Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               <-------                                                             <---------YAB1                  --------                                                             --------->ICU4                 <-------TEIL                                                             <---------ATHB12           <------------      --------->YAB1                                    --------->ANAC46           --------->ANAC46   --------->GLK1(1)   <------NtERF2                    --------->ANAC58           --------->ANAC58   <---------GLK1(1)  <---------SPL7                    --------->ANAC58           --------->ANAC58 ------->ANAC58      <---------ANAC58               <----------DOF2             --------->ZAT18 ------->ANAC58      <---------ANAC58            <---------ARR11(3)           <---------At4g35610 ---TEIL             <---------ANAC46            --------->ARR11(3)           --------->At4g35610 -TOE1(2)---------->DOF2                     <------ZmHOX2a(1) <---------GLK1(2)<---------ZAT18   caaggaaatcagaaagggttttggcgtagggtttatgaaattcaccaggaagagctttaagccatgattcttctactaagagctcactcaatggtacgta  4103600                                                                                        ---------->DOF2                                                                                      ---------------                         ------->GAMYB                                                <--------------     <---------ANAC58  -------->P                                                 --------->AHL20(2)     <---------ANAC58  ------>MYB46(1)                                         --------->WOX13(1) --ANAC55(2)           ------>MYB83                                         --------->ANAC58 ->ANAC55(2)      <-----------GT1                   --------->TOE2(3)       --------->ANAC46 ---AtSPL8  ----------->GT1                         --------->TOE1(3)       --------->ANAC58     ----   gcagtttccttgagttgtaatttccaacccaaaatcaattcaaaatcgcaaaacccttaatgggggaaacaatatgacaagcaattaactaaaagaagga  4103700                                                                                            ---------                                                                                           ----------                                                                                       <------NtERF2                                                                                       --------->ATERF1(1)                                                                           --------->HSFB2a(2)                               --------->ANAC46                            <---------HSFB2a(2)                      ----------->HVH21                          ------>NtERF2        ------>NtERF2                 <----------DOF2                                <----------ID1      <------NtERF2                <---------ANAC58                --------->ARR14(2)       <xxxxxxxxxxxxxxxxsmallRNA(i) >AGL15    <----------DOF2    <---------LBD16   <---------ARR14(2)<------NtERF2<---------GLK1(1) -AGL15   <---------DAG2   <-----------HVH21  ----------->GT1   --------->ETT(2)  <---------DEAR3(1)< ------->GT1    <---------ANAC58      --------->MYB52(1)        <---------ETT(2)  ---------->CDC5 <--   agaaaaaacaaaccttttgcttttgtgaccttcacggagcaaacggcgaggttactcttggacttggcgacaaacttgtggaactcggcgcgagcgacct  4103800                                                         <------NtERF2                                                         --------->ATERF1(1)                                                        ------>NtERF2                                                        <---------RAP2.3(1)                                                        <---------ATERF1(1)                                                        <---------ORA47(2)                                                        <---------ERF1                            <--                                                        <---------DEAR4(2)                        ---                                                       <---------ANAC46                          <---                                                       --------->ATERF1(2)                      -----                                                       <---------DEAR3(1)                       <----                                                       <---------RAP2.6(2)                     ------                                        <---------DOF5.7(2)                                   <------                                        ------------>AtMYB77                                  -------                                        --------->MYB52(1)                                   <-------                                <---------ZAT14        <---------RAP2.3(2)                  <--------                                --------->ZAT14        <---------RAP2.3(3)                  ---------                             --------->ATERF1(1)      --------->ATERF1(1)                 <---------SPL7                            <---------SPL7            <---------ABI4(1)                  ------>ZmHOX2a(2)                            ------>NtERF2   <-----------HVH21                            ============                            <---------ATERF1(1)      <---------ATERF1(1)               <---------ARR14(2)    --------->ALFIN1       --------->DEAR3(1)--------->ARR14(2)                        --------->ARR14(2)    <---------REM1(1)      ----------->HVH21--------->At5g28300                        <-------------  <---------At4g35610      --------->ETT(2)----------->GT1<---------ANAC46         --------->ANAC55(2)  --------->At4g35610   <---------DEAR3(1)<------------MYB.PH3(1)                  <---------ANAC55(2) >ZAT18              --------->ATHB12   ------------>MYB.PH3(1)                    --------->ANAC46 ->HVH21    <-----------RAV1(2) --------->ZAT18   <---------O2                    <---------LBD16---- -----------RAV1(2)  --------->YAB1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       --------->MYB52(1)<- ---------HVH21     <---------ATHB12<---------ZAT6--------->ANAC46              <---------ATHB12-----   gttcaggtgtaaggccagacgaatcatcggcgaccgcagtggtaacggttacacgaggcggcgagtttgctacagaacccaaatcacgggatcgtccggc  4103900         ------>NtERF2         --------->LBD16        <---------ANAC46        --------->ALFIN1        <---------DEAR3(1)       <---------LBD16       <------NtERF2      <---------DEAR4(2)     <---------RAP2.3(2)     <---------RAP2.3(3)     <---------DEAR3(1)    --------->ATERF1(1)   <---------ATERF1(1) ----NtERF2 ------>ATERF1(1) ------ATERF1(1) ------>HVH21 -----DEAR3(1) --->ATERF1(1) ---ATERF1(1) -->LBD16<---------MYB46(3)                                                            <---------ETT(2) --DEAR3(1)                                                                            --------->ETT(2) -LBD16--------->ATERF1(1)                           <-----------RAV1(2)              <------NtERF2 >SPL7<---------RAP2.3(1)                       <---------MYB52(1)                  --------->ALFIN1 =========================HOX2a_HOX2a--------->HSFC1(2)<------MYB83               <---------ANAC58 -----SPL14  ---------->DOF2         <---------HSFC1(2)<------MYB46(1)            <---------ANAC58 -->NtERF2<------NtERF2   >>>>>>>>>TBF1         --------->ALFIN1          <---------TOE1(3)  -------- --------ANAC46       <------ZmHOX2a(1)<----------DOF2 ----------->GT1 <---------MYB52(1)    -------- ---->DEAR3(1)     <------ZmHOX2a(1) <---------HSFB2a(1)  ----------->GT1 <---------TOE2(3)----------   gacggagacggcggggaaagaggaggaagaagaaggggaagctttgagacgtttggcaggttgaaaaaaatccattagggttttaggtgtcgacaaagcc  4104000                                          <---------AHL20(2)                                       <-                                    <---------TOE1(2)                                             ---                                 ------>ZmHOX2a(2)                                               <---                                <------ZmHOX2a(2)                        --------->DAG2----------->GT1       <---------HSFB2a(2)     <---------ARR11(3)                  --------------->AGL15         <--- ->ANAC58                      --------->ARR11(3)                  <---------------AGL15         <--- ->ANAC58                     --------->GLK1(1)      <---------AHL20(2) ---------->DOF2<---------ZAT6 >DOF2 --------->HSFB2a(2)    <---------GLK1(1) <---------YAB1    ----------------->AGL3        <----   atctccgtttcagaagtgaatcagtctctatgagatcccagttttttattctcatttttttttgtgtttcccaaaaaagtttcagagaagagttaaatgg  4104100                               --------->ARR11(3)                               <---------ARR11(3)                                <---------WOX13(1)                              <---------At4g35610                               <------------CBF     <---------At5g28300   <------ZmHOX2a(1)                                   --------->ATHB12    --------->MYB52(1)   <---------TOE2(3)                                     <---------ICU4 -----NtERF2             <---------TOE1(3)                   ------------>CBF  --------->ATHB51 ------>LBD16        <-------GAMYB                          <------ZmHOX2a(1) <---------YAB1 ------ANAC46       <---------DEAR3(2)                  ---------->DOF2       --------->ICU4 ------ANAC58      <---------DEAR3(1)               ----------->GT1      --------->ANAC46     <------ ------ANAC58     ----------------->AGL1        <-----------GT1        --------->ANAC46     <-------- -----LBD16       <-----------------AGL1      <---------AHL20(2)       <---------ALFIN1 <---------YAB1   cgggaataacggtggtataggccggttaaggaagctcttcaggccgatttaaactggttaaaggacaatttgcacacctcataattggtttttattacca  4104200                                <-----------GT1                    -------->ATHB1                    <---------ICU4                   --------->AHL20(2)                   <---------AHL20(2)  --------->AHL20(2)                   <---------YAB1  --------------->AGL15                   --------->AHL20(1)------>MYB83                --------->AHL20(2) <---------MYB59                <---------AHL20(2)----------------->AG               --------->AHL20(2) ----------------->AGL3           --------->YAB1          <-----------TBP  <---------AHL20(2)        <---------ARR11(3)          <---------AHL20(2)--------->AHL20(2)       --------->ARR11(3)          --------->AHL20(2)<---------AHL20(2)      --------->CCA1(1)        <-----------TBP<---------AHL20(2)<---------AHL20(2)        --------------->AGL15      <-----------TBP <---------YAB1 ------>MYB46(1)--------->RVE1(1) --------->ARR14(2)      <---------AHL20(2)--------->AHL20(2)     --------->YAB1      --------->TOE2(3)      --------->AHL20(2)<---------AHL20(2)     --------->ANAC55(2)----------------->AG    <-----------TBP--------->ICU4 =================================================MADS_MADS     ----  --------------->AGL15--------->AHL20(2)--------->AHL20(2)      -------->P        --------->TOE2(3)  =================================================MADS_MADS    <-----------GT1    --------->TOE1(3) ---YAB1--------->AHL20(2) <---------AHL20(1)  --------->ANAC46 --------->MYB52(1)----------->RAV1(2) ---GT1 <---------AHL20(2) --------->AHL20(2) <-------TEIL    <---------MYB52(2)<-----------GT1 -----   ttttctatatatatatataaaattattaatttaattaccaaatttatatacataatatctctaaactaaccatatttgttatttacctgaactaatttcc  4104300                                                                      <---------AHL20(2)                                                                      --------->AHL20(2)            <                                                                     --------->AHL20(2)             -                                                                 <---------AHL20(2)              <---                                                         ------>ZmHOX2a(2)                      <----          <---------MYB59                              <---------ARR11(3)        <---------AHL20(2)<-          --------->TOE2(3)   <---------YAB1    --------->AHL20(1)   <---------AHL20(2)         <----     <----------DOF2       --------->AHL20(1)   <---------ARR11(3)   <---------AHL20(1)         -----    <---------ICU4--------->ANAC58              --------->ARR11(3)   --------->AHL20(1)         -----  --------->ARR11(3)      --------->AHL20(2)    <---------AHL20(1)  <---------------AGL15   ---------  <---------ARR11(3)--------->YAB1           <---------AHL20(2)  --------->AHL20(2)         <-------- -->ZmHOX2a(1)    --------->ANAC58           --------->AHL20(2) --------->AHL20(2)    --------->AHL20(2) ---->TOE2(3)  <---------ATHB12    <---------AHL20(2)  --------->ARR11(3)        --------->AHL20(2)--   taaacatctttacctaaatcaagcataaatatatgatttttttttaaaaaaatatttgatcttatatttaatttatttagaatttatataaaatataaat  4104400         --------->AHL20(1)         --------->AHL20(2)       <---------AHL20(2)       --------->AHL20(1)       <---------AHL20(1)       --------->AHL20(2)    --------->AHL20(1)    <---------AHL20(1)    <---------AHL20(2)    --------->AHL20(2) ---------AHL20(2) -------->AHL20(2) ------ICU4 -----AHL20(2) --------YAB1          <---------TOE2(3)            --------->AHL20(1) -----ATHB51--------->AHL20(1)           <---------AHL20(2)                       --------->ZAT18 ---->AHL20(2)   <---------AHL20(2)      --------->AHL20(2)                      xxxxxxxxxxxxxxxx>smallRNA(s) ---->ICU4  <---------AHL20(1)       <---------AHL20(2)                      xxxxxxxxxxxxxxxxxxx>smallRNA(si3) >AHL20(2)  <---------AHL20(2)       --------->AHL20(2)        <---------ATHB12 <---------------AtSPL8 -AHL20(2)<---------YAB1            --------->AHL20(2) <---------YAB1       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------->ICU4  <---------AHL20(2)   <---------AHL20(2) <---------AHL20(2)  --------->AHL20(2)  <-----   aattaataaaatattatatttttttgatgtaattcaaatttttttaaatagacatatattattcaatcgatatgaaataatatgtgtacaatgtcccata  4104500  Previous    Next  AGI:  At2g10550.1    Description:  uracil DNA N-glycosylase. similar to uracil DNA glycosylase family protein [Arabidopsis thaliana] (TAIR:AT3G18630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15386.1); contains InterPro domain Uracil-DNA glycosylase, not poxvirus; (InterPro:IPR003249) Range:  from: 4103083    to: 4104002    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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