Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <----------DOF2                                  <---------DAG2                                ------>NtERF2                             --------->DEAR3(1)                        --------->ANAC58              <---------ALFIN1 <---------ALFIN1                        --------->ANAC46           --------->PCF2   --------->PCF2                          <---------WRKY12          <-----------HVH21 --------->ANAC46                        <---------WRKY45         --------->WRKY12  ------>NtERF2                            <---------WRKY38(1)         --------->WRKY38(1)<---------TCP20                   ----------->RAV1(2)      <---------ANAC58    <---------ALFIN1                --------->YAB1                         ----      <---------ANAC46    --------->ANAC58             --------->YAB1  --------->ANAC58        <-----      <---------ANAC58    --------->ANAC46             --------->WOX13(1)                <---------MYB52(1)  <----------DOF2         --------->ANAC58            --------->MYB46(3)             ---------->ID1 ---GT1<-------GAMYB ---------->ARF1               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <----------DOF2   tctcctttgcgttgtcccaccatgtctcccgccccacctttgctacgactctaacaacaatcacatctggtccacgactctcgcattgtccctttgtctt  4597100                                                            <---------CCA1(2)                                <-------TEIL              --------->TOE2(3)        --------->ATHB12   --------->CCA1(2)              <---------DAG2       <---------YAB1     <---------ARR11(3)       <-----------GT1                              ----- ------->HVH21            --------->ARR11(3)   <----------DOF2                                ------- -----DOF2            ---------->DOF2        ------>ZmHOX2a(1)  <----------DOF2             ---------   tgacacatcttcattgtcttcttctaaagatatatacatgttcaatcctcttttttctagccttatctttttgaattttgaaaatgaactgttgtcaaca  4597200                                      ------>ZmHOX2a(1)                  --------------->AGL15                  <---------------AGL15       <------NtERF2           <---------ICU4      --------->RAP2.6(2)--------->ETT(2)                             ---------->ID1   --------->MYB52(1)    <---------ETT(2)                 --------->ZAT2 ------>ZmHOX2a(1) -->GAMYB         <----------DOF2 <-----------GT1         --------->At4g35610 -->At4g35610    ----------------->AGL2 <----------DOF2   <---------At4g35610        --------->ANAC46 >ETT(2)    <----------DOF2   --------->ICU4              <---------ZAT2 <----------DOF2       ------   gaaacaagcggcatcttttgctatatgtagacattatttcctctttcgaaccaaaaactcagctctaattttgtccttttcccttctactccaagcgttg  4597300                            <-----------ARR10                            ------->TEIL                                           --------->ANAC58                            --------->ARR14(2)                            --------->ARR11(3)                            <---------ARR11(1)                            <---------ARR11(3)    <----                            <---------TOE1(2)                          ------>NtERF2            <----        <---------ANAC58    <---------ARR14(2)       <----------DOF2   <---------RAP2.6(3)   <-------        <---------ANAC58   <---------ARR14(1)   <---------ALFIN1       <---------DDF1   <---------ALFIN1     <-----------GT1       <---------CCA1(2)   <---------REM1(2)      <---------ETT(1)<---------ALFIN1 --->ALFIN1           --------->GLK1(1)   --------->REM1(1)      <----------DOF2   --------->ANAC58   tggcaattttccgttcaacatcagaaatcgtatcttcttcgcttacatctacacactttgcatatttctttgccgacatcttgaatcgccactctccact  4597400                         <---------YAB1                        <---------ARR11(3)                        --------->ARR11(3)                  ------>MYB83                  ------>MYB46(1)                 --------->ORA47(1)                ------->GAMYB                <---------MYB111(2)                <---------MYB46(2)                --------->DEAR4(1)                <---------MYB55(2)                <---------MYB111(1)                --------->MYB46(3)                --------->DEAR3(1)               <------NtERF2               --------->MYB46(3)               --------->DEAR3(2)              --------->MYB52(1)              ------>NtERF2             --------->DEAR3(1)                            ------>ZmHOX2a(1)            --------->MYB46(3)                      ------>MYB83 <---------AHL20(2)          <-------          --------->ANAC58                         --------->ANAC46                         <--------    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------MYB111(1)                       <-------- <-----------GT1--------->DREB2C(2)              <---------At4g35610                        <-------- ------DOF2 <---------MYB55(2)     ------>ZmHOX2a(1)------>MYB46(1)   --------->ANAC46     --------->ATHB12 -----DAG2--------->ANAC46<---------ICU4         --------->At4g35610  <-----------GT1    <--------P - --ALFIN1 --------->ANAC58--------->YAB1     <---------DEAR3(2) --------->AHL20(2)      <-------GAMYB   tttttgcattcccagccaccgaccaatatcattactccttcgtccatcggtacctgccatcctctattaaatacaccattttagaatgtgggttgattgc  4597500                                                     <---------AHL20(2)                                                    --------->AHL20(2)                                                    <---------AHL20(2)   --------->YAB1                 <----------ID1    <---------AHL20(1)                              - --WOX13(1)                    ---------->DOF2  <---------YAB1                                     -- -ANAC58                 <---------MYB52(1)    ------------>CBF                              -------- ----CBF              <------------MYB.PH3(1) <-----------GT1          <----------DOF2       ------->GAMYB -ANAC58             <---------At5g28300   ----------->GT1<-----------GT1                    -------- -------->YAB1      <-----------GT1<------ZmHOX2a(1)--------->YAB1   <---------At4g35610    ---------   atttatcacaaacaaacaaatttaaccgtttttcaaaggacaaaaatgttacaataaaatttaccttcttcagcttttaatgtccccttcttcaaccaca  4597600       <---------ANAC58       <---------ANAC58 ----------->CBF                                                            <---------AHL20(1) ------->TOE2(3)                                                 <----------DOF2         xxxxxxxxxxxx ->AtMYB61                                          --------->ARR14(2)      --------->AHL20(1) ->TOE2(3)      <---------YAB1   --------->REM1(1)  <---------ARR14(2)     <---------CCA1(2) >MYB46(3)------------>CBF<-----------GT1          <---------CCA1(2)<---------CCA1(2)  <---------ZAT14   acttcaatttcgtccaatatcagtgttttctccctacatttctagttttttgcaaatctacaaacctcttttatcttatatattaagagagcagttaatg  4597700                                                                           ==========================                                                                           <---------ZAT2                                                                           ----------->RAV1(2)                                                                  <---------ICU4                                                                  --------->ATHB12         <----------DOF2                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------DAG2                                        --------->TOE2(3)    --------->TOE2(3)                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------MYB59                                         ----------->RAV1(1)    ------>ZmHOX2a(1)    <---------DAG2          <---------AHL20(2)              ===========================RAV         <-  -------->P    <---------TOE2(3)  --------->WOX13(1)   ------->MYC3      <---------ARR14(2)       --  ------>MYB46(1)       <---------AHL20(2)              <-------MYC2      --------->ARR14(2)     <---  ------>MYB83 <-----------GT1   ------------>CBF       --------->TOE1(2)<---------RAP2.6(3)   ------ <---------ALFIN1      <---------AHL20(2)               <-------MYC3     ------>NtERF2 <---------LBD16 xxxxxxxxxxx>smallRNA(fl3)  --------->AHL20(2)          ------->MYC2    --------->DEAR3(1)  <--------   gccctaccttactttattaacattttttatttaaattcaattagatagcaaatgtaaacgtgcaacatttattgccgacctgctccttcttcggaagcgc  4597800                                                                     ------->MYC3                                                                     <-------MYC3                                                                     ------->MYC2                                                               <---------LBD16            --------->GLK1(2)    ------->TEIL                        <-----------RAV1(2)  <---------ARR14(2)          <---------GLK1(2) ======RAV   <----------DOF2           <---------ATHB12      --------->ARR14(2)          <---------ARR14(2) --------At4g35610                    <-----------HVH21<---------ZAT18                <--------P ------->At4g35610                    xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            ----------->GT1 --------RAV1(2)                     --------->WOX13(1)--------->ZAT18         ---------->DOF2 ----->RAV1(1)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->LBD16--------->DAG2------- -ATERF1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->MYB59   <-------MYC2  --------->ALFIN1 -   cagatgaaactgtctctttctctaacacatactaggtcccaatcaggggtattttggtccacaattccgcatgtgttattgaaaagtggtagattccgaa  4597900                  <---------GLK1(2)               <--------P                                                                           <            <---------AtMYB61                                                                     ---        <-------GAMYB                                                                           -----       <---------MYB46(3)                        --------->ARR11(3)                            ------      <---------------AGL15                      <---------ARR11(3)                            ------     <---------ANAC58                            <---------GLK1(2)                            <------     <---------ANAC58 <---------YAB1          <--------P                                  --------->AHL20(2) <----------DOF2  --------->ARR11(3)        ----------->GT1                               <---------AHL20(2) -->LBD16 <---------MYB46(3)     <---------MYB46(3)  <-----------GT1                --------->YAB1--- -------->TOE2(3) <---------ARR11(3)       --------->ALFIN1                      --------->WOX13(1) -   aacctttgctggttgtggtagattttgaatgctagttgttagaatgtggtagattttgcgatattctctacctcttaatatgtcattcatatataaataa  4598000  Previous    Next  AGI:  At2g11462.1    Description:  contains domain Ubiquitin-like (SSF54236) Range:  from: 4596817    to: 4597460    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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