Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------TOE2(3)             <-----------GT1           <---------YAB1         <---------ICU4         --------->AHL20(2)         --------->ATHB51         -------->ATHB1         <--------HAHB4                            --------->ANAC58         --------->YAB1                      --------->YAB1        <---------ATHB51                     --------->ATHB51   <---------TOE2(3)        --------->ICU4            --------->TOE2(3)--------->ANAC46                                 <        <---------ATHB12          --------->TOE1(3)--------->ANAC58                --------->YAB1   <   gcaaatttcaattattaacattttcaatactcaaaacctttaaacaataatcgaagcaacttaactaagataaaaaaaaaaactataacaagttgaagaa  4310600                                                <---------GLK1(2)                                                <---------ARR11(3)                                                --------->ARR11(3)                                                <---------ARR14(2)               ------>NtERF2                                                --------->ARR14(3)            <---------ANAC58                                              ----------->ARR10               <---------ANAC58         <----------DOF2               --------->ALFIN1                      <---------AtMYB61        <---------DAG2            <---------RAP2.6(2)                      <----------DOF2     <-----------GT1            --------->ALFIN1<---------ARR14(3)     <-------MYC3    <-----------GT1  <---------ANAC46<---------ANAC58                  <-------MYC2 ---------AHL20(2)  <---------LBD16  <---------ANAC46                  ------->MYC3 ---------YAB1    ----------->HVH21  <---------ANAC58                  ------->MYC2               ---   tttttattacccttttggatttgacggagataagttgtggcctgtgggaagattttgaacaagtcttcatccacatgctttggtgccttcattcttcgct  4310700                                      --------->ANAC55(2)                                      --------->ANAC58                                      --------->ANAC58                                      --------->O2                                      <---------ANAC55(2)                                      <---------O2                                      <---------TGA1a                            --------->TOE1(3)                            --------->TOE2(3)             <-----------GT1                           --------->ANAC58            --------->ATHB12                           ----------->GT1             <---------ICU4                               =                           --------->ANAC58            <--------HAHB4                       ---------                          --------->SPL7               --------->YAB1                 <---------WRKY18(1)                          <-------TEIL--------->TGA1a <---------ATHB12               --------->WRKY45  <---------LBD16       <---------MYB52(1)            --------->ICU4                 --------->WRKY38(1) <---------ALFIN1      <---------DEAR3(2)    <---------ANAC58                        --------->WRKY12 ------>REM1(1)<XXXXXXXXXXXXXXXXXXXXMIR418   <---------ANAC58                      <----------DOF2  -   tcaccacgggtattggacagttcatcggtacgttaaactcacgtcttccgtcttccatcattacctcttgagacaatgctattgtctttgaccatcaagc  4310800                                                                                      <------ZmHOX2a(1)                                                                               ------>MYB83      ====                                     <<<<<<<<<TAC1              ------->TEIL   ------>MYB46(1)   ----                                   <---------ALFIN1       -------->P         ------->GAMYB<---------ZAT14                                   --------->ZAT6         ------>MYB83 --------->ANAC46  <---------ANAC46     <---------ICU4           --------->TOE2(3)           ------>MYB46(1)    ======================== ===============================HOX2a_HOX2a              ----------->RAV1(1) --------->AtMYB61  ===== ->DOF2 <-----------GT1    ----------->RAV1(1)          --------->AtMYB61  --------->ANAC58     <---- ----->ZmHOX2a(1)        ------>ZmHOX2a(2)             --------->MYB46(3)  --------->ANAC58     =====   tcctacataattacctcttgatattgatccaacatcaacactcgaacacaatacaaaaccaacacgagcctaaacacaaccaaatcgaggagcgtagagg  4310900                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                      <---------ARR14(3)      ----------->RAV1(1)                      --------->ARR11(3)   --------->ANAC46                      <---------ARR14(2)   --------->ANAC55(1)                      --------->ARR14(3)   --------->ANAC58                      --------->ARR14(2)   --------->ANAC58                    <------NtERF2       --------->ARR14(2)               --------->TGA1a        ----------->ARR10               --------->O2        --------->ANAC58           --------->ARR11(3)      --------->ANAC58          <------MYB46(1)          <------NtERF2          <------MYB83<---------ARR11(3)<---------ARR14(2)         <---------AtMYB61        ------>NtERF2 ========================bZIP_DOF--------->DEAR3(1) ------>DOF2   <---------O2  <---------At4g35610 ========================MYC_MYB <---------ANAC46 ==============================HOX2a_HOX2a <---------ANAC55(2) --ZmHOX2a(1)  <---------TGA1a<---------DEAR3(1)                                --------->MYB46(3) =============================HOX2a_HOX2a  --------->ANAC55(2) --------->AHL20(2)                   -   aaagtagaagggaggtctcgtcgggatcttcatcggcgcgcagagacgcaacatgcttcatcgaatttaaaacttgagacgacccatcgctcacttccat  4311000                                                                     <------ZmHOX2a(2)                                                                     --------->CCA1(2)                                                                    --------->AGP1                  <                                                                    <---------AGP1                  <                                                 *TSS --------->ANAC58                              <                                             ===============================HOX2a_HOX2a             <                                             <------ZmHOX2a(1)      --------->ARR14(2)           <---                                          ==================================HOX2a_HOX2a          <---                                          <------ZmHOX2a(1)         <---------ARR11(3)          -----                                          ===================================HOX2a_HOX2a      <------                                       <-----------RAV1(2)          --------->ARR11(3) --------->TOE2(2)                  --------->MYB52(1)  ==============HOX2a_HOX2a     <---------ARR14(2) --------->DEAR3(1)        ---------->DOF2               <------ZmHOX2a(2)   ------>NtERF2               --------->DEAR3(2)    --------->ANAC58                 --------->ARR11(3)  --------->RAP2.6(2)          --------->MYB46(3)    --------->ANAC58<------------MYB.PH3(1)  ================================HOX2a_HOX2a   ------>NtERF2 -------->ZAT6    <-----------GT1   <---------GLK1(1) --------->ANAC58------>ZmHOX2a(2)--------->TOE1(2)   tgccactagcaaaagcctagtaaccgattcaaattaagagatcaggaggaagaatgaagccaccatattagatctggccagaaccaaaaccgacgactgt  4311100         <---------LBD16         <---------At5g28300  <-------GAMYB                           <---------ALFIN1                            <---------ANAC46  <------NtERF2                           ----------->RAV1(1)                        <---------LBD16 <---------MYB46(3)                      --------->MYB46(3)                      ------>ZmHOX2a(1) --------->MYB55(2)                     ------>MYB46(1)                        ----------------->AG ---------ANAC46                        ------>MYB83                           ----------------->AGL1 ---------ANAC58                      <---------ALFIN1                      --------->KAN4(2) ---------DEAR3(1)          ------------>CBF     <---------YAB1            <---------GLK1(1) ---------ANAC58       <----------DOF2------->GAMYB                        <----------TaMYB80 ------DEAR3(1)    <------MYB46(1)    --------->AtMYB61                    <---------KAN4(1) ------RAP2.3(3)   <------MYB83      <---------MYB55(2)                   <---------ARR14(2) ---->ALFIN1      --------->MYB59    --------->MYB46(3)                   --------->ARR11(3) -----RAV1(1)  <---------ARR14(2)  <-----------GT1                        --------->ARR14(2)   gggcgggtgtttacggcgatttggtctttcaccaattcaaccacccacattattttagtttagtttgagaaaaatggatattcctatttcggagagagag  4311200                                                <---------ICU4                                               <---------YAB1                                             --------->YAB1                                             <---------ICU4                                             <--------ATHB1                                             <---------AHL20(1)                                             --------->AHL20(2)                                             <---------AHL20(2)                                            --------->ICU4                                          --------->YAB1                                         <---------AHL20(2)                                         --------->AHL20(2)                                        --------->AHL20(2)                                        --------->AHL20(1)                                        <---------AHL20(2)                                   <-------TEIL                                    --------->AHL20(2)                                     <XXXXXXXXX                                    <---------AHL20(2)                 --------->AHL20(2)------------                                    <---------YAB1 <-----------GT1  --------->WOX13(1)   <-----------                                   <---------AHL20(1)           --------->ANAC58        <---------TOE2(3)                                   --------->AHL20(1)           --------->ANAC58        <---------TOE1(3)            <-----------GT1        --------->AHL20(2) ----------->RAV1(1)              --------->MYB52(1)   <---------At5g28300  --------->ALFIN1<---------AHL20(1)   <---------MYB52(2)<----------DOF2   agagtcacagtgttttacaagaagaggtgatgaacaatataatttaataatttttgcaacacaactaagccaattacatttctttgaattaagggtacaa  4311300                                                                               --------->AHL20(2)                                                                            --------->AHL20(2)                                                    <---------ANAC46        --------->YAB1                                                    <----------DOF2    <---------MYB52(1)                                               <---------ANAC58       --------->TOE2(3)                                          <---------GLK1(2)           --------------->AGL15                                <---------LBD16<---------ANAC58  --------->KAN4(2)                         --------->DAG2  -------->HAHB4         --------->HSFB2a(1) XXXXXXXXXXXMIR426      ---------->DOF2 <---------YAB1          <---------KAN4(1) --->AtSPL8        ----------->GT1      --------->ICU4  <---------YAB1=============================== ----AtSPL8        <---------ZAT6      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------YAB1      ------   atttccaaaatataagaattagtgtaaaaagtgtctcggaaaatgattctcgtgccttattgttgaacattcccttaattataaaatgtaaacccttaca  4311400                                            <---------ARR11(3)                                            --------->ARR11(3)  --------->AHL20(2)             <-----           --------->TOE1(3)      --------->AHL20(2)          --------->AHL20(2)              <------           <---------MYB59        <---------AHL20(2)   <-----------GT1         --------->DEAR3(1)           --------->TOE2(3)     --------->AHL20(2) <----------DOF2            --------->TOE2(2)    --------->YAB1             --------------->AGL15--------->TOE1(3)         --------->MYB46(3) <----------DOF2        <---------YAB1----------->GT1--------->DOF5.7(2)      --------->DEAR3(2)    - ==============================================MADS_MADS      <---------AHL20(2)  <---------ANAC46  - --->REM1(1)          --------->YAB1  --------->YAB1--------->TOE2(3)    --------->AtMYB61    <------   actcttttataaacctaaaccgaagtataatttcatttaattgtaaaatctaaactttaactatttttatataaaccaaaaccgacgtataattttgctt  4311500  Previous    Next  AGI:  At2g10930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G48500.1); contains domain PTHR11566:SF10 (PTHR11566:SF10); contains domain PTHR11566 (PTHR11566) Range:  from: 4310363    to: 4311049    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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