Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ANAC46                                                                            --------->TOE2(3)                                                                            --------->TOE1(3)                                                                      --------->YAB1                                <---------HSFB2a(2)                 --------->AHL20(2)                      ----------->GT1                               <---------AHL20(2)                      --------->ANAC55(2)                          --------->AHL20(2)    <----------DOF2           --------->AHL20(1)   --------->HSFB2a(2)            <---------AHL20(2)  --------->ANAC58 -----HVH21<---------AHL20(1)  <---------LBD16                 --------->AHL20(2)  --------->ANAC58 ->AGL1    <---------AHL20(2) <---------ANAC46           --------->YAB1     --------->YAB1        ---   acattccctatattatattttggaacgtgattttgtggaagatgggtttgaatcaatatttataaaaaattaaaataatcttaacatgccactttaatac  4625300                         --------->AHL20(1)                         <---------AHL20(2)                --------->AHL20(2)                        <--------HAHB4                     <---------AHL20(2)                        --------->AHL20(2)                --------->AHL20(2)                        -------->ATHB1                    <---------AHL20(2)                        <---------ICU4                    --------->AHL20(1)                        --------->ATHB51                  <---------AHL20(1)                        <---------AHL20(2)            --------->AHL20(2)                        --------->YAB1                <---------AHL20(2)                       <---------ATHB51           --------->ATHB51   --------->YAB1                 -                  <-----------GT1                 --------->AHL20(2)<<<<<<<<<ARR1                  <<             --------->AHL20(1)                  <---------YAB1     <<<<<<<<<ARR2               -----             --------->AHL20(2)                  --------->ICU4  --------->MYB46(3)           <------             <---------AHL20(1)                --------->YAB1  --------->YAB1               ---------       <-----------GT1 --------->ICU4         <---------YAB1   <-----------GT1           ---------->ID1 -------->GT1<---------AHL20(2)      ----------->GT1 --------->AHL20(2)         <---------AHL20(2) <<   aagttaaattttcaatttattaacaattattttgtagactcgtgatatatcattatttaatttaataacaatcgtaaactattttttttttgtcgttaac  4625400                                                                                           --------->ATHB12                                                                                           --------->AHL20(2)                                                                                           <---------ICU4                                                                                           --------->ATHB51                                                                                          --------->ICU4                                                                     --------->At5g28300  <---------YAB1                                                                  --------->LBD16       <--------ATHB1                                                            <---------ICU4              <---------ICU4                                                           <---------ATHB51             <--------HAHB4          --------->YAB1                         --------->AHL20(2) ----------->GT1     --------->YAB1         <---------YAB1                       --------->TOE1(3)   <---------LBD16       --------->ATHB51 -------->YAB1                                <----------DOF2    <---------ANAC46      --------->AHL20(2) <<<<<<<ARR1                     <---------------AGL15     <---------AHL20(2)          <---------ATHB12 ---->MYB46(3)                   --------------->AGL15  --------->AHL20(2)             --------->ICU4 ---DOF5.7(2)         --------->YAB1    ----------->GT1<---------AHL20(2) --------->GLK1(2)<---------AHL20(2) >DOF5.7(2)      <-------TEIL <----------DOF2 --------->TOE2(3) <---------LBD16        <---------ATHB51 <<<<<<<ARR2    --------->CCA1(2)--------->AHL20(2)    --------->AHL20(2) --------->ARR11(3)       --   aatcgtaaactataatagatacaattttaaaacttttatatatggtaactttaaaatataaattattccgcggtaaaatctagttttcaataattatttg  4625500                   --------->MYB52(2)                 <---------ANAC58                 <---------ANAC46            <---------ANAC58                 <---------ANAC58            <---------ANAC58                                    <---         --------->YAB1                  <---------MYB52(1)                                    <-----         -------->ATHB1                 <---------MYB52(1)                                   <-------         <--------ATHB1                <---------DEAR3(2)                                   ---------         --------->ATHB12           --------->MYB52(1)                                      <--------         <---------ICU4            ------->GAMYB                                           <---------AHL20(2)        --------->ICU4             --------->DEAR3(1)                                    <-----------TBP        <---------ATHB12          --------->MYB46(3)                ------------>CBF     --------->AHL20(2)      --------->WOX13(1)          <---------MYB55(2)               <-----------GT1       <---------AHL20(2) ---->NtERF2  <---------TOE2(3)   --------->DEAR3(2)  <-----------GT1                  ----------->TBP   ccgactatcaatcattgtggtttgtggtctggttcaaccgccggtttgcttcgaatttacaaaaactattttcaatttgattttttgatatatatatatt  4625600                                                   --------->ANAC58                                              ------>ZmHOX2a(1)                                              --------->LBD16                                            <-----------------AGL1                                            ----------->RAV1(2)                                            ----------------->AGL1                                         <----------DOF2                                        <---------HSFB2a(1)    <-----------GT1                     --------->HSFC1(2)   <-----------GT1                      <---------HSFC1(2)                  ------->TEIL ------AHL20(2)                         --------->HSFB2a(1)              --------->ANAC58 ----AHL20(2)       --------->MYB52(1) ------->TEIL--------->ANAC58      --------->ANAC46 --AHL20(2)        ----------->HVH21--------->ANAC46            --------->MYB52(1) >AHL20(1)       --------->At4g35610--------->ANAC58           *TSS      --------->ANAC58 -AHL20(1)    <---------ATHB12      --------->ANAC58    ------------------------>ANAC81      --------   ttttttttccattcccatcatctaacagagaaaacaacacgaactttcctgagacggaaaacaaaaaaacagaacacgaattttcaaagttttccacacg  4625700                      ------->PIF5                      <-------PIF5                     --------->TGA1a                     --------->ANAC58                     --------->bZIP60(2)                     --------->O2                     =====================================bZIP_DOF                     =====================================bZIP_DOF                     --------->ANAC46                     --------->ANAC58                     <---------TGA1a                     <---------O2                   <---------ALFIN1               --------->DOF5.7(2)              =================MYC_MYB              <-------GAMYB             ------>ZmHOX2a(2)             =================================HOX2a_HOX2a            ==================================HOX2a_HOX2a            <------ZmHOX2a(2)           <---------ARR11(3)          <-----------HVH21     --------->HSFB2a(2)               ------>ZmHOX2a(1)            <----------DOF2     <---------HSFB2a(2)  <---------MYB59             <----------DOF2   <----------DOF2 ->ANAC46  --------->ARR11(3) --------->ZAT6   ---------->DOF2<---------YAB1   atgtcttccataagatcgttaccacgtccctaactcttctccttcagacaaaagtactttagttattcttctttcttttgccatacttctctgaaaacag  4625800                                                                      <---------TOE1(2)                                                            <---------ARR14(3)                                                            --------->ARR14(3)                                                            --------->ARR11(3)                                                 ---------->DOF2      --------->LBD16               -                                             <<<<<<<<<<WRKY18 ===================================HOX2a_HOX2a                                             --------->ANAC58 ------>ZmHOX2a(2)                     -                                             --------->ANAC58<------ZmHOX2a(2)                     <-                                          --------->WRKY18(1)====================================HOX2a_HOX2a                 --------->WRKY18(1)  <---------ZAT14       <---------ARR14(2)                    ---                <--------ZAP1         --------->ZAT14       --------->ARR14(2)            ------>ZmHOX2a(1)              --------->MYB59       <---------ZAT14   --------->CCA1(2)     <---------AtMYB61 -------  <---------ARR11(3)                --------->ZAT14  <----------ID1  <-----------RAV1(2) --------->TOE1(3)  --------->ARR11(3)              <---------------AtSPL8    <---------ARR11(3)           --------->TOE2(3)   aataaatcttttgtattcggtcaaactgattcaaatactgtacagtcaagtcaaagctacaagatcgtgttccaggttttggtcttctcttccttaactc  4625900                                                                                               <-----                                                                                           <---------                                                                                           ---------- <---------TOE1(2)                                <-----------GT1                          <--------- -------->LBD16                          --------->YAB1                        ---------->ID1  <----- ----->ZmHOX2a(1)             ---------->DOF2<---------AHL20(1)            <---------GLK1(1)   <----- --------LBD16               <XXXXXXXXXXXXXXXXXXXXMIR773B <---------YAB1 --------->ATHB12 <---------- -------->RAV1(2)         <---------HSFB2a(2)<---------AHL20(2)        <---------WOX13(1) <---------- -->ZAT6                  --------->HSFB2a(2)--------->AHL20(2)    <----------DOF2     <----------DOF2   tcctgggttttctctaaattggtctcttctacaaaagttcgaatcaaaaaattttctgttttgatttcgcttaattgatttctcgttttctttcttttct  4626000                                                             <----------DOF2        <---------AHL20(2)                                --------->ARR11(3)        --------->AHL20(2)                                <---------ARR14(2)     <----------DOF2                                      <-----------ARR10 ----ANAC46                                               <---------ARR11(3) -DOF2 --------->AHL20(2)                    --------->GLK1(1)                                      < ----->AGL15                                 <---------GLK1(1)       --------->YAB1               <-- ------AGL15                               ========================HOX2a_HOX2a                    <-- ----ANAC58                                <------ZmHOX2a(1)------>ZmHOX2a(2)                     --- ----ANAC58                              <---------TOE2(3)--------->ARR14(2)                      --- -------AGL1                       <---------TOE1(3)      <---------AGP1                  <---------- -------AGL3   --------->LBD16     <---------TOE2(3)     <---------CCA1(2)           --------->TOE2(3)   tggaaaccttttaattccgaaattgagagttttttttagggtttaggaaatctcttactggatctttgctatagtattgaaatggaaccctaatgttgga  4626100                                                      ---------->DOF2                                               --------->ZAT14        --------->At4g35610                 --------->At4g35610   --------->MYB52(1)        <---------At4g35610             <---------ARR11(3)     --------->YAB1     ---------->DOF2                    <---------ARR14(2)    <---------YAB1 ----------DOF2                         --------->ARR11(3) --------->GLK1(2) -------HSFC1(2)                        --------->GLK1(2) <---------ARR14(2) -------HSFB2a(1)                       <-----------ARR10 --------->ARR14(2) ------>HSFC1(2)                        --------->ARR14(3)<---------ARR11(3)          --------->ATHB12 ------>HSFB2a(1)                       <---------ARR14(3)<---------GLK1(2)       ----------->GT1<--- -RAV1(1)                               --------->ARR14(2)--------->ARR11(3) <---------YAB1<---------TOE2(3)   agctttctaaagctgagtttttgtttctacaggtttagagaaaatcttctgaactcaaaagattctcataactgagtttataaatggataattgaagttg  4626200  Previous    Next  AGI:  At2g11520.1    Description:  CRCK3 (calmodulin-binding receptor-like cytoplasmic kinase 3); kinase. similar to CRCK1 (CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 1), kinase [Arabidopsis thaliana] (TAIR:AT5G58940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69293.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 4625663    to: 4628658    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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