Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                      --------->YAB1         <<<<<<<ZML2   --------->GLK1(1)                   <---------ATHB12     --------->HSFB2a(2)                   <<<<<<<<<ARR2        <---------HSFB2a(2)        <-----------GT1 -------->YAB1   --------->WOX13(1)  --------->GLK1(2)   <---------GLK1(1)   aaacatagctatattcaaacaatcaaactatcaaatacaaatctagaacacaaaaacagaaatctgaatttacaaatctataaactttggactaagacaa  4814000                                                                               --------->ARR14(2)                                                                          --------->AtLEC2                                                                     --------->MYB52(1)                       --------->At4g35610                        --------->At4g35610                       <---------At4g35610                        <---------At4g35610        --------                  --------->ANAC46                               ------->TEIL  --------->GLK1(2)                  --------->ANAC58                            --------->ANAC46 <---------ARR14(2)                  ----------->HVH21                           --------->ANAC58 <-----------ARR10    ------->GAMYB --------->ANAC58<----------ID1              --------->ANAC58<---------CCA1(2)<----- ----------->RAV1(1)   <---------ZAT2                        <---------------------WRI1----------->RAV1(1)   ttccaacagaacataactacacgacagctaagaaaaactacaaatacaatccaaacagagaaacacgaagctaacaatgcaaatctagaccacagaaatc  4814100                                                       ----------->HVH21                                                   <----------DOF2                                                --------->GLK1(2)                                         --------->ANAC58                                         --------->ANAC46     <------ZmHOX2a(1)      ----------->GT1     <---------------AGL15<---------GLK1(2)----------->GT1                ------     ----------->GT1      --------------->AGL15--------->ARR14(2)    ---------->DOF2     --------->ANAC58 ->GLK1(1)               ----------------->AGL1<---------ARR14(2)<------ZmHOX2a(1)       --------->ANAC58 ----ATHB12          <----------DOF2     --------->ANAC58   --------->ALFIN1   ----------->HVH21    -   aagaagactgataaaaaactgttctttaccacaaggagaagacaagccagattctttccgacgaggaggagaaaagactcagtgacagagcaagcccatg  4814200                                  <---------ALFIN1                                 --------->MYB46(3)                            ------->GAMYB                           --------->MYB46(3)                          ---------->DOF2                         ------>MYB83                         ----------->RAV1(1)                         --------->MYB52(1)                         ------>MYB46(1)                       --------->MYB46(3)                       <---------MYB59                      --------->ANAC46     <---------ARR11(3)                    <---------WRKY18(1)    --------->ARR14(2)                  <---------WOX13(1)       <---------ARR11(1)                --------->ATHB12-------->P <-----------ARR10  ------>ZmHOX2a(1)--------->WRKY12        <---------ARR14(2)                                  ------ --->O2        <---------YAB1--------->At4g35610 <---------------AGL15                        ------- ---------->RAV1(2)--------->WRKY38(1)    <---------CCA1(2)                      --------->CCA1(2)   tctcctgtctctgcgtcttcattgacccaacagcaaccacttccatatctactcaaaattgaacacaaaaacagtcttgtaagagatgagaagacagaaa  4814300                                                                                     <---------TOE1(3)                                                                                     <---------TOE2(3)                                                                                   <---------WRKY12                                                                                   <---------WRKY38(1)                                                                              ------>ZmHOX2a(2)                                                                             --------->ARR14(1)                                                                             --------->CCA1(2)                                                                             <------ZmHOX2a(2)                                                                            --------->ARR14(2)                                                                            --------->ARR11(3)                                                                            <---------AGP1                                                                            --------->ARR11(1)                                                               <---------ANAC58   --------->WRKY18(1)                                                               <---------ANAC46  <-----------HVH21                                                               <---------ANAC58 --------->LBD16                                                       --------->TOE1(2)    --------->AGP1                                                       --------->TOE2(2)    <---------ARR11(3)                                                      ----------->RAV1(2)   <---------ARR14(2)      <----------DOF2     --------->CCA1(2)          --------->GLK1(2)    ----------->ARR10       --- --->DAG2                ----------->HVH21     =====================================HOX2a_HOX2a   <-- --->DOF2  ------>ZmHOX2a(1)                   <------ZmHOX2a(1)         --------->HSFB2a(2)*TSS  <--   gtgttcaactttcctactggagaccaagagacagggagagagaataagaggagagaacctgagtagcttatgtgtctagatccggtcaaggtaaacccta  4814400                                                                                                <<<<<             <---------TOE2(3)                                                                  <<<<<      --------->SPL7                                                <---------ETT(2)            <<<<<    <---------SPL7                                                  --------->ETT(2)          <------MYB83  --------->MYB59                          <---------WOX13(1)      --------->DDF1             <------MYB46(1)  <---------------AtSPL3                   <-----------TBP <---------WOX13(1)                 -------  <---------------AtSPL8              --------->CCA1(2)   <------------CBF                  <-------- ------>ARR11(3)               ----------->GT1           --------->ATHB12                  <--------- -------GLK1(2)               <---------TOE2(3)         --------->AHL20(2)  --------->YAB1--------->ATHB12 -------ARR11(3) <----------DOF2   ----------->ARR10    <---------AHL20(2) <---------YAB1<---------YAB1   gattttggtacgactagggttttttggtctatgaggtaagatttgatttatagacagattaattgctatgtcgaccgatgatagcaaatttttgattggt  4814500                                        <---------TOE1(3)                                        --------->MYB59                                        <---------TOE2(3)                                  --------->AHL20(2)                                  <---------AHL20(2)                                  <---------YAB1                             <---------AHL20(2)                                 --------->AHL20(2)                          --------->AHL20(1)                            --------->AHL20(2)                               <---------AHL20(1)     <----------DOF2   --------->AHL20(1)                                    --------->AHL20(2)  <-----------GT1      --------->AHL20(2)                                <---------AHL20(2) <<<<<WRKY43           <---------AHL20(1)                                --------->AHL20(2) <<<<<WRKY38           <---------AHL20(2)                              --------->TOE2(3) <<<<<WRKY26    <---------TOE2(3)<---------AHL20(1)                    <----------DOF2 ---->GT1<---------TOE2(3)  <---------AHL20(2)                  --------->YAB1       ---------->DOF2 -WOX13(1)      <---------TOE1(3)--------->AHL20(1)         <---------AHL20(2)  <---------TOE2(3) ---CBF  <---------TOE1(3) --------->AHL20(2)               --------->AHL20(2)<---------AHL20(2)   caattttctttatggtttaagggaataaattaaaatataatttaggttttttttgggagaaattaaaaataaactttaatttaatgtgaaagactcttaa  4814600                                                        --------->ICU4                                                   ----------->GT1                                                  <---------YAB1                                                -------->ATHB1                        --------->YAB1          --------->ATHB12                       <---------YAB1           --------->ATHB51                    <---------AHL20(2)          <---------ICU4                    --------->AHL20(1)          <---------AHL20(2)                    --------->AHL20(2)          -------->HAHB4                                   <---                   --------->AHL20(2)          --------->ICU4                                  ------               <---------AHL20(2)              <---------YAB1                                 <------               <---------YAB1                  <---------ATHB51                             -------->ATHB1             --------->YAB1                 <---------AHL20(2)                              <--------         <---------CCA1(1)                  <---------YAB1                                  ---------         <---------RVE1(1)                  --------->AHL20(2)                             --------->AHL20(2)        <---------AHL20(1)                 --------->AHL20(2)         --------->AHL20(2)   --------->AHL20(1)        --------->ARR11(3)              <---------ARR11(3)            <---------AHL20(1)   <---------AHL20(2)        <---------ARR11(3)     <-------TEIL<---------AHL20(2)         --------->AHL20(1)   --------->ICU4  <-----------GT1  <---------AHL20(2)   --------->ARR11(3)           <---------CCA1(2)     <---------YAB1   gtttatacaagatatttataattttattatagtttcatataagattttaattattgtaaaaatttgtattcatatattaagttcaaaaccaaaattatta  4814700                                                                                        <---------YAB1                                                                                      <---------ICU4                                                                                     --------->ICU4                                                      <---------AHL20(2)           <---------AHL20(2)                                               <-----------GT1                     --------->YAB1                                            <---------ICU4                         <---------AHL20(1)                                            <---------AHL20(2)                     --------->AHL20(2)                                           --------->AHL20(2)                      <---------ICU4 ------YAB1                       <---------YAB1      --------->AHL20(2)           <--------ATHB1 --->YAB1                        <----------DOF2      <---------AHL20(1)        --------->YAB1 ---YAB1                      <---------ARR11(3)     --------->AHL20(2)       <---------YAB1 -ICU4                        --------->ARR11(3) <---------YAB1            <---------YAB1<---------AHL20(2) >YAB1                  ----------->GT1    --------->ICU4         <-----------GT1 --------->ICU4   tgaacaaataccaaaacttaagtttttggttaaatctttattgtatttattaccattaaatttttgtttttctatttcttattaataatttttatttgtg  4814800                         --------->YAB1                         -------->HAHB4                      --------->YAB1                     --------------->AGL15                    <-----------------AGL3                    ----------------->AGL3                                                 <---------WOX13(1)                 <---------YAB1                                                          --------->ATHB12                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                   --------->AHL20(1)               <---------ICU4                                                           --------->AHL20(2)               --------->YAB1                    <---------AHL20(2)                     <---------AHL20(2)               <--------HAHB4                <---------YAB1                            --------->AHL20(2)               --------->ATHB12             <---------AHL20(2)                      --------->AHL20(1)              --------->ICU4                <---------AHL20(1)                      --------->AHL20(2)              <---------ATHB12              --------->AHL20(2)              --------->CCA1(2)            --------->WOX13(1)    <---------STY1(1)<-----------GT1         <---------ARR11(3)--------           <-------TEIL <---------YAB1     --------->YAB1          >>>>>>>>>GATA-1  <---------AHL20(2)      <-----------GT1<---------------AGL15<---------YAB1         ----------->GT1   --------->AHL20(2)   caaacttttaacgtccatcattactaataatagaccctagagctattataatttaactgttgaaaaatagataaatagatataaaaaaaattaattggtg  4814900  Previous    Next  AGI:  At2g11910.1    Description:  unknown protein Range:  from: 4812766    to: 4814392    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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