Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->AHL20(2)                                              <---------AHL20(2)                                             <---------AHL20(2)                             ---------        ----------------------->TaNAC69(2)   <---------AHL20(1)                     <------MYB46(1)       ----------->GT1                       --------->AHL20(2)               <---------AHL20(2)  <---------AHL20(2)             --------->CCA1(2)                            --------->AHL20(2) ---------AHL20(2)            <---------TOE1(3)    <-----------GT1           <---------AHL20(2) ---->YAB1            <---------DAG2  ----------->GT1                 ----------->GT1    ------>ZmHOX2a(1) ---->AHL20(2)        <----------DOF2<---------TOE1(3)            --------->GLK1(1) <------MYB83 -----AHL20(2)     <-----------GT1   <---------TOE2(3)       ---------->DOF2 --------->AHL20(2)------ ----YAB1   <-----------GT1   <---------TOE2(3) <---------YAB1    <---------GLK1(1)--------->MYB59   atataaaaatcgttatactgtttactttatttaagatttgaggttaaattatttttcaacttaaaaagaattctgttaaaaaaatttggtcctataagat  4271700                                                                         ----------->GT1        -----                                                                 ----------->GT1        ----------->GT1                                 --------->ANAC58               --------->MYB59        <---------TOE2(3)                                 --------->ANAC58               <---------TOE2(3)      --------->MYB59                         --------->AHL20(2)               <---------AHL20(2)     <---------AHL20(1)                     <---------YAB1                       --------->AHL20(2)     <---------AHL20(2)                     <---------TOE2(3)                    <---------AHL20(1)     --------->AHL20(2)                     <---------TOE1(3)                    --------->AHL20(1)     --------->AHL20(1) >YAB1    --------->MYB52(1)   --------->MYB52(1)        --------->AHL20(2)     <---------AHL20(2) --->ARR11(3)     ------>ZmHOX2a(1)    --------->YAB1    <---------AHL20(2)     --------->AHL20(2)   ttgttttttgtcaaacggtccttaagattaaaaaaacgaaatcatatggttcaagaaaattaaatttaggtaaaatagaaaattaaatttaggtaaaata  4271800                                                                                                   <-                                                                                                  ---                                    --------->YAB1                                                <--               --------->TOE2(3)--------->ZAT6       <-----------------------TaNAC69(2)       <------         --------->AHL20(2)   ------>MYB46(1)      ----------->HVH21                          -------   --------->YAB1           <---------MYB59      ----------->GT1                              ------- ------>GT1   ----------->GT1 ------>MYB83--------->AHL20(2)              <---------YAB1      <------   gaaaattagaataaaatcgttagaatgaaacctaacactcatacttaaatagagtgacatatagaagaaaataactctgattaaaacaaaactcatttta  4271900                                                                                               ------           --------->YAB1                                                                   <--------        ---------->DOF2                                                                    ------>ZmHOX2a(2)     ------>ZmHOX2a(1)                                                                   --------->ARR11(3) --------ICU4                                                                            <---------ARR14(2) ------>AHL20(2)                                       <---------YAB1                    <---------AGP1 -------AHL20(2)                                <---------AHL20(2)                       --------->ARR14(2) ---AHL20(1)                                   <---------AHL20(2)                        <---------ARR11(3) -->AHL20(1)                      <---------------AtSPL8 ----------->GT1              <---------TOE1(2) -->AHL20(2)                --------->AHL20(2) --------->AHL20(2)                 <---------YAB1 <--- ---AHL20(2)         <---------MYB52(1)   <------ZmHOX2a(1)          --------->AHL20(2) <---------CCA1(2)   ttaattcctacaaagataaaaccattagtataaaatatagtacaggaatttaaattgatgagtgaaaaaaaaaaaatagaagttatccttggatctttga  4272000                                                                                                 ----                                                ----------->GT1                                  <---                                               <---------AHL20(2)                               -----     <XXXXXXXXXXXXXXXXXXXXMIR865-5P        <---------AHL20(2)                                   <----   <---------AHL20(2)                     --------->AHL20(2)                                    <----   <---------YAB1                         <---------AHL20(1)                               ----------   --------->AHL20(2)                     --------->AHL20(1)                              --------->ANAC58  <---------AHL20(2)                      <---------AHL20(2)                              --------->ANAC46  --------->AHL20(2)                      <---------ARR11(3)                              --------->ANAC58 --->YAB1                 <---------YAB1  --------->ARR11(3)------->GAMYB   <-----------RAV1(1) ----- --DOF2                <---------YAB1    --------->AHL20(2)<---------MYB52(2)         ----------->TBP ------YAB1       <-------TEIL       >>>>>>>>>>GT-3b       --------->MYB46(3)       <-----------TBP   tgattttaattagattgaagttcatatgatttttgtaagaaaaatatatttagttatatcaacaaacaaacaaattatctgtgggtttatataagcaatt  4272100                                                                                          --------->ANAC55(2)                                                                                 <---------AHL20(2)                                                                                 <---------AHL20(1)                                                                                 --------->AHL20(1)                                                                                --------->AHL20(2)      ---------->DOF2                                                      --------->At5g28300 ----->AHL20(2)                     <---------ANAC58                      ----------->GT1 <---------ANAC46 ------AHL20(2)                     <---------ANAC58          --------->WOX13(1)--------->YAB1 ---->AHL20(1)                <---------YAB1                <------ZmHOX2a(2)   <---------AHL20(2) -----AHL20(2)               <------------CBF    <---------ARR14(2)       ------->GAMYB   <---------ANAC55(2) -----AHL20(1)             <---------YAB1        --------->ARR14(2)       --------->TOE2(3) -->CBF              <---------AHL20(1) <---------ANAC58   --------->ARR11(3)  --------->ICU4  <----- ---->AHL20(2)    --------->AHL20(2)*TSS<---------ANAC58   <---------ARR11(3)>>>>>>>>>GT-2<---------ANAC55(1)   tattttgtaaaagtaatagataatatatgtttattgttgtttgcttaatccgatttgcgaagatcaatctctacaacggtaattatattgttatgtgtta  4272200                                                                                                    <                                                                                                   <-                                                                                                 ----                                                                                                -----                                                         --------->ALFIN1                       <----                                                       <---------ANAC58                        <-----                                                       <---------ANAC58                        <-----   --------->ARR11(3)                                  <---------ANAC46         <-----------GT1------   <---------ARR11(3)         <----------DOF2     --------->At4g35610     <---------TOE2(3)  xxxxxxxx  <---------CCA1(2)           ------>ZmHOX2a(1)   <---------At4g35610<----------DOF2      <---------ANAC46 ------GT1                 ---------->ID1         <---------ZAT2     ================================   ctacatatctatactatttttaaaaacatgtccttttacttataaaacagatagctggagtgtttccaattcttttgatgttttacaagtcttcgtggat  4272300      <---------At4g35610      --------->At4g35610     <---------MYB46(3)   <---------MYB52(1)  ------->MYC3  <-------MYC3 --------->TGA1a <---------TGA1a <---------O2 --------->O2 ======================================bZIP_DOF ---------TOE1(2)                                          <---------AHL20(2) --------ALFIN1                                           <---------AHL20(1) -->ZmHOX2a(2)                                            --------->AHL20(1) ---->PCF2               --------->ANAC58                 <---------AHL20(2) --ZmHOX2a(2)  <------MYB83 ---------->DOF2               --------->AHL20(2)                     <--- ----PCF2      <---------ANAC46                           <---------ARR11(3)                     ---- ----ARR14(2)  <------MYB46(1)                            --------->ARR11(3)                  ------- --->ARR14(2) --------->MYB59              --------->AHL20(2)    <---------ANAC58             <------ xxxxxxxxxxxxxxx>smallRNA(se3)<---------TOE2(3)          --------->AHL20(2)                 <-------- ==========bZIP_DOF      --------->ANAC58  <---------AHL20(2)    <---------ANAC58   ---------->DOF2   cccacgttggctgagttgggtttttttaagcaaaggtaattgtatttatttgccactaaatatatttgcttctacataatattaaacaaagtatattttt  4272400                   <---------MYB52(1)                --------->MYB46(3)                --------->DEAR3(2)               -------->P              --------->MYB52(1)              --------->MYB55(1)                                                      <---------YAB1             --------->MYB46(3)                                                    ----------->TGA1             <---------MYB111(1)                                                   ----------->HVH21  <---------AHL20(1)                                                              xxxxxxxxxxxxxxxxxxx  --------->ARR11(3)                                                          <---------LBD16  --------->AHL20(1)                                                      <---------ARR14(2)  <---------AHL20(2)  ----------->GT1      <---------GLK1(2)              --------->ARR14(2)<-------- ------AHL20(2)------>MYB46(1)      --------->HSFB2a(1)             ------->TEIL  xxxxxxxxxxxxxxxxxxx ----->AHL20(2)------>MYB83  <----------DOF2--------->GLK1(2)    <xxxxxxxxxxxxxxxxxxxsmallRNA(se3) -->AHL20(2) <---------MYB46(2)     <---------HSFB2a(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ---AHL20(2) <---------MYB111(2)--------->HSFB2a(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -AHL20(2)   --------->AtMYB61  <---------HSFB2a(2)     xxxxxxxxxxxxxxxxx>smallRNA(se3)   -----------   ttaatatatagcataccaaccgatgggttaactttgggaagttcggaatcttttcacaagaggctctatgcaccaagaactggggatgacgatggtgatt  4272500                                                                 <---------MYB52(2)                                                                ------>MYB46(1)                                                              <---------MYB111(1)               --------->ANAC58                               <---------MYB59               <---------TOE2(3)                           <-----------GT1               --------->ANAC58                       --------->AHL20(2)            <---------ATHB12                         <---------AHL20(1)          --------->WOX13(1)                         --------->AHL20(1)   <---------AHL20(2)  --------->ANAC46                                   --------->AHL20(2)   <---------YAB1  --------->ANAC58                                   <---------AHL20(2)<----------DOF2  --------->ANAC58                                --------->AHL20(2)  --------->TOE2(3) <xxxxxxxxxxxxxxxxsmallRNA(s)                     <---------AHL20(2)  <---------DAG2 xxxxx>smallRNA(fl3)                             --------->AHL20(2) -------->P            <---------TOE1(2) -YAB1 --------->ANAC58                <-----------GT1<---------AHL20(2)  --------->AHL20(2) xxxx>smallRNA(fl3)        <---------CCA1(2)     <---------AHL20(2)<-----------GT1        <---------TOE2(2) >GT1  --------->ANAC58 ------>ZmHOX2a(1)      --------->TOE2(3)------>MYB83  <-----------GT1   <----   atccaaggcaaacaatcaaggaagtcctcacatcttctgatatactattcattaatttattttacctactaacctttttattacatttttcatatgttta  4272600  Previous    Next  AGI:  At2g10830.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 4272136    to: 4273569    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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