Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ---------->DOF2                             <---------ANAC46         <---------ARR14(2)   --------->ATHB12        <-                             <---------ANAC58--------->MYB46(3)     ------>MYB46(1)            ------                   <---------ARR14(2)       ------>MYB46(1)         ------>MYB83     --------->ARR11(3)                   <---------ARR11(3)       ------>MYB83            -------->P       <---------ARR11(3)                   --------->ARR14(2)       -------->P--------->ARR14(2)  <---------ATHB12    <------                   <-----------ARR10     --------->MYB46(3)  <---------GLK1(1)       --------->GLK1(2)                   --------->ARR11(3)<---------ZAT18 <---------MYB52(1) ------>MYB83<---------GLK1(2)       <---------GLK1(1)     <---------ANAC58<---------ATHB12--------->GLK1(1) <-----------GT1<------ ---HVH21     --------->ANAC46  <---------ARR14(2)  <---------DEAR3(2)  ------>MYB46(1)       -------   atggtatggacatcccacgaagaacttctctgcgtatagcgcatccaaccatgccggtttctgaattccctaccaaatgatttacaaaatctctaaaata  5175900                        --------->AHL20(2)                                           <---------ANAC55(2)                      <---------ANAC55(2)                                            --------->ANAC55(2)                      ----------->GT1                                              <---------AHL20(2)               --------------->AGL15                                            --------->YAB1               <---------------AGL15                                            <--------HAHB4 ----------GT1--------->TOE2(3)                   <---------At4g35610   <---------AHL20(2) --->AHL20(2) --------->TOE1(3)            <---------YAB1              --------->AHL20(2) --------->TOE1(2) ---AHL20(2)  --------->YAB1               --------->ICU4       --------->MYB46(3) --------->AHL20(2) ---AHL20(1) <<<<<<<<<ARR1               --------->YAB1      --------->REM1(1) <---------YAB1 -->AHL20(1) <<<<<<<<<ARR2               --------->TOE2(3) ------>ZmHOX2a(1)   <---------AHL20(2)   -   tttatctcataaacaatcttaaataagtaaataaaacttcataccataattcaactgtttcctacatccaccattaaatctataattaagtaccaaggag  5176000                                         <---------YAB1                                         --------->ICU4                                      <---------TOE2(1)                                      <---------TOE1(1)                                 --------->MYB59                 <-------TEIL --------->GLK1(1) ----------->GT1                                 -----             <---------------AtSPL8<---------SPL7       <-----------GT1                         -----           --------->DAG2   <------ZmHOX2a(1)  <---------TOE1(3)                                -----          ---------->DOF2 <---------TOE2(3) <---------WOX13(1)                                -------       <------ZmHOX2a(1)  --------->ANAC46--------->ATHB12                                    <------     <---------TOE2(3)--------->YAB1 --------->SPL7     --------->ZAT6                        <------ -------->ICU4----------->GT1 <---------GLK1(1)<---------TOE2(3)                           <---------   ccaagatgaggataaagggtacaaatataaggaattcggtacgatgattgaggtaatttcactacttaagatggtatagaattgaagaagtagtaaccta  5176100                       <----------DOF2                     <---------ZAT2    <------ZmHOX2a(1)<---------At4g35610 --->P               --------->ZAT2 ->MYB46(1)          --------->At4g35610                                               <---------ARR14(2) ->MYB83  <---------At4g35610                                  ----------->GT1         --------->ARR14(2) -->TOE1(2) ------->GAMYB                                  ---------->DOF2             <---------GLK1(2) ---MYB59 --------->At4g35610                           <---------------AGL15         <------ZmHOX2a(1) ---MYB111(1) ---------->DOF2          <----------DOF2  --------------->AGL15     ---------->DOF2 --GT1   --------->MYB52(1)      ----------->GT1  --------->ZAT14         <------ZmHOX2a(1)<---------   ccatgaggactcaactgaaagtcagctttgggagatggaaacttttggccactactcactacaaagagtaatattaggaagagaaaaaggattctttagg  5176200                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                              <---------HSFB2a(2)                                                                              <---------LBD16                                                                         --------->KAN4(2)                                                                        <---------KAN4(1)              <------ZmHOX2a(1)                                         <---------ICU4       <-------              ====================HOX2a_HOX2a   ----------->GT1     <---------AHL20(2)  <-----------GT1         --------->ATHB12  <------ZmHOX2a(2)  ----------->GT1      *TSS<---------YAB1--------->CCA1(2) -DOF2  <---------YAB1   <------ZmHOX2a(1)---------->DOF2       <---------YAB1------>ZmHOX2a(1)   ggagtacttgatgataggatttatggaggatcacaagggagagagaaagagagaaaaaaaaaacttatatttgattattcctcggagatataactctttt  5176300                                                                                                 <---                                                                                                 ----                                                                                            ---------                                                                                           ------->MYC3                                           <---------MYB46(3)                              <-------MYC3                                           <------MYB46(1)                                 <-------MYC2                           <-------GAMYB   <------MYB83                                    ------->MYC2                          <---------MYB46(3)                                               --------->TOE1(2)                          --------->MYB55(2)    --------->At4g35610                       ===========                        <-------GAMYB  <-----------RAV1(1)                                <---------TGA1a           <---------YAB1 --------->MYB111(2)   <---------At4g35610             --------->DAG2   <---          --------->ARR11(3)           <---------ZAT6                          =====================bZIP_DOF     <---------AHL20(2) <---------ANAC58  <---------AtMYB61          ===============================bZIP_DOF     --------->AHL20(2) <---------ANAC58 <--------P                  ---------->DOF2   <------ZmHOX2a(1) ---DOF2  <---------ARR11(3)       <---------YAB1        --------->CCA1(2)     ---------->DOF2 <-----   acacattttaaatatcatataaacttggttgttgtttattagtgttggtgagatgagagatagagggaagaaaaagagagagaaagtgaggaacgtggga  5176400      --------->LBD16     <---------ANAC58     <---------ANAC46     --------->ANAC55(2)     <---------ANAC55(1)                                               <-----------GT1     <---------ANAC58          <---------AHL20(2)                 ----------->GT1 ------ZAT2                   <---------YAB1            <---------ARR11(3) ----->At4g35610           <---------AHL20(2)     <---------ANAC58<------MYB83 --------->LBD16 >ALFIN1         <----------DOF2         --------->At4g35610     <---------TOE2(3) ===========================bZIP_DOF     <---------At4g35610     --------->MYB59 ------At4g35610 --------->TOE2(3)   <-----------HVH21  --------->ARR11(3)    <---------ANAC46 ----PCF2     ------>ZmHOX2a(1)--------->ATHB12   <---------ANAC58<------MYB46(1)--------->REM1(2)   gctgtttccgtgtctcctactttaaacatatatttattgggtcatctccttggcttaagagcttaattaggttaaaccctccgtgaagaagagtctctag  5176500                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                              ------>MYB83                                              ------>MYB46(1)                                            <---------MYB59                                          -------->P                    ------>ZmHOX2a(1)   ============================HOX2a_HOX2a                    ===========================HOX2a_HOX2a                   --------->TOE2(3)    ------>ZmHOX2a(2)             <---------AHL20(2)       <---------ARR11(3)                                          ---             <---------YAB1           --------->ARR11(3)                                          <--            --------->AHL20(2)      <---------YAB1                                               ----            <---------AHL20(2) ================HOX2a_HOX2a                                       ----           --------->YAB1      ------>ZmHOX2a(1)             <------ZmHOX2a(1) --------->YAB1  <-----   tagccatcaccaattttaattccttatttcttcctcttatgatctaccaaatacaagagagaaggatagatgtgttaagactcatattggtgttcattaa  5176600            <-------TEIL           --------->CCA1(2)          --------->ARR14(2)      <------ZmHOX2a(1)                           <---------ATHB12    <---------TOE2(3)                            --------->ANAC58 ------------>AGL15                              --------->ANAC58 -------------AGL15                              --------->ANAC46 ------------->AGL1               --------->ANAC55(2)             --------->YAB1 ------------->AG   ----------->GT1   <---------YAB1    <---------YAB1        <----------DOF2  <----- ------GT1<---------ARR14(2)      <---------ANAC55(2) ----------->GT1     ------->TEIL     ----------   ccaattgaggaagatacaaaactagtataaactattaagtatcatcggtccaagcattgtgaatagaatagtaatgtatgctttgttagaaaatagttac  5176700                            --------->MYB52(2)                                              ---------                 --------->AHL20(2)                                                         ---------                 <---------AHL20(2)                                                         <--------             <---------CCA1(1)                                                              -------->ATHB1             <---------RVE1(1)                                          --------->CCA1(2)  --------->ICU4            <---------ARR11(3)     --------->TOE2(3)                   <---------ARR14(2)  <---------AHL20(2)  <---------ANAC58     <---------TOE2(3)                     --------->AHL20(2)            <---------ATHB51  <---------ANAC58     <---------TOE1(3)                  <---------AHL20(2)        ----------->GT1 --TEIL     --------->ARR11(3)   --------->ICU4  <---------YAB1        --------->ARR14(2)  --------->AHL20(2) ->GT1 <---------REM1(1)  <--------P  <---------AHL20(2) --------->AHL20(2)   <---------WOX13(1)    -   ataggcttgttgtagatatttatataaggttagtgattcttaaatttagacataatagattaaataaacaatggatatggattgactagtcaaattattg  5176800  Previous    Next  AGI:  At2g12646.1    Description:  similar to zinc-binding protein, putative [Arabidopsis thaliana] (TAIR:AT3G60670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67744.1); contains InterPro domain Protein of unknown function DUF597 (InterPro:IPR006734) Range:  from: 5174124    to: 5176267    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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