------>MYB46(1)<------NtERF2                   --------->ANAC46                   ------>MYB83----------->RAV1(2)                   --------->ANAC58                   --------->ZAT2 --------->ZAT18                  ------>MYB83                       --------->ANAC46<---------ZAT14                  ------>MYB46(1)                   <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->At4g35610                     <---------ALFIN1<---------ATERF1(1)     --------->PCF2--------->ANAC58                 --------->MYB46(3)     --------->At4g35610     <---------ZAT18------->GAMYB                   --------->AtMYB61--------->At4g35610 ->ANAC46   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------ALFIN1--------->LBD16<---------ARR14(2) >MYB46(3)---------->CDC5                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <------NtERF2 xxxxsmallRNA(i) --------->MYB52(1)          --------->At4g35610 <---------ATERF1(1)  ------>NtERF2 xxxsmallRNA(i) --------->DEAR3(1)        ----------->RAV1(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xx>smallRNA(s) --------->AtMYB61 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxsmallRNA(se3) --------->AtLEC2  <---------At4g35610<---------ALFIN1<----------DOF2 xxsmallRNA(i)  --------->TOE1(2)--------->ARR14(2) <---------MYB55(2) ----------->RAV1(1) ----ATHB12 <---------At4g35610  <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         xxxx   actcttgggccctcagcaccaacgacatgcacaccgatactgacacctgctccaccagcccccactccggctgcaccagctatatcggcaccaagaccgt  5237900                                                                                        <------ZmHOX2a(1)                                                                                     --------->HSFB2a(2)                                                                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                                                               --------->SPL7                                                                               <---------ZAT18          --------->PCF2                                                     <---------MYB52(1)          xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                               <---------ATERF1(1)          <---------TCP20                                                   <---------DEAR3(2)          <---------TCP16(1)                                               <---------TOE1(2)        ------>NtERF2                                                      <---------ATERF1(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                              --------->ATERF1(2)        <---------ATERF1(1)                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                              <---------LBD16       --------->LBD16                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------LBD16               <---------ALFIN1              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      --------->LBD16      --------->At4g35610                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------LBD16       <---------At4g35610                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    ------->GAMYB          <------NtERF2                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  ------>MYB83       <-----------RAV1(2)                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  -------->P<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ------>MYB46(1)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------ALFIN1           <xxxxxxxxxxxxxxxxsmallRNA(fl3)      ----   ctccaaccccgggctccacaaactcaggctgcaaacccacactcttctcaatagtggcattgtggccatcactctcgccggtaccctcgaggactcgtcc  5238000                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  --------->ANAC58                               <xxxxxxxxxxxxxxxxsmallRNA(s)                            --------->ANAC58                            --------->ANAC58                         <xxxxxxxxxxxxxxxxsmallRNA(s)                      --------->ANAC58                      --------->ANAC58  --------->ANAC58                --------->ANAC58  --------->ANAC58                           --------->ZAT18                --------->ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC46          --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           --------->At4g35610          --------->ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          ----------->RAV1(2)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ANAC58           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->ANAC58    <----------DOF2      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)*TSS      ------>NtERF2  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    --------->ARR14(2)     ------>NtERF2   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------ARR14(2)  xxxxxxxxxxxxxxxxxxx     xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->ANAC58      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   ------->GAMYB   --------->LBD16 <xxxxxxxxxxxxxxxxsmallRNA(s)     --------->ANAC58   --------->MYB46(3) -->ZmHOX2a(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ANAC58 <-----------GT1   tctaccgcgaccacgaccacgaccacgaccacgaccacgaccacgaccacgaccacgaactccagttcctttaaccatctgcgctactcaagaacaaatg  5238100                                                                                             <xxxxxxx                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                                                           --------->ANAC58                                                                                          ------->GAMYB                                                                                         <xxxxxxxxxxx                                                                                       ----------->RAV1(1)                                                                                    ----------->RAV1(1)                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                              <------ZmHOX2a(1)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                     --------->ARR11(3) --------->LBD16              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     <---------ARR11(3)<---------ANAC46            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->MYB52(1)     <---------At5g28300     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          --------->YAB1             -------->P        <---------TOE1(3)      <xxxxxxxxxxxxxxxxxxxxxx xx>smallRNA(se3)    --------->AHL20(1)----------->GT1 <---------TOE2(3)<---------YAB1--------->MYB46(3)   gctaagaaactaaaataaacgaatatatcacaaactacttaccgtgaaatctcatttaaggctcagagaagatgatgctaggactccaacaacacacaat  5238200                                                          -------->ATHB1                                                          <------------ATHB5               <---------ALFIN1                                                          --------->ATHB51          <---------AHL20(2)                                                          --------->YAB1            <---------ICU4           --------->LBD16 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------ATHB51-------->HAHB4          <---------ANAC55(2)       --------->ANAC58      <---------ICU4           <---------YAB1          --------->ANAC55(2)       --------->ANAC58      --------->ATHB12         <---------ATHB51       --------->ANAC46    --------->ZAT14                <--------ATHB1           --------->ICU4     --------->ZAT6   ------>ZmHOX2a(1)                  --------->ICU4         --------->AHL20(1) xxxxxxxxxxxxxxsmallRNA(si3)      <---------ALFIN1     --------->WOX13(1)       <---------AHL20(1) xxxxxsmallRNA(i)    --------->TOE2(3)           <---------ALFIN1   <---------AHL20(2)    <---------REM1(2) xsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ATHB12       <---------AHL20(2) xxsmallRNA(s2)  --------->WOX13(1)------->GAMYB ----------->RAV1(1)--------->AHL20(2)<---------YAB1 xsmallRNA(i2)  <---------ICU4    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)       --------->WOX13(1)   === xsmallRNA(se3)<---------ATHB12  <xxxxxxxxxxxxxxxxsmallRNA(s)     --------->YAB1--------->AHL20(2)---   tgactaaacactccgtaatcaatcctcagtatgctaacaccctagctcatcccacatcaatcattgaaaaataattcatcaattaattattctacacatc  5238300                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                              -------                                                                                  <---------ARR11(3)                                                                                  --------->ARR11(3)                                 --------->MYB52(1)                              --------->RVE1(1)                       ------>MYB46(1)                                           --------->CCA1(1)                       ------>MYB83 --------->ANAC46                  --------->KAN4(2)      --------                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          <---------ICU4         >>>>>>>>>                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <---------AHL20(2)       <---------           XXXXXXXXXXXXXXXXXXXXX>MIR845B                         <---------AHL20(2)      --------->AHL20(2)          ------>ZmHOX2a(2)      -------->P                      --------->AHL20(2)      <---------AHL20(2)    ------->GAMYB     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------ICU4     <xxxxxxxxxxxxxxxxxxx  <---------At5g28300 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------YAB1   xxxxxxxxxxxxxxxxxxxxxxx ================HOX2a_HOX2a   --------->MYB46(3)            --------->ICU4 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --->ZmHOX2a(1)      <---------MYB59----------->HVH21      --------->YAB1   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ctataaccgtgatcgctctaataccaaattgaaacaacccgacccatttttgttttttaaaacataattaaatattcccataaatatctaattaaaccaa  5238400    ----------->GT1                                             ------>MYB46(1)   --------->DAG2                                               ------>MYB83  ---------->DOF2                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------ATHB12                                              ----------->RAV1(1) ------ATHB12                                                 ------->GAMYB ----->MYB46(3)                                               --------->AtMYB61 ------MYB55(2)                                              <---------MYB52(2) ---->ANAC58                                                 <---------MYB55(2) --->P                                               <---------ATHB51 ->MYB83                                             --------->AHL20(2) ---->ANAC58          --------->ANAC58            --------->AHL20(2) ->MYB46(1)           --------->ANAC58       --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)-- -->AtMYB61        <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------AHL20(2)                                -- ->MYB46(3)   ---------->DOF2                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  -- >MYB80      --------->AHL20(2)----------->GT1   --------->AHL20(2)        --------->YAB1    -------- --GT1   --------->ICU4 <xxxxxxxxxxxxxxxxsmallRNA(i) <---------AHL20(2)    <---------ICU4 xxxxxxxxxxx xxxsmallRNA(se3)  --------->LBD16       <---------YAB1      --------->MYB46(3)           ------>ZmHOX2a(1) >smallRNA(si3)   --------->ANAC46    <---------AHL20(2)    --------->ANAC46  <xxxxxxxxxxxxxxxxsmallRNA(i)   ccaataaagtaacaattaaaccgcaagtcaaaaatgttattttatgaataaataaataattcaaccaacaaaaccaagaatgactaaaaatcctaacaca  5238500                                                                 <---------ANAC58                                                                 <---------ANAC58                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                          ================================HOX2a_HOX2a                                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                                          ------>ZmHOX2a(1)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                          xxxxxxxxxxxxxxxx>smallRNA(s)                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --                                                       xxxxxxxxxxxxxxxx>smallRNA(s)            <xxxxx                                                     xxxxxxxxxxxxxxxx>smallRNA(i)            xxxxxxxx                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <xxxxxxx                                                    <------ZmHOX2a(2)                       <xxxxxxxx                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxx                                                    =============HOX2a_HOX2a                xxxxxxxxx                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   xxxxxxxxx                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxx                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxx                                                   --------->ARR11(3)                       <--------                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <xxxxxxxxx                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxx                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxx                                                   <---------ARR11(3)   <---------YAB1    xxxxxxxxxxx                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxx                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)           <xxxxxxxxxxx                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxx                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxx                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <xxxxxxxxxxx                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxx                                                --------->HSFB2a(2)     <---------ATHB12 xxxxxxxxxxxx                                                ------>ZmHOX2a(1)xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxx                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxxxxxxx                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxx                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     <----------DOF2                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <---------DAG2                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxx                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      xxxxxxxxxxxx                                              <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->TOE1(2) <-----                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       <xxxxxxxxxxxx                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <xxxxxxxxxxxxxxx                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxx   -------->P                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxx  --------->MYB52(1)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxxxxxxxxxxxx ----------->HVH21                    ------>MYB83xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxx ----->GAMYB--------->YAB1            ------>MYB46(1)xxxxxxxxxxxxxxxx>smallRNA(s)  <------ZmHOX2a(2) ------->TOE1(3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->ICU4 <xxxxxxxxxxxxx ------->TOE2(3)                 <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxx ->ZAT6    <---------YAB1    --------->YAB1 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxx xxxxx>smallRNA(s)         --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxx   accctaaccggttctaataaccaaaacataaaaataaaccaaatgagttcctagatcatcctctcttccttgccatgattctacgatcacactttatctt  5238600  Previous    Next  AGI:  At2g12750.1    Description:  transposable element gene. gypsy-like retrotransposon family, has a 1.5e-93 P-value blast match to GB:CAA73042 polyprotein (Gypsy_Ty3-element) (Ananas comosus) Range:  from: 5235302    to: 5238078    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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