Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            --------->ARR11(3)                              <----------DOF2         <---------CCA1(2)                                <---------DAG2 --------YAB1                                          <---------ALFIN1 ------>TOE2(3)                                      -------->P -----HAHB4            <----------DOF2    --------->ARR11(3)                                   ------ ----->YAB1            <---------DAG2     <---------ARR11(3)   <---------CCA1(2)             -------- -----YAB1<---------ARR11(3)   ---------->DOF2  <---------CCA1(2)                        <---------At4g35610 --AHL20(2)      <-----------GT1     <---------YAB1 <-----------GT1                      --------->At4g35610   cattaatccacaaatcttttttctgcttttcttcaaagtctgattatcttctatctaccacttttctatcttcttctcttcacatttggactgcttcctg  4381700                                                                                                <----                                                                                            <--------                                                                                            <--------                                                                                       --------->ATHB12                                                                                       <---------ICU4                                     <----------DOF2                                 <-----------HVH21                            --------->YAB1                            --------->AHL20(2)    <-------- >ZmHOX2a(1)               <---------YAB1<---------LBD16   <-------TEIL              <-----------TGA1 --->RAV1(2)       <-----------RAV1(1)<-----------HVH21<---------TOE2(2)     --------->TOE2(3)<------   atgcatcatctattggaagttatgttgttatgataaactctttcagggagaatcacataggttgatcagcaaataaaaaccacaattcgtcattgctggt  4381800     ------>ZmHOX2a(1) <---------ARR14(2)               <---------ANAC58                                      <-------MYC2 <-----------GT1                  <---------ANAC46                                      <-------MYC3 --------->ARR14(2)          --------->CCA1(2)                               <------ZmHOX2a(1) ----P                      --------->ARR14(2)                           <---------ZAT14------->MYC3 -ANAC58              <---------WOX13(1) --------->DAG2                  --------->ZAT14------->MYC2 -ANAC58            --------->ATHB12   ---------->DOF2                 --------->ANAC46<---------ANAC58 -ANAC46<----------DOF2     <---------ARR14(2)  <-----------HVH21   ----------------->AGL1          - ---MYB46(3)        -------->HAHB4<---------ANAC58               --------->GLK1(1)     <---------ANAC58   tagtatccttcttttgagtaaatgatggacgatatggcttgaaaaggctatgtcattgcattcaacgaattccactacaggacccaagaacgtgtccatt  4381900   --------------->AtSPL8  <---------ANAC58           ----------->RAV1(2)  <---------ANAC58       <---------ANAC58                  ------->TEIL            <---------ARR11(3)  <---------ANAC46       <---------ANAC58               <---------YAB1       <-----------GT1   ------ -------->ARR11(3)<----------DOF2                <---------YAB1<----------DOF2  --------->TOE2(3)   aatgtcttgtactctatcggctttaatgcttccctggccttcaagacaattttgtttgatgaatgctttgatacccttgtaacattatctatttctctgc  4382000                                 --------------->AtSPL8                            <---------GLK1(2)                                            ------------                        <-------TEIL                                                    --------->ZAT6                        --------->ZAT14                                          --------->AHL20(2)                        <---------ZAT14                                         --------->AHL20(2)                    --------------->AtSPL3                        --------->TOE2(3)   <-----------GT1                    <---------------AtSPL3           ----------->RAV1(2)        <---------AHL20(2) >NtERF2            <---------------AtSPL8          *TSS        <-------TEIL  <----------DOF2   <----   ctagttgaaatagtcttgtagggaagtacagtttctttgtactcattttctcaaaacctgatgaaatacattaacacagtctttaaattaacacaatttt  4382100                                                                                          <---------GLK1(2)                                                                                  <---------------AtSPL3                                                                                  <---------------AtSPL8                                                                                 <------ZmHOX2a(1)                                                                               <---------TOE1(3)                  ----------->GT1                                    --------->ANAC46 <---------ZAT14 <---------ARR11(3)              <---------ANAC58                    --------->ANAC58 --------->ZAT14 --------->ARR11(3)            <---------YAB1                 <---------ICU4   <---------TOE2(3) >CBF   ----------->TBP    <------------CBF                   --------->YAB1<---------AHL20(2) ------ -----YAB1      <------------CBF <---------ANAC58 --------->YAB1     --------->ANAC58 <-------TEIL   gaatatcgttttaaaaaccattgtaaatctattgtgcttgtgtagtttcgaaacataaacacagtcattacaagtcattttaaggaagtacagtttcttc  4382200                                                  --------->ZAT6                                  ---                                           --------->AHL20(2)                                     <--                                          <---------AHL20(2)                                      ---                            --------->TOE2(3)   <-----------GT1<---------ARR11(3)                 <--               ----------->RAV1(2)        --------->AHL20(2)   --------->ARR11(3)            <------- --------->AtSPL8         <-------TEIL  <----------DOF2   <---------YAB1        ----------->GT1 -----   gtactcattttctcaaaacctgatgaaatacattaactcagtctttaaattaacacaattttgaatatcgttttaaaaaccattgtaaatctattatgca  4382300                                                                                           <--------- ---->MYC3                                                                                 ------>ZmHOX2a(1) -----MYC3                                    <----------DOF2                      --------->YAB1 ---->MYC2                           <----------DOF2                             ------>ZmHOX2a(1) -----MYC2              <---------ICU4     <------ZmHOX2a(1)                 <---------ARR11(3)     - --YAB1                 --------->YAB1   <---------TOE2(3)     <-----------GT1  --------->TOE2(3)   < -->TEIL    --------->YAB1     --------->ANAC46    <-----------GT1           --------->ARR11(3) -----   tgtgtagtttcgaaacataaacacagtcattacaagtcgttttaaggactttaaaaccccttgtaaaaccatttttaaaaatccttcataatccttttca  4382400                                            >>>>>>>>>>>>>AGL25                                         <---------------AGL15                                        ----------------->AGL3                                        <------NtERF2                                        <-----------------AGL3                                        ----------------->AGL2                                       ------>NtERF2                                       <---------RAP2.6(3)                                       --------->LBD16                                      --------->RRTF1(3)                                      --------->ANAC46                                      ------->GAMYB                                      --------->RAP2.6(2)                                      --------->RRTF1(2)                                      --------->DEAR3(1)                                      <---------ATERF1(2)                                      --------->ATERF1(2)                                      --------->RAP2.3(2)                                      --------->RAP2.3(3)                                      --------->DREB2C(2)                                     --------->MYB46(3)                                     --------->ERF1                                     --------->RAP2.3(1)                                    <---------At4g35610                                --------->ANAC46                             --------->ZAT6                               --------->ZAT18                              ------>MYB83   <---------DAG2         ---------->DOF2--------------->AGL15              -------->P   <----------DOF2    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 ------>MYB46(1) -DOF2           <---------CCA1(2)  <---------ATERF1(1)         <---------DAG2            xxxxxxxxxxx -------->ARR11(3)--------->ARR11(3)--------->At4g35610         <----------DOF2    <---------ATHB12 ---------ARR11(3)<---------ARR11(3)--------->ZAT2         <-----------GT1--------->AtMYB61         - ----->DOF2    --------->AHL20(2)  --------->DEAR3(1)    <---------ATHB12--------->MYB46(3)       <--   aagacctttttgaaattttaaatctttgaaaagcacacagccgccaaaaatagaaaccaataaaccctttttcaaaccaactctaatcaactggtaaccc  4382500                      --------->AHL20(2)             <------ZmHOX2a(2)            <---------AGP1            <---------ARR11(3)            --------->ARR14(2)            --------->ARR11(3)             --------->WOX13(1)            <---------ARR14(2)          --------->TOE2(3)            --------->GLK1(2) --------->AtMYB61    --------->ATHB12           <------ZmHOX2a(1) <---------MYB52(2)    <---------AHL20(2)     <---------ANAC55(2)<-----------GT1--------->YAB1                                              -- xxxxxxxxxxxx>smallRNA(si3)--------->TOE2(3)      --------->AHL20(2)                               <- -------->WOX13(1)--------->AHL20(2)  <---------ATHB12   <---------REM1(1)                ----------- -------ATHB12------>ZmHOX2a(2)XXXXXXXXXXXXXXXXXXXX>MIR2112-5P                      --------->MYB52(1)   atcaattaagtgaggatctataaattaaaccacaaacccaaacatcaatctatttattggtgtagtttcaaaacaaaaacccttgaaaacggttgtaaat  4382600  Previous    Next  AGI:  At2g11030.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 4377911    to: 4382052    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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