Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ------>ZmHOX2a(2)          <------ZmHOX2a(2)          <---------RVE1(1)         <---------ARR11(3)         --------->ARR14(2)         --------->ARR14(3)         <---------ARR14(2)         --------->ARR11(3)         <-----------ARR10         <---------ARR14(3)         --------->GLK1(2)        <------ZmHOX2a(1)    --------->ZAT2                --------->At4g35610    <---------At4g35610           <---------At4g35610         <----------DOF2    --------->At4g35610---------->ID1                      <---------ALFIN1     <----------DOF2 ------>ICU4<----------DOF2 <----------DOF2   --------->CCA1(2)    ------>ZmHOX2a(1)   attatcagcaggatcttttcttcttgttctctttgcagctaaaatcagagatgagttctctccactttcctctgcaattactctttctattacacttgtt  5015000                                       ----------->RAV1(2)                                       <---------LBD16                                    ------>MYB83                                    -------->P --------->WOX13(1)                                    ------>MYB46(1)                                   --------->MYB55(1)                               <---------AHL20(2)                                  --------->MYB46(3)                             --------->AHL20(2)                                  <---------MYB111(1)                            <---------AHL20(2)                        <<<<<<<<<TBF1--------->MYB46(3)                   <-----------GT1             <---------ALFIN1     --------->AtMYB61                --------->GLK1(2)--------->AHL20(2)             --------->ANAC46     <---------MYB111(2)              <---------ARR11(3)             --------->REM1(1)    <---------MYB59<---------ATHB12  --------->ARR11(3)    ----------->GT1      <<<<<<<<<TBF1<----------DOF2<---------MYB46(2)         ----------->GT1    --------->AHL20(2)  <   ctccattcttcttctacacctctttcttcttcgttaccaacccctgaatcaatcaaacacaaattgaaaaatcttataactattaaaaaaatggagaaac  5015100                       --------->ANAC46                      --------->ZAT6                     --------->MYB52(1)         <-----------ARR10                            --------->ANAC58         <---------ARR11(3)                           --------->ANAC46         --------->ARR11(3)                           --------->ANAC58                           <---         --------->GLK1(2)                        --------->AtMYB61                       <---------- ----------DOF2     -------->P             ----------->HVH21      ----------->GT1     --------->YAB1   aacttttgaaaaatctaagtcttaccagtaatcgatgttgttccagtgacgaccacaagaaacgaagagagtaaacacagagacacaagtataaacactc  5015200              ----------->RAV1(1)    <------ZmHOX2a(2)    --------->CCA1(2)    --------->At4g35610   --------->ARR11(3)   <---------ARR14(2)   <---------AGP1   <---------ARR11(3)   --------->ARR14(2)                                            <---------MYB46(3)   --------->AGP1                           --------->ZAT6     <-------GAMYB            <---------HSFB2a(2)  <---------GLK1(1)  <---------YAB1       <-----------GT1     <-----------RAV1(1)   --------->KAN4(2) -------DOF2 --------->ANAC46            <-----------GT1   <-----------GT1     ----------->GT1 -GT1------>ZmHOX2a(2)         <----------DOF2     <---------MYB52(1)          --------->ICU4------>ZmHOX2a(2)   tttgagatctgaaacacaacattatgtctggttctttttttttttaactctctgttttttttttctgttgttgttgttgtaatgtttattctcgatcgtg  5015300                                                                     <---------YAB1                                                                  <---------ARR14(2)                                                                  --------->ARR14(2)                <                                      <---------WOX13(1)          --------->GLK1(2)                 <                                    --------->ATHB12          <---------LBD16                     ---                                   <---------YAB1         ----------->HVH21                    <-----                        --------->ANAC58                 <---------WOX13(1)           --------->ATHB12                        --------->ANAC58                <---------ANAC58              --------->YAB1-                       <---------TOE1(2)--------->ATHB12<---------ANAC58             <---------ATHB12   tttgagaaacaatggggctctctctcacgttaagaacacgattgatttgagaggcattgcttgacgcggttctgtttgattcgtcgaatcatcggttttt  5015400         <---------AHL20(2)         --------->AHL20(2)     --------->ATHB12    *TSS--------->AHL20(2)               <---------AHL20(2)   <---------WOX13(1)                --------->AHL20(2) <---------ICU4                      <---------AHL20(2) --------->ATHB51                   <---------AHL20(2) --------->ATHB12                   --------->AHL20(2) ---------YAB1                      --------->AHL20(1) ---------ATHB51                    <---------AHL20(1)                                            <-- ------>TOE2(3)                 <---------AHL20(2)               ----------->GT1     ---------->DOF2 ------GT1                   ----------->GT1        <---------ICU4         --------->ZAT18   -------- -------->ICU4               <---------TOE2(3)--------------------->WRI1   <---------ZAT18 <---------   ccataattgatttaatttccaaatgcaaattaagttaatttattttttctttcaacatttcgaaaataggtttaatgtgcgcatttgtaaagttaaccaa  5015500                                      --------->YAB1                               <---------AHL20(2)                           <---------AHL20(2)                          --------->ARR11(3)                          --------->AHL20(2)                          --------->AHL20(1)                             --------->AHL20(1)                          <---------ARR11(3)                             <---------AHL20(1)                          <---------AHL20(2)                             <---------AHL20(2)                          <---------AHL20(1)                            --------->AHL20(2) <---------AHL20(2)                     --------->AHL20(2)                                <---------YAB1      --------->AHL20(1)                  --------->LBD16  --------->YAB1         <---------AHL20(1)               --------->AHL20(2)           <---------ARR11(3) --------->AHL20(2)          --------->AHL20(1)              --------->AHL20(2) -------ARR11(3) <---------ANAC46<---------YAB1           <---------ARR11(3)              <---------AHL20(2) ---->CBF  --------->ARR11(3) --------->ICU4              --------->ARR11(3)          <---------AHL20(2) --GT1 ---------->DOF2   --------->AHL20(2)   --------->YAB1        <---------YAB1    <---------YAB1-   tttcttacaaaaagatgttccgagtaaatatatttattaataagaaaatcagaagtagaatattttagttgtgattatattctcttgtataattaaatta  5015600                                                                  <-----------HVH21                                                                  <-----------TGA1                                                                 --------->TGA1a                                                                 --------->ANAC58                                                                 --------->ANAC46                                                                 ====================================bZIP_DOF                                                                 --------->ANAC58                                                                 --------->O2                                                                 --------->bZIP60(2)                                                               --------->TGA1a                                   --------->YAB1              ======================================bZIP_DOF                                  <---------YAB1               <---------O2                               <---------AHL20(2)              --------->O2                            --------->AHL20(1)                 <---------TGA1a                            <---------AHL20(2)                <------NtERF2                            --------->AHL20(2)              ----------->HVH21                           <---------AHL20(2)        <---------ANAC58                       <---------AHL20(2)            <---------ANAC58                       --------->AHL20(2)      <------NtERF2--------->DEAR3(1)         --------->AHL20(2)--------->AHL20(2) --------->LBD16------>NtERF2       --------->TOE2(3)  <---------AHL20(1) <---------RAP2.6(2)------>NtERF2 --------->ARR11(3)    < --------->YAB1        --------->AHL20(1)    --------->ANAC46<---------RAP2.6(3)          ---------->DOF2 ------>TEIL           <---------AHL20(1)   <---------LBD16--------->DEAR3(2) <---------ARR11(3)    <   cgaacataacataaatttttgttaataaaataatttatgatagttatgcggcataacttgtgccgacgcgtcacaaaacaaatctttgagaataaagact  5015700                                                           --------->AHL20(2)                                                        <--------HAHB4                                                        --------->ATHB51                                                        -------->HAHB4                                                        <---------ICU4                                                        <--------ATHB1                       <-----------GT1                  --------->YAB1                  <---------RVE1(1)                    <---------ATHB51<---------ARR11(3)                 --------->ARR11(3)      <-----------HVH21 <---------AHL20(2)                 <---------ARR11(3)    <------------AtMYB77--------->YAB1         ----------->HVH21      <---------ANAC58       --------->AHL20(2)           --------->ARR11(3)       <---------At4g35610      <---------ANAC58       --------->ICU4  --------->ARR11(3)          --       --------->At4g35610 <----------DOF2    <---------MYB52(1)--------->TOE2(3)   <---------ARR11(3) ---------MYB46(3)<---------CCA1(1)<-------TEIL        <---------YAB1  --------->GLK1(2)           -- -----------RAV1(1)   <---------AHL20(2)------->GAMYB--------->YAB1   --------->RVE1(1)            --   tgttgttggaggtgacagagatattttatcttttgggtacaactgtcccttagtttaataattaaaacttaaaaatcttgaaactaaatcttccaagttc  5015800                                                                <---------MYB52(1)                                                            --------->MYB52(1)                                                           --------->MYB55(1)              --------->GLK1(2)                            ------->GAMYB             <---------GLK1(2)                <-----------GT1  <-------GAMYB       <---------YAB1                   <---------YAB1    <---------MYB46(2)                 --------     --------->YAB1                   <-----------GT1     <---------MYB111(2)     --------->MYB59 ------->ANAC46                 <---------ANAC58          <---------MYB55(2)  --------->bZIP60(1) ------->ANAC58                 <---------ANAC58          --------->MYB46(3)  <---------REM1(1) ------->ANAC58                 <---------ANAC46          <---------MYB52(2)  <---------bZIP60(1) <--   caagtaattgtaatagattctttggtacaaactttcgtatttactattaaactgtcttcaactaccgttgtgaatttgtgatgtaaggtcgaagattatt  5015900  Previous    Next  AGI:  At2g12400.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25270.1); similar to hypothetical protein OsJ_008445 [Oryza sativa (japonica cultivar-group)] (GB:EAZ24962.1) Range:  from: 5012025    to: 5015404    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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